RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 NAP1L5Q96NT1 182 aaPredicted RBP12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TNNQ9UQP3 1299 aa12.43□□□□□ -0.42
CHCHD4P3-201ENST00000455954 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TRIM27P14373 513 aa12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 SPG7Q9UQ90 795 aa12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 RRP7AQ9Y3A4 280 aaKnown RBP12.42□□□□□ -0.42
CHCHD4P3-201ENST00000455954 CCDC173Q0VFZ6 552 aa12.41□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PLEKHF1Q96S99 279 aa12.41□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PPP1R9BQ96SB3 815 aa12.41□□□□□ -0.42
CHCHD4P3-201ENST00000455954 IGSF1Q8N6C5 1336 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 BTAF1O14981 1849 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 GOLGA6L22H0YM25 854 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 CYP27B1O15528 508 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 PANK2Q9BZ23 570 aa12.4□□□□□ -0.42
CHCHD4P3-201ENST00000455954 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 ITPRIPQ8IWB1 547 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 SSH1Q8WYL5 1049 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 TNPO1Q92973 898 aaKnown RBP12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 BCL2L13Q9BXK5 485 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 STK32BQ9NY57 414 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
CHCHD4P3-201ENST00000455954 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 SLC27A3Q5K4L6 730 aa12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 CHD1LQ86WJ1 897 aa12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 TRIM35Q9UPQ4 493 aa12.38□□□□□ -0.43
CHCHD4P3-201ENST00000455954 LRP5O75197 1615 aa12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 K7ELQ4 463 aaPredicted RBP12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 IL13P35225 146 aa12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 IFNL2Q8IZJ0 200 aa12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 KAT6BQ8WYB5 2073 aa12.37□□□□□ -0.43
CHCHD4P3-201ENST00000455954 PHKG2P15735 406 aa12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 KLHL40Q2TBA0 621 aa12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 PLEKHO1Q53GL0 409 aaPredicted RBP12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 MPRIPQ6WCQ1 1025 aa12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 TMEM57Q8N5G2 664 aa12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 LRRC4BQ9NT99 713 aa12.36□□□□□ -0.43
CHCHD4P3-201ENST00000455954 ZNF445P59923 1031 aa12.35□□□□□ -0.43
CHCHD4P3-201ENST00000455954 AMOTQ4VCS5 1084 aa12.35□□□□□ -0.43
CHCHD4P3-201ENST00000455954 SULT6B1Q6IMI4 303 aa12.35□□□□□ -0.43
CHCHD4P3-201ENST00000455954 AEBP1Q8IUX7 1158 aa12.35□□□□□ -0.43
CHCHD4P3-201ENST00000455954 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
CHCHD4P3-201ENST00000455954 DIAPH1O60610 1272 aaKnown RBP12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 NUCB2P80303 420 aa12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 RABEP1Q15276 862 aa12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 SPON1Q9HCB6 807 aa12.34□□□□□ -0.43
CHCHD4P3-201ENST00000455954 KDRP35968 1356 aa12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 CDC45O75419 566 aa12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 SMARCC1Q92922 1105 aaPredicted RBP12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TSR2Q969E8 191 aaKnown RBP12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 MAP7D2Q96T17 732 aa12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 KIF2CQ99661 725 aa12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
CHCHD4P3-201ENST00000455954 LY75O60449 1722 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 KCNQ4P56696 695 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PIGBQ92521 554 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PDGFDQ9GZP0 370 aaPredicted RBP12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TMOD3Q9NYL9 352 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PAPPAQ13219 1627 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ABCC4O15439 1325 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TOGARAM1Q9Y4F4 1720 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 OFD1O75665 1012 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 FCHSD2O94868 740 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 CWC22Q9HCG8 908 aaKnown RBP12.31□□□□□ -0.44
CHCHD4P3-201ENST00000455954 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 HMOX1P09601 288 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 MCM5P33992 734 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms