RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 ANKRD31Q8N7Z5 1873 aa23.32■■□□□ 1.32
UBE2F-218ENST00000454786 POLRMTO00411 1230 aaKnown RBP23.31■■□□□ 1.32
UBE2F-218ENST00000454786 DALRD3Q5D0E6 543 aaKnown RBP23.31■■□□□ 1.32
UBE2F-218ENST00000454786 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
UBE2F-218ENST00000454786 USPL1Q5W0Q7 1092 aa23.3■■□□□ 1.32
UBE2F-218ENST00000454786 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
UBE2F-218ENST00000454786 TOMM70O94826 608 aa23.29■■□□□ 1.32
UBE2F-218ENST00000454786 CYP19A1P11511 503 aaPredicted RBP23.29■■□□□ 1.32
UBE2F-218ENST00000454786 SLC39A6Q13433 755 aa23.29■■□□□ 1.32
UBE2F-218ENST00000454786 C9orf131Q5VYM1 1079 aa23.29■■□□□ 1.32
UBE2F-218ENST00000454786 DICER1Q9UPY3 1922 aaKnown RBP23.28■■□□□ 1.32
UBE2F-218ENST00000454786 BCORQ6W2J9 1755 aa23.28■■□□□ 1.32
UBE2F-218ENST00000454786 TM4SF1P30408 202 aa23.28■■□□□ 1.32
UBE2F-218ENST00000454786 MTHFSDQ2M296 383 aaKnown RBP23.28■■□□□ 1.32
UBE2F-218ENST00000454786 CHRNA5P30532 468 aa23.27■■□□□ 1.32
UBE2F-218ENST00000454786 IFFO2Q5TF58 517 aa23.27■■□□□ 1.32
UBE2F-218ENST00000454786 NMRK2Q9NPI5 230 aa23.27■■□□□ 1.32
UBE2F-218ENST00000454786 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
UBE2F-218ENST00000454786 COL11A2P13942 1736 aaPredicted RBP23.27■■□□□ 1.32
UBE2F-218ENST00000454786 APLP1P51693 650 aa23.26■■□□□ 1.31
UBE2F-218ENST00000454786 CC2D1BQ5T0F9 858 aaKnown RBP23.26■■□□□ 1.31
UBE2F-218ENST00000454786 VSIG10Q8N0Z9 540 aa23.26■■□□□ 1.31
UBE2F-218ENST00000454786 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
UBE2F-218ENST00000454786 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
UBE2F-218ENST00000454786 ARFGEF2Q9Y6D5 1785 aa23.24■■□□□ 1.31
UBE2F-218ENST00000454786 RNF181Q9P0P0 153 aa23.24■■□□□ 1.31
UBE2F-218ENST00000454786 NFIXQ14938 502 aa23.23■■□□□ 1.31
UBE2F-218ENST00000454786 KDM2BQ8NHM5 1336 aa23.23■■□□□ 1.31
UBE2F-218ENST00000454786 FER1L6Q2WGJ9 1857 aa23.23■■□□□ 1.31
UBE2F-218ENST00000454786 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
UBE2F-218ENST00000454786 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
UBE2F-218ENST00000454786 TTC5Q8N0Z6 440 aa23.22■■□□□ 1.31
UBE2F-218ENST00000454786 RBM46Q8TBY0 533 aaKnown RBP23.21■■□□□ 1.31
UBE2F-218ENST00000454786 BCL2L12Q9HB09 334 aa23.19■■□□□ 1.3
UBE2F-218ENST00000454786 CARMIL3Q8ND23 1372 aa23.18■■□□□ 1.3
UBE2F-218ENST00000454786 U2SURPO15042 1029 aaKnown RBP23.18■■□□□ 1.3
UBE2F-218ENST00000454786 STARD3NLO95772 234 aa23.18■■□□□ 1.3
UBE2F-218ENST00000454786 SERPINB2P05120 415 aa23.18■■□□□ 1.3
UBE2F-218ENST00000454786 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
UBE2F-218ENST00000454786 TEFQ10587 303 aa23.18■■□□□ 1.3
UBE2F-218ENST00000454786 GAS2L2Q8NHY3 880 aa23.18■■□□□ 1.3
UBE2F-218ENST00000454786 ZC3H4Q9UPT8 1303 aaKnown RBP23.17■■□□□ 1.3
UBE2F-218ENST00000454786 HEG1Q9ULI3 1381 aa23.16■■□□□ 1.3
UBE2F-218ENST00000454786 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
UBE2F-218ENST00000454786 RASSF7Q02833 373 aa23.16■■□□□ 1.3
UBE2F-218ENST00000454786 A0A087WZG4 1122 aa23.15■■□□□ 1.3
UBE2F-218ENST00000454786 EIF5P55010 431 aaKnown RBP23.15■■□□□ 1.3
UBE2F-218ENST00000454786 LAMB4A4D0S4 1761 aa23.14■■□□□ 1.3
UBE2F-218ENST00000454786 DLG5Q8TDM6 1919 aa23.14■■□□□ 1.3
UBE2F-218ENST00000454786 FSTL1Q12841 308 aa23.14■■□□□ 1.29
UBE2F-218ENST00000454786 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.29
UBE2F-218ENST00000454786 ZNF790Q6PG37 636 aa23.14■■□□□ 1.29
UBE2F-218ENST00000454786 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
UBE2F-218ENST00000454786 BICDL1Q6ZP65 573 aa23.13■■□□□ 1.29
UBE2F-218ENST00000454786 C2CD5Q86YS7 1000 aa23.13■■□□□ 1.29
UBE2F-218ENST00000454786 TTLL6Q8N841 843 aa23.13■■□□□ 1.29
UBE2F-218ENST00000454786 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
UBE2F-218ENST00000454786 LMNB1P20700 586 aa23.12■■□□□ 1.29
UBE2F-218ENST00000454786 IL17REQ8NFR9 667 aa23.12■■□□□ 1.29
UBE2F-218ENST00000454786 RRAGCQ9HB90 399 aa23.12■■□□□ 1.29
UBE2F-218ENST00000454786 SLX4Q8IY92 1834 aa23.12■■□□□ 1.29
UBE2F-218ENST00000454786 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
UBE2F-218ENST00000454786 H0YIN7 160 aa23.11■■□□□ 1.29
UBE2F-218ENST00000454786 DNAJC5GQ8N7S2 189 aa23.11■■□□□ 1.29
UBE2F-218ENST00000454786 ZNF330Q9Y3S2 320 aaPredicted RBP23.11■■□□□ 1.29
UBE2F-218ENST00000454786 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
UBE2F-218ENST00000454786 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
UBE2F-218ENST00000454786 TBC1D9BQ66K14 1250 aa23.09■■□□□ 1.29
UBE2F-218ENST00000454786 CFAP53Q96M91 514 aa23.08■■□□□ 1.29
UBE2F-218ENST00000454786 NPM2Q86SE8 214 aaKnown RBP23.07■■□□□ 1.28
UBE2F-218ENST00000454786 SMC1BQ8NDV3 1235 aa23.07■■□□□ 1.28
UBE2F-218ENST00000454786 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
UBE2F-218ENST00000454786 GLTPD2A6NH11 291 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 NFKBIEO00221 500 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 PRKAR2BP31323 418 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 PDE6BP35913 854 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 PRELPP51888 382 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
UBE2F-218ENST00000454786 HTRA3P83110 453 aa23.05■■□□□ 1.28
UBE2F-218ENST00000454786 PRR5LQ6MZQ0 368 aa23.05■■□□□ 1.28
UBE2F-218ENST00000454786 BRIP1Q9BX63 1249 aa23.05■■□□□ 1.28
UBE2F-218ENST00000454786 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
UBE2F-218ENST00000454786 PCNTO95613 3336 aa23.05■■□□□ 1.28
UBE2F-218ENST00000454786 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
UBE2F-218ENST00000454786 BTBD11A6QL63 1104 aa23.04■■□□□ 1.28
UBE2F-218ENST00000454786 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
UBE2F-218ENST00000454786 KLRG1Q96E93 195 aa23.04■■□□□ 1.28
UBE2F-218ENST00000454786 CNBD1Q8NA66 436 aa23.03■■□□□ 1.28
UBE2F-218ENST00000454786 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
UBE2F-218ENST00000454786 NUP98P52948 1817 aa23.03■■□□□ 1.28
UBE2F-218ENST00000454786 NPHP1O15259 732 aa23.02■■□□□ 1.28
UBE2F-218ENST00000454786 CAMTA2O94983 1202 aa23.02■■□□□ 1.28
UBE2F-218ENST00000454786 A1BGP04217 495 aa23.02■■□□□ 1.28
UBE2F-218ENST00000454786 VEGFAP15692 232 aaPredicted RBP23.02■■□□□ 1.28
UBE2F-218ENST00000454786 SETDB2Q96T68 719 aa23.02■■□□□ 1.28
UBE2F-218ENST00000454786 SCN4AP35499 1836 aa23.01■■□□□ 1.27
UBE2F-218ENST00000454786 CCDC24Q8N4L8 307 aa23.01■■□□□ 1.27
UBE2F-218ENST00000454786 NUDCQ9Y266 331 aa23.01■■□□□ 1.27
UBE2F-218ENST00000454786 KCNQ3O43525 872 aa23■■□□□ 1.27
UBE2F-218ENST00000454786 ST5P78524 1137 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms