RNA–Protein interactions for RNA: ENST00000454444.1

AC007879.2-201, humanhuman

TSL 4 BASIC

Gene AC007879.2, Length 551 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.2-201ENST00000454444 VSIG10Q8N0Z9 540 aa10.53□□□□□ -0.72
AC007879.2-201ENST00000454444 GAS2L2Q8NHY3 880 aa10.53□□□□□ -0.72
AC007879.2-201ENST00000454444 TEX13AQ9BXU3 409 aaPredicted RBP10.53□□□□□ -0.72
AC007879.2-201ENST00000454444 SOS1Q07889 1333 aaPredicted RBP10.53□□□□□ -0.72
AC007879.2-201ENST00000454444 H0YIN7 160 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 SERPINB2P05120 415 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 NFIXQ14938 502 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 RBM46Q8TBY0 533 aaKnown RBP10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 CFAP53Q96M91 514 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 ZBTB1Q9Y2K1 713 aa10.52□□□□□ -0.73
AC007879.2-201ENST00000454444 C4AP0C0L4 1744 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 C2CD5Q86YS7 1000 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 TTLL6Q8N841 843 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 RRAGCQ9HB90 399 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 COL15A1P39059 1388 aa10.51□□□□□ -0.73
AC007879.2-201ENST00000454444 FSTL1Q12841 308 aa10.5□□□□□ -0.73
AC007879.2-201ENST00000454444 ZNF622Q969S3 477 aaKnown RBP eCLIP10.5□□□□□ -0.73
AC007879.2-201ENST00000454444 NUDCQ9Y266 331 aa10.5□□□□□ -0.73
AC007879.2-201ENST00000454444 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
AC007879.2-201ENST00000454444 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 LMNB1P20700 586 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 PDE6BP35913 854 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 ZNF790Q6PG37 636 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 FMNL2Q96PY5 1086 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
AC007879.2-201ENST00000454444 N4BP2Q86UW6 1770 aaPredicted RBP10.48□□□□□ -0.73
AC007879.2-201ENST00000454444 SMC1BQ8NDV3 1235 aa10.48□□□□□ -0.73
AC007879.2-201ENST00000454444 ZNF496Q96IT1 587 aaPredicted RBP10.48□□□□□ -0.73
AC007879.2-201ENST00000454444 SETDB2Q96T68 719 aa10.48□□□□□ -0.73
AC007879.2-201ENST00000454444 ZC3H4Q9UPT8 1303 aaKnown RBP10.48□□□□□ -0.73
AC007879.2-201ENST00000454444 BTBD11A6QL63 1104 aa10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 NEFMP07197 916 aa10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 VEGFAP15692 232 aaPredicted RBP10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 EIF5P55010 431 aaKnown RBP10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 RASSF7Q02833 373 aa10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 TBC1D2BQ9UPU7 963 aa10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
AC007879.2-201ENST00000454444 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 IL6STP40189 918 aaPredicted RBP10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 ST5P78524 1137 aa10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 IL17REQ8NFR9 667 aa10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 BCL2L12Q9HB09 334 aa10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
AC007879.2-201ENST00000454444 KCPQ6ZWJ8 1503 aa10.46□□□□□ -0.74
AC007879.2-201ENST00000454444 KIF13BQ9NQT8 1826 aa10.46□□□□□ -0.74
AC007879.2-201ENST00000454444 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 HEG1Q9ULI3 1381 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 PRKAR2BP31323 418 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 TBC1D9BQ66K14 1250 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 CNBD1Q8NA66 436 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 ZNF652Q9Y2D9 606 aa10.45□□□□□ -0.74
AC007879.2-201ENST00000454444 CARMIL3Q8ND23 1372 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 NPC1L1Q9UHC9 1359 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 C21orf2O43822 256 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 A1BGP04217 495 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 DNAJC5GQ8N7S2 189 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 KLRG1Q96E93 195 aa10.44□□□□□ -0.74
AC007879.2-201ENST00000454444 MRC1P22897 1456 aa10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 HTRA3P83110 453 aa10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 PRR5LQ6MZQ0 368 aa10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 NBPF5PQ86XG9 351 aaPredicted RBP10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 CCDC24Q8N4L8 307 aa10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 TAOK3Q9H2K8 898 aa10.43□□□□□ -0.74
AC007879.2-201ENST00000454444 SCN11AQ9UI33 1791 aa10.42□□□□□ -0.74
AC007879.2-201ENST00000454444 TJP1Q07157 1748 aa10.42□□□□□ -0.74
AC007879.2-201ENST00000454444 SNRPA1P09661 255 aaKnown RBP10.42□□□□□ -0.74
AC007879.2-201ENST00000454444 MASTLQ96GX5 879 aa10.42□□□□□ -0.74
AC007879.2-201ENST00000454444 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
AC007879.2-201ENST00000454444 CAMTA2O94983 1202 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 STYK1Q6J9G0 422 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 CLEC4GQ6UXB4 293 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 TPTE2Q6XPS3 522 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 MCM10Q7L590 875 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 USP16Q9Y5T5 823 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
AC007879.2-201ENST00000454444 NFKBIEO00221 500 aa10.4□□□□□ -0.74
AC007879.2-201ENST00000454444 KCNQ3O43525 872 aa10.4□□□□□ -0.74
AC007879.2-201ENST00000454444 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
AC007879.2-201ENST00000454444 CEP350Q5VT06 3117 aa10.4□□□□□ -0.74
AC007879.2-201ENST00000454444 ARFGEF1Q9Y6D6 1849 aa10.4□□□□□ -0.75
AC007879.2-201ENST00000454444 FAM177BA6PVY3 158 aa10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 HTATSF1O43719 755 aaKnown RBP10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 SRGNP10124 158 aa10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 PPP2R1AP30153 589 aa10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 PIP4K2AP48426 406 aaPredicted RBP10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 TAF7Q15545 349 aaPredicted RBP10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
AC007879.2-201ENST00000454444 JMYQ8N9B5 988 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms