RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 COL15A1P39059 1388 aa14.17□□□□□ -0.14
DDX39A-203ENST00000454233 MAPK8IP3Q9UPT6 1336 aa14.16□□□□□ -0.14
DDX39A-203ENST00000454233 FKBP8Q14318 412 aa14.16□□□□□ -0.14
DDX39A-203ENST00000454233 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
DDX39A-203ENST00000454233 A0A087WZG4 1122 aa14.15□□□□□ -0.14
DDX39A-203ENST00000454233 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-203ENST00000454233 TGFB2P61812 414 aa14.15□□□□□ -0.14
DDX39A-203ENST00000454233 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
DDX39A-203ENST00000454233 NPM2Q86SE8 214 aaKnown RBP14.15□□□□□ -0.14
DDX39A-203ENST00000454233 NARFQ9UHQ1 456 aa14.15□□□□□ -0.14
DDX39A-203ENST00000454233 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.15
DDX39A-203ENST00000454233 KCNQ3O43525 872 aa14.14□□□□□ -0.15
DDX39A-203ENST00000454233 PLEKHF1Q96S99 279 aa14.14□□□□□ -0.15
DDX39A-203ENST00000454233 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
DDX39A-203ENST00000454233 C10orf71Q711Q0 1435 aa14.14□□□□□ -0.15
DDX39A-203ENST00000454233 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
DDX39A-203ENST00000454233 TAF7Q15545 349 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-203ENST00000454233 NFE2L2Q16236 605 aa14.13□□□□□ -0.15
DDX39A-203ENST00000454233 ZNF784Q8NCA9 323 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-203ENST00000454233 ZNF330Q9Y3S2 320 aaPredicted RBP14.13□□□□□ -0.15
DDX39A-203ENST00000454233 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
DDX39A-203ENST00000454233 SNRPA1P09661 255 aaKnown RBP14.12□□□□□ -0.15
DDX39A-203ENST00000454233 TM4SF1P30408 202 aa14.12□□□□□ -0.15
DDX39A-203ENST00000454233 DDR1Q08345 913 aa14.12□□□□□ -0.15
DDX39A-203ENST00000454233 KIF13BQ9NQT8 1826 aa14.12□□□□□ -0.15
DDX39A-203ENST00000454233 A0A0G2JLW4 131 aa14.11□□□□□ -0.15
DDX39A-203ENST00000454233 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
DDX39A-203ENST00000454233 A1BGP04217 495 aa14.11□□□□□ -0.15
DDX39A-203ENST00000454233 IL6STP40189 918 aaPredicted RBP14.11□□□□□ -0.15
DDX39A-203ENST00000454233 PNISRQ8TF01 805 aaKnown RBP14.11□□□□□ -0.15
DDX39A-203ENST00000454233 DPEP1P16444 411 aa14.1□□□□□ -0.15
DDX39A-203ENST00000454233 NFIXQ14938 502 aa14.1□□□□□ -0.15
DDX39A-203ENST00000454233 USP16Q9Y5T5 823 aa14.1□□□□□ -0.15
DDX39A-203ENST00000454233 WDR43Q15061 677 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX39A-203ENST00000454233 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
DDX39A-203ENST00000454233 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
DDX39A-203ENST00000454233 DLG5Q8TDM6 1919 aa14.09□□□□□ -0.15
DDX39A-203ENST00000454233 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
DDX39A-203ENST00000454233 MIS18AQ9NYP9 233 aa14.08□□□□□ -0.16
DDX39A-203ENST00000454233 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.16
DDX39A-203ENST00000454233 PRAMEF22A3QJZ6 481 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 SERPINB2P05120 415 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 RIPK4P57078 832 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 BICDL1Q6ZP65 573 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 THUMPD2Q9BTF0 503 aaKnown RBP14.07□□□□□ -0.16
DDX39A-203ENST00000454233 PRKRIP1Q9H875 184 aaPredicted RBP14.07□□□□□ -0.16
DDX39A-203ENST00000454233 PIM2Q9P1W9 311 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
DDX39A-203ENST00000454233 DZIP3Q86Y13 1208 aaKnown RBP14.06□□□□□ -0.16
DDX39A-203ENST00000454233 KCNA3P22001 575 aa14.05□□□□□ -0.16
DDX39A-203ENST00000454233 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
DDX39A-203ENST00000454233 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
DDX39A-203ENST00000454233 TBC1D9BQ66K14 1250 aa14.05□□□□□ -0.16
DDX39A-203ENST00000454233 SCN7AQ01118 1682 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 CAMTA2O94983 1202 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 CHRNA5P30532 468 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 EIF4A1P60842 406 aaKnown RBP14.04□□□□□ -0.16
DDX39A-203ENST00000454233 DALRD3Q5D0E6 543 aaKnown RBP14.04□□□□□ -0.16
DDX39A-203ENST00000454233 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 CCDC146Q8IYE0 955 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 ZNF652Q9Y2D9 606 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
DDX39A-203ENST00000454233 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
DDX39A-203ENST00000454233 NPHP1O15259 732 aa14.03□□□□□ -0.16
DDX39A-203ENST00000454233 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-203ENST00000454233 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
DDX39A-203ENST00000454233 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
DDX39A-203ENST00000454233 KDM3BQ7LBC6 1761 aa14.03□□□□□ -0.16
DDX39A-203ENST00000454233 ATP10DQ9P241 1426 aa14.02□□□□□ -0.16
DDX39A-203ENST00000454233 NBPF26B4DH59 902 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 NBPF10Q6P3W6 841 aaKnown RBP14.02□□□□□ -0.17
DDX39A-203ENST00000454233 CLEC4GQ6UXB4 293 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 NBPF15Q8N660 670 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 RRP7AQ9Y3A4 280 aaKnown RBP14.02□□□□□ -0.17
DDX39A-203ENST00000454233 UTRNP46939 3433 aa14.02□□□□□ -0.17
DDX39A-203ENST00000454233 BRCA1P38398 1863 aaKnown RBP14.01□□□□□ -0.17
DDX39A-203ENST00000454233 H0YIN7 160 aa14.01□□□□□ -0.17
DDX39A-203ENST00000454233 C2CD5Q86YS7 1000 aa14.01□□□□□ -0.17
DDX39A-203ENST00000454233 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
DDX39A-203ENST00000454233 LAMB4A4D0S4 1761 aa14.01□□□□□ -0.17
DDX39A-203ENST00000454233 ADCY9O60503 1353 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 RGL2O15211 777 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 PDE6BP35913 854 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 ST5P78524 1137 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 PRR5LQ6MZQ0 368 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 CNBD1Q8NA66 436 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
DDX39A-203ENST00000454233 BCORQ6W2J9 1755 aa14□□□□□ -0.17
DDX39A-203ENST00000454233 GOLGB1Q14789 3259 aaKnown RBP14□□□□□ -0.17
DDX39A-203ENST00000454233 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
DDX39A-203ENST00000454233 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
DDX39A-203ENST00000454233 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
DDX39A-203ENST00000454233 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms