RNA–Protein interactions for RNA: ENST00000454045.1

HERC2P3-212, Transcript of hect domain and RLD 2 pseudogene 3, humanhuman

TSL 3

Gene HERC2P3, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3-212ENST00000454045 ZNF496Q96IT1 587 aaPredicted RBP16.33■□□□□ 0.2
HERC2P3-212ENST00000454045 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
HERC2P3-212ENST00000454045 TEX13AQ9BXU3 409 aaPredicted RBP16.33■□□□□ 0.2
HERC2P3-212ENST00000454045 COL15A1P39059 1388 aa16.33■□□□□ 0.2
HERC2P3-212ENST00000454045 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
HERC2P3-212ENST00000454045 PXDNLA1KZ92 1463 aa16.32■□□□□ 0.2
HERC2P3-212ENST00000454045 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
HERC2P3-212ENST00000454045 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
HERC2P3-212ENST00000454045 A0A087WZG4 1122 aa16.31■□□□□ 0.2
HERC2P3-212ENST00000454045 DDR1Q08345 913 aa16.31■□□□□ 0.2
HERC2P3-212ENST00000454045 MCM10Q7L590 875 aa16.31■□□□□ 0.2
HERC2P3-212ENST00000454045 ZNF526Q8TF50 670 aaPredicted RBP16.31■□□□□ 0.2
HERC2P3-212ENST00000454045 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
HERC2P3-212ENST00000454045 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 C1QTNF8P60827 252 aa16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 PIM2Q9P1W9 311 aa16.3■□□□□ 0.2
HERC2P3-212ENST00000454045 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 POLRMTO00411 1230 aaKnown RBP16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 TM4SF1P30408 202 aa16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 BICDL1Q6ZP65 573 aa16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
HERC2P3-212ENST00000454045 NFIXQ14938 502 aa16.28■□□□□ 0.2
HERC2P3-212ENST00000454045 UBR2Q8IWV8 1755 aa16.28■□□□□ 0.2
HERC2P3-212ENST00000454045 KCNQ3O43525 872 aa16.27■□□□□ 0.2
HERC2P3-212ENST00000454045 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
HERC2P3-212ENST00000454045 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
HERC2P3-212ENST00000454045 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
HERC2P3-212ENST00000454045 NPHP1O15259 732 aa16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 SERPINB2P05120 415 aa16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 CHRNA5P30532 468 aa16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
HERC2P3-212ENST00000454045 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
HERC2P3-212ENST00000454045 A1BGP04217 495 aa16.25■□□□□ 0.19
HERC2P3-212ENST00000454045 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
HERC2P3-212ENST00000454045 SIPA1L3O60292 1781 aaPredicted RBP16.25■□□□□ 0.19
HERC2P3-212ENST00000454045 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
HERC2P3-212ENST00000454045 KCNA3P22001 575 aa16.24■□□□□ 0.19
HERC2P3-212ENST00000454045 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
HERC2P3-212ENST00000454045 TAF7Q15545 349 aaPredicted RBP16.24■□□□□ 0.19
HERC2P3-212ENST00000454045 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
HERC2P3-212ENST00000454045 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
HERC2P3-212ENST00000454045 RALBP1Q15311 655 aa16.23■□□□□ 0.19
HERC2P3-212ENST00000454045 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
HERC2P3-212ENST00000454045 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
HERC2P3-212ENST00000454045 ADCY9O60503 1353 aa16.22■□□□□ 0.19
HERC2P3-212ENST00000454045 H0YIN7 160 aa16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 PIP4K2AP48426 406 aaPredicted RBP16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 DZIP3Q86Y13 1208 aaKnown RBP16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 C2CD5Q86YS7 1000 aa16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 MIS18AQ9NYP9 233 aa16.21■□□□□ 0.19
HERC2P3-212ENST00000454045 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
HERC2P3-212ENST00000454045 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
HERC2P3-212ENST00000454045 CARMIL3Q8ND23 1372 aa16.19■□□□□ 0.18
HERC2P3-212ENST00000454045 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
HERC2P3-212ENST00000454045 ZNF652Q9Y2D9 606 aa16.19■□□□□ 0.18
HERC2P3-212ENST00000454045 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 CAMTA2O94983 1202 aa16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 PDE6BP35913 854 aa16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 CNBD1Q8NA66 436 aa16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 BRCA1P38398 1863 aaKnown RBP16.18■□□□□ 0.18
HERC2P3-212ENST00000454045 ST5P78524 1137 aa16.17■□□□□ 0.18
HERC2P3-212ENST00000454045 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
HERC2P3-212ENST00000454045 THUMPD2Q9BTF0 503 aaKnown RBP16.17■□□□□ 0.18
HERC2P3-212ENST00000454045 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
HERC2P3-212ENST00000454045 ARFGEF1Q9Y6D6 1849 aa16.17■□□□□ 0.18
HERC2P3-212ENST00000454045 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
HERC2P3-212ENST00000454045 RIPK4P57078 832 aa16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 PRR5LQ6MZQ0 368 aa16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 NBPF5PQ86XG9 351 aaPredicted RBP16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
HERC2P3-212ENST00000454045 SCN7AQ01118 1682 aa16.14■□□□□ 0.18
HERC2P3-212ENST00000454045 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
HERC2P3-212ENST00000454045 WDR43Q15061 677 aaKnown RBP eCLIP16.14■□□□□ 0.17
HERC2P3-212ENST00000454045 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
HERC2P3-212ENST00000454045 C16orf71Q8IYS4 520 aaPredicted RBP16.14■□□□□ 0.17
HERC2P3-212ENST00000454045 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
HERC2P3-212ENST00000454045 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
HERC2P3-212ENST00000454045 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
HERC2P3-212ENST00000454045 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
HERC2P3-212ENST00000454045 RRP7AQ9Y3A4 280 aaKnown RBP16.13■□□□□ 0.17
HERC2P3-212ENST00000454045 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 GTF2E1P29083 439 aaPredicted RBP16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 RASSF7Q02833 373 aa16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
HERC2P3-212ENST00000454045 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms