RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 ABCC6O95255 1503 aa26.59■■□□□ 1.85
SH3D21-201ENST00000453908 STRN4Q9NRL3 753 aa26.59■■□□□ 1.85
SH3D21-201ENST00000453908 WDR17Q8IZU2 1322 aa26.59■■□□□ 1.85
SH3D21-201ENST00000453908 LRRCC1Q9C099 1032 aa26.58■■□□□ 1.85
SH3D21-201ENST00000453908 MYL6BP14649 208 aa26.58■■□□□ 1.85
SH3D21-201ENST00000453908 SDSP20132 328 aa26.58■■□□□ 1.85
SH3D21-201ENST00000453908 PPP1R42Q7Z4L9 355 aa26.58■■□□□ 1.85
SH3D21-201ENST00000453908 SPRYD3Q8NCJ5 442 aa26.57■■□□□ 1.84
SH3D21-201ENST00000453908 CWF19L2Q2TBE0 894 aaKnown RBP26.57■■□□□ 1.84
SH3D21-201ENST00000453908 PIP4K2AP48426 406 aaPredicted RBP26.56■■□□□ 1.84
SH3D21-201ENST00000453908 PDIA6Q15084 440 aa26.56■■□□□ 1.84
SH3D21-201ENST00000453908 RBM25P49756 843 aaKnown RBP26.56■■□□□ 1.84
SH3D21-201ENST00000453908 KSR2Q6VAB6 950 aa26.56■■□□□ 1.84
SH3D21-201ENST00000453908 DDX21Q9NR30 783 aaKnown RBP eCLIP26.56■■□□□ 1.84
SH3D21-201ENST00000453908 HYPKQ9NX55 129 aa26.56■■□□□ 1.84
SH3D21-201ENST00000453908 PDE1AP54750 535 aa26.55■■□□□ 1.84
SH3D21-201ENST00000453908 TTC5Q8N0Z6 440 aa26.55■■□□□ 1.84
SH3D21-201ENST00000453908 IBTKQ9P2D0 1353 aaPredicted RBP26.55■■□□□ 1.84
SH3D21-201ENST00000453908 COL5A2P05997 1499 aaPredicted RBP26.55■■□□□ 1.84
SH3D21-201ENST00000453908 SRGAP3O43295 1099 aa26.55■■□□□ 1.84
SH3D21-201ENST00000453908 CABP4P57796 275 aa26.55■■□□□ 1.84
SH3D21-201ENST00000453908 C5P01031 1676 aa26.54■■□□□ 1.84
SH3D21-201ENST00000453908 SSH3Q8TE77 659 aa26.54■■□□□ 1.84
SH3D21-201ENST00000453908 IL1RAPL2Q9NP60 686 aa26.54■■□□□ 1.84
SH3D21-201ENST00000453908 USP16Q9Y5T5 823 aa26.54■■□□□ 1.84
SH3D21-201ENST00000453908 PKD1L3Q7Z443 1732 aa26.53■■□□□ 1.84
SH3D21-201ENST00000453908 LARP1Q6PKG0 1096 aaKnown RBP26.53■■□□□ 1.84
SH3D21-201ENST00000453908 USP35Q9P2H5 1018 aa26.53■■□□□ 1.84
SH3D21-201ENST00000453908 SURF6O75683 361 aaKnown RBP26.52■■□□□ 1.84
SH3D21-201ENST00000453908 NFKBIBQ15653 356 aa26.52■■□□□ 1.84
SH3D21-201ENST00000453908 C9orf78Q9NZ63 289 aaPredicted RBP26.52■■□□□ 1.84
SH3D21-201ENST00000453908 ZCRB1Q8TBF4 217 aaKnown RBP26.51■■□□□ 1.84
SH3D21-201ENST00000453908 HSP90AB1P08238 724 aaKnown RBP26.51■■□□□ 1.83
SH3D21-201ENST00000453908 EVA1CP58658 441 aa26.5■■□□□ 1.83
SH3D21-201ENST00000453908 DDX54Q8TDD1 881 aaKnown RBP26.5■■□□□ 1.83
SH3D21-201ENST00000453908 POLA2Q14181 598 aa26.49■■□□□ 1.83
SH3D21-201ENST00000453908 XAGE3Q8WTP9 111 aa26.49■■□□□ 1.83
SH3D21-201ENST00000453908 ABCA3Q99758 1704 aa26.49■■□□□ 1.83
SH3D21-201ENST00000453908 DDX58O95786 925 aaKnown RBP26.48■■□□□ 1.83
SH3D21-201ENST00000453908 SNRPA1P09661 255 aaKnown RBP26.48■■□□□ 1.83
SH3D21-201ENST00000453908 MX1P20591 662 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 RIC3Q7Z5B4 369 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 KIF2CQ99661 725 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 OSBPL3Q9H4L5 887 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 MRC1P22897 1456 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 SALL3Q9BXA9 1300 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 FMNL2Q96PY5 1086 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 PCDH11XQ9BZA7 1347 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 PCDH11YQ9BZA8 1340 aa26.48■■□□□ 1.83
SH3D21-201ENST00000453908 COPS6Q7L5N1 327 aa26.47■■□□□ 1.83
SH3D21-201ENST00000453908 IL2RBP14784 551 aa26.47■■□□□ 1.83
SH3D21-201ENST00000453908 ALDH1L1O75891 902 aa26.46■■□□□ 1.83
SH3D21-201ENST00000453908 NUTM1Q86Y26 1132 aa26.46■■□□□ 1.83
SH3D21-201ENST00000453908 CARD10Q9BWT7 1032 aa26.46■■□□□ 1.83
SH3D21-201ENST00000453908 LINS1Q8NG48 757 aa26.45■■□□□ 1.83
SH3D21-201ENST00000453908 RBM42Q9BTD8 480 aaKnown RBP26.45■■□□□ 1.83
SH3D21-201ENST00000453908 HSCBQ8IWL3 235 aa26.45■■□□□ 1.82
SH3D21-201ENST00000453908 NHSL1Q5SYE7 1610 aa26.44■■□□□ 1.82
SH3D21-201ENST00000453908 PLEKHG2Q9H7P9 1386 aa26.44■■□□□ 1.82
SH3D21-201ENST00000453908 PARP4Q9UKK3 1724 aaKnown RBP26.44■■□□□ 1.82
SH3D21-201ENST00000453908 RHPN1Q8TCX5 695 aa26.44■■□□□ 1.82
SH3D21-201ENST00000453908 ANTXR1Q9H6X2 564 aa26.44■■□□□ 1.82
SH3D21-201ENST00000453908 FRAT2O75474 233 aaPredicted RBP26.43■■□□□ 1.82
SH3D21-201ENST00000453908 IGKV5-2P06315 115 aa26.43■■□□□ 1.82
SH3D21-201ENST00000453908 GRM8O00222 908 aa26.43■■□□□ 1.82
SH3D21-201ENST00000453908 CASC1Q6TDU7 716 aa26.43■■□□□ 1.82
SH3D21-201ENST00000453908 TRIM6-TRIM34B2RNG4 842 aa26.41■■□□□ 1.82
SH3D21-201ENST00000453908 MYD88Q99836 296 aa26.41■■□□□ 1.82
SH3D21-201ENST00000453908 RILPL2Q969X0 211 aa26.41■■□□□ 1.82
SH3D21-201ENST00000453908 SUCLG2Q96I99 432 aa26.41■■□□□ 1.82
SH3D21-201ENST00000453908 BTG4Q9NY30 223 aa26.41■■□□□ 1.82
SH3D21-201ENST00000453908 PA2G4Q9UQ80 394 aaKnown RBP26.41■■□□□ 1.82
SH3D21-201ENST00000453908 RAB11FIP3O75154 756 aa26.4■■□□□ 1.82
SH3D21-201ENST00000453908 OS9Q13438 667 aaPredicted RBP26.4■■□□□ 1.82
SH3D21-201ENST00000453908 LRP10Q7Z4F1 713 aa26.4■■□□□ 1.82
SH3D21-201ENST00000453908 CD2BP2O95400 341 aaKnown RBP26.4■■□□□ 1.82
SH3D21-201ENST00000453908 PTCD1O75127 700 aaKnown RBP26.39■■□□□ 1.82
SH3D21-201ENST00000453908 USP26Q9BXU7 913 aa26.39■■□□□ 1.82
SH3D21-201ENST00000453908 KIF1BPQ96EK5 621 aa26.39■■□□□ 1.81
SH3D21-201ENST00000453908 KAZALD1Q96I82 304 aa26.39■■□□□ 1.81
SH3D21-201ENST00000453908 NEXNQ0ZGT2 675 aa26.38■■□□□ 1.81
SH3D21-201ENST00000453908 ANKRD13DQ6ZTN6 518 aa26.38■■□□□ 1.81
SH3D21-201ENST00000453908 UNC5CLQ8IV45 518 aa26.38■■□□□ 1.81
SH3D21-201ENST00000453908 JARID2Q92833 1246 aaPredicted RBP26.38■■□□□ 1.81
SH3D21-201ENST00000453908 BICC1Q9H694 974 aaKnown RBP26.38■■□□□ 1.81
SH3D21-201ENST00000453908 STAP2Q9UGK3 403 aa26.38■■□□□ 1.81
SH3D21-201ENST00000453908 NEURL1BA8MQ27 555 aa26.37■■□□□ 1.81
SH3D21-201ENST00000453908 MAP4K4O95819 1239 aaPredicted RBP26.37■■□□□ 1.81
SH3D21-201ENST00000453908 MTX1Q13505 466 aa26.37■■□□□ 1.81
SH3D21-201ENST00000453908 METTL22Q9BUU2 404 aaPredicted RBP26.36■■□□□ 1.81
SH3D21-201ENST00000453908 ERVV-2B6SEH9 535 aa26.35■■□□□ 1.81
SH3D21-201ENST00000453908 SNX21Q969T3 373 aa26.35■■□□□ 1.81
SH3D21-201ENST00000453908 GLI3P10071 1580 aa26.35■■□□□ 1.81
SH3D21-201ENST00000453908 ATP5J2-PTCD1G3V325 749 aa26.34■■□□□ 1.81
SH3D21-201ENST00000453908 ERC2O15083 957 aa26.34■■□□□ 1.81
SH3D21-201ENST00000453908 GCKRQ14397 625 aa26.34■■□□□ 1.81
SH3D21-201ENST00000453908 NKX1-1Q15270 411 aaPredicted RBP26.34■■□□□ 1.81
SH3D21-201ENST00000453908 UTYO14607 1347 aa26.33■■□□□ 1.81
SH3D21-201ENST00000453908 NBPF26B4DH59 902 aa26.33■■□□□ 1.8
SH3D21-201ENST00000453908 HSP90AB4PQ58FF6 505 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms