RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
HLA-DPA1-244ENST00000453337 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
HLA-DPA1-244ENST00000453337 HYPKQ9NX55 129 aa15.97■□□□□ 0.15
HLA-DPA1-244ENST00000453337 ERBB4Q15303 1308 aa15.96■□□□□ 0.15
HLA-DPA1-244ENST00000453337 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
HLA-DPA1-244ENST00000453337 FTSJ3Q8IY81 847 aaKnown RBP15.96■□□□□ 0.15
HLA-DPA1-244ENST00000453337 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
HLA-DPA1-244ENST00000453337 CHPF2Q9P2E5 772 aa15.96■□□□□ 0.15
HLA-DPA1-244ENST00000453337 C5P01031 1676 aa15.95■□□□□ 0.14
HLA-DPA1-244ENST00000453337 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
HLA-DPA1-244ENST00000453337 TRIM27P14373 513 aa15.95■□□□□ 0.14
HLA-DPA1-244ENST00000453337 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
HLA-DPA1-244ENST00000453337 FLIIQ13045 1269 aa15.94■□□□□ 0.14
HLA-DPA1-244ENST00000453337 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
HLA-DPA1-244ENST00000453337 G2E3Q7L622 706 aa15.94■□□□□ 0.14
HLA-DPA1-244ENST00000453337 BTAF1O14981 1849 aa15.94■□□□□ 0.14
HLA-DPA1-244ENST00000453337 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
HLA-DPA1-244ENST00000453337 SIK1P57059 783 aa15.93■□□□□ 0.14
HLA-DPA1-244ENST00000453337 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
HLA-DPA1-244ENST00000453337 CLUAP1Q96AJ1 413 aa15.93■□□□□ 0.14
HLA-DPA1-244ENST00000453337 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 HMGB2P26583 209 aaKnown RBP15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 PDIA6Q15084 440 aa15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 CRBNQ96SW2 442 aa15.92■□□□□ 0.14
HLA-DPA1-244ENST00000453337 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 AAMPQ13685 434 aa15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 PHAXQ9H814 394 aaKnown RBP15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 ZNF831Q5JPB2 1677 aa15.91■□□□□ 0.14
HLA-DPA1-244ENST00000453337 A1BGP04217 495 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 RLBP1P12271 317 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 MYL6BP14649 208 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 PTF1AQ7RTS3 328 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 EXOC6Q8TAG9 804 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 TNNQ9UQP3 1299 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 COG6Q9Y2V7 657 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 RGS12O14924 1447 aa15.9■□□□□ 0.14
HLA-DPA1-244ENST00000453337 TRIM37O94972 964 aa15.89■□□□□ 0.13
HLA-DPA1-244ENST00000453337 ANXA1P04083 346 aa15.89■□□□□ 0.13
HLA-DPA1-244ENST00000453337 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PROSER3Q2NL68 480 aa15.89■□□□□ 0.13
HLA-DPA1-244ENST00000453337 ABCC4O15439 1325 aa15.89■□□□□ 0.13
HLA-DPA1-244ENST00000453337 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 NBPF10Q6P3W6 841 aaKnown RBP15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 NBPF15Q8N660 670 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
HLA-DPA1-244ENST00000453337 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
HLA-DPA1-244ENST00000453337 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
HLA-DPA1-244ENST00000453337 ITPRIPQ8IWB1 547 aa15.87■□□□□ 0.13
HLA-DPA1-244ENST00000453337 XAGE3Q8WTP9 111 aa15.87■□□□□ 0.13
HLA-DPA1-244ENST00000453337 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 LY75O60449 1722 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 TJP1Q07157 1748 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 ANKRD13DQ6ZTN6 518 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 DNAAF4Q8WXU2 420 aa15.86■□□□□ 0.13
HLA-DPA1-244ENST00000453337 F6X3S4 739 aa15.85■□□□□ 0.13
HLA-DPA1-244ENST00000453337 ITPK1Q13572 414 aa15.85■□□□□ 0.13
HLA-DPA1-244ENST00000453337 RC3H1Q5TC82 1133 aaKnown RBP15.85■□□□□ 0.13
HLA-DPA1-244ENST00000453337 CCDC87Q9NVE4 849 aa15.85■□□□□ 0.13
HLA-DPA1-244ENST00000453337 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PLSCR1O15162 318 aa15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 IL6STP40189 918 aaPredicted RBP15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 CRKLP46109 303 aaKnown RBP15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 PLBD2Q8NHP8 589 aa15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
HLA-DPA1-244ENST00000453337 INTS5Q6P9B9 1019 aaKnown RBP15.83■□□□□ 0.12
HLA-DPA1-244ENST00000453337 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ZBTB7BO15156 539 aaPredicted RBP15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 APBA3O96018 575 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 SRCIN1Q9C0H9 1055 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ZBTB1Q9Y2K1 713 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ADCY9O60503 1353 aa15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
HLA-DPA1-244ENST00000453337 PXDNLA1KZ92 1463 aa15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 ALDH1L1O75891 902 aa15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 EIF5P55010 431 aaKnown RBP15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 KIF6Q6ZMV9 814 aa15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 TAF1LQ8IZX4 1826 aa15.81■□□□□ 0.12
HLA-DPA1-244ENST00000453337 LINC00116Q8NCU8 138 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms