RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF831Q5JPB2 1677 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 NHSQ6T4R5 1651 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 CICQ96RK0 1608 aaPredicted RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 SNRPA1P09661 255 aaKnown RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 FLIIQ13045 1269 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 AAMPQ13685 434 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 INTS3Q68E01 1043 aaKnown RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 LRP10Q7Z4F1 713 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 FTSJ3Q8IY81 847 aaKnown RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 TTC5Q8N0Z6 440 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 CCDC136Q96JN2 1154 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 CHMP4AQ9BY43 222 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 PHAXQ9H814 394 aaKnown RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 TMOD3Q9NYL9 352 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 CHPF2Q9P2E5 772 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 TRPC5Q9UL62 973 aaPredicted RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 ASAP1Q9ULH1 1129 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 DDX19BQ9UMR2 479 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 TAF1LQ8IZX4 1826 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 COL5A3P25940 1745 aaPredicted RBP7.64□□□□□ -1.19
SDC4P-201ENST00000453285 NUP188Q5SRE5 1749 aa7.64□□□□□ -1.19
SDC4P-201ENST00000453285 ANXA1P04083 346 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 PRIM1P49642 420 aaKnown RBP7.63□□□□□ -1.19
SDC4P-201ENST00000453285 PROSER3Q2NL68 480 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 QTRT2Q9H974 415 aaKnown RBP7.63□□□□□ -1.19
SDC4P-201ENST00000453285 DDX21Q9NR30 783 aaKnown RBP eCLIP7.63□□□□□ -1.19
SDC4P-201ENST00000453285 ZBTB40Q9NUA8 1239 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
SDC4P-201ENST00000453285 PCDHB15Q9Y5E8 787 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 NUP98P52948 1817 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 LY75O60449 1722 aa7.63□□□□□ -1.19
SDC4P-201ENST00000453285 KDM2BQ8NHM5 1336 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 F6X3S4 739 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 ITPRIPQ8IWB1 547 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 SLC4A9Q96Q91 983 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 RREB1Q92766 1687 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 PXDNLA1KZ92 1463 aa7.62□□□□□ -1.19
SDC4P-201ENST00000453285 ADCY9O60503 1353 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 NBPF26B4DH59 902 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 PTCD1O75127 700 aaKnown RBP7.61□□□□□ -1.19
SDC4P-201ENST00000453285 IGHDP01880 384 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 FKBP5Q13451 457 aaPredicted RBP7.61□□□□□ -1.19
SDC4P-201ENST00000453285 IFFO2Q5TF58 517 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 NBPF14Q5TI25 921 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
SDC4P-201ENST00000453285 VSIG10Q8N0Z9 540 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 ACSBG1Q96GR2 724 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 HYPKQ9NX55 129 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 ANKRD36CQ5JPF3 1778 aa7.61□□□□□ -1.19
SDC4P-201ENST00000453285 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 PI4KAP2A4QPH2 592 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 KCNQ2O43526 872 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 A1BGP04217 495 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 CCT4P50991 539 aaKnown RBP7.6□□□□□ -1.19
SDC4P-201ENST00000453285 DNAJC10Q8IXB1 793 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 SEPT12Q8IYM1 358 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 PI4KAP1Q8N8J0 262 aa7.6□□□□□ -1.19
SDC4P-201ENST00000453285 SYTL4Q96C24 671 aaPredicted RBP7.6□□□□□ -1.19
SDC4P-201ENST00000453285 MYL6BP14649 208 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 PIP4K2AP48426 406 aaPredicted RBP7.59□□□□□ -1.19
SDC4P-201ENST00000453285 BEND3Q5T5X7 828 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 SLC4A10Q6U841 1118 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 KSR2Q6VAB6 950 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 COPS6Q7L5N1 327 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 PTF1AQ7RTS3 328 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 DNAAF4Q8WXU2 420 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 TEX13AQ9BXU3 409 aaPredicted RBP7.59□□□□□ -1.19
SDC4P-201ENST00000453285 CHMP4BQ9H444 224 aaKnown RBP7.59□□□□□ -1.19
SDC4P-201ENST00000453285 ATP10DQ9P241 1426 aa7.59□□□□□ -1.19
SDC4P-201ENST00000453285 A0A0G2JS52 829 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 CYP19A1P11511 503 aaPredicted RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 MYT1Q01538 1121 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 HDAC1Q13547 482 aaPredicted RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 ZNF772Q68DY9 489 aaPredicted RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 CENPQQ7L2Z9 268 aaPredicted RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 SIRT2Q8IXJ6 389 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 MEIS3Q99687 375 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 RBM42Q9BTD8 480 aaKnown RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 USP44Q9H0E7 712 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 RGS17Q9UGC6 210 aaPredicted RBP7.58□□□□□ -1.2
SDC4P-201ENST00000453285 MAP3K2Q9Y2U5 619 aa7.58□□□□□ -1.2
SDC4P-201ENST00000453285 MYH3P11055 1940 aa7.57□□□□□ -1.2
SDC4P-201ENST00000453285 RBM6P78332 1123 aaKnown RBP7.57□□□□□ -1.2
SDC4P-201ENST00000453285 AIMP1Q12904 312 aaKnown RBP7.57□□□□□ -1.2
SDC4P-201ENST00000453285 TTLL7Q6ZT98 887 aa7.57□□□□□ -1.2
SDC4P-201ENST00000453285 ANKRD13DQ6ZTN6 518 aa7.57□□□□□ -1.2
SDC4P-201ENST00000453285 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
SDC4P-201ENST00000453285 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
SDC4P-201ENST00000453285 PALLDQ8WX93 1383 aa7.57□□□□□ -1.2
SDC4P-201ENST00000453285 IBTKQ9P2D0 1353 aaPredicted RBP7.57□□□□□ -1.2
SDC4P-201ENST00000453285 BCORQ6W2J9 1755 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 ALDH1L1O75891 902 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 STARD3NLO95772 234 aa7.56□□□□□ -1.2
SDC4P-201ENST00000453285 DDX58O95786 925 aaKnown RBP7.56□□□□□ -1.2
SDC4P-201ENST00000453285 IGKV5-2P06315 115 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms