RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
GARNL3-210ENST00000453030 ZPR1O75312 459 aa15.81■□□□□ 0.12
GARNL3-210ENST00000453030 SCN7AQ01118 1682 aa15.81■□□□□ 0.12
GARNL3-210ENST00000453030 ZBTB1Q9Y2K1 713 aa15.81■□□□□ 0.12
GARNL3-210ENST00000453030 CACNA1SQ13698 1873 aa15.8■□□□□ 0.12
GARNL3-210ENST00000453030 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
GARNL3-210ENST00000453030 CYP19A1P11511 503 aaPredicted RBP15.8■□□□□ 0.12
GARNL3-210ENST00000453030 CHRNA5P30532 468 aa15.8■□□□□ 0.12
GARNL3-210ENST00000453030 PIM2Q9P1W9 311 aa15.8■□□□□ 0.12
GARNL3-210ENST00000453030 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
GARNL3-210ENST00000453030 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
GARNL3-210ENST00000453030 DALRD3Q5D0E6 543 aaKnown RBP15.79■□□□□ 0.12
GARNL3-210ENST00000453030 C9orf131Q5VYM1 1079 aa15.79■□□□□ 0.12
GARNL3-210ENST00000453030 NMRK2Q9NPI5 230 aa15.79■□□□□ 0.12
GARNL3-210ENST00000453030 WDR90Q96KV7 1748 aa15.79■□□□□ 0.12
GARNL3-210ENST00000453030 ANKRD31Q8N7Z5 1873 aa15.78■□□□□ 0.12
GARNL3-210ENST00000453030 COL11A2P13942 1736 aaPredicted RBP15.77■□□□□ 0.12
GARNL3-210ENST00000453030 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
GARNL3-210ENST00000453030 TM4SF1P30408 202 aa15.77■□□□□ 0.12
GARNL3-210ENST00000453030 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
GARNL3-210ENST00000453030 NFIXQ14938 502 aa15.76■□□□□ 0.11
GARNL3-210ENST00000453030 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
GARNL3-210ENST00000453030 RNF181Q9P0P0 153 aa15.76■□□□□ 0.11
GARNL3-210ENST00000453030 NARFQ9UHQ1 456 aa15.76■□□□□ 0.11
GARNL3-210ENST00000453030 BCORQ6W2J9 1755 aa15.76■□□□□ 0.11
GARNL3-210ENST00000453030 CARMIL3Q8ND23 1372 aa15.75■□□□□ 0.11
GARNL3-210ENST00000453030 NPC1L1Q9UHC9 1359 aa15.75■□□□□ 0.11
GARNL3-210ENST00000453030 TOMM70O94826 608 aa15.74■□□□□ 0.11
GARNL3-210ENST00000453030 TEFQ10587 303 aa15.74■□□□□ 0.11
GARNL3-210ENST00000453030 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
GARNL3-210ENST00000453030 BCL2L12Q9HB09 334 aa15.74■□□□□ 0.11
GARNL3-210ENST00000453030 RASSF7Q02833 373 aa15.73■□□□□ 0.11
GARNL3-210ENST00000453030 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
GARNL3-210ENST00000453030 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
GARNL3-210ENST00000453030 ZNF330Q9Y3S2 320 aaPredicted RBP15.73■□□□□ 0.11
GARNL3-210ENST00000453030 GNAT3A8MTJ3 354 aa15.72■□□□□ 0.11
GARNL3-210ENST00000453030 STARD3NLO95772 234 aa15.72■□□□□ 0.11
GARNL3-210ENST00000453030 SERPINB2P05120 415 aa15.72■□□□□ 0.11
GARNL3-210ENST00000453030 APLP1P51693 650 aa15.72■□□□□ 0.11
GARNL3-210ENST00000453030 C16orf71Q8IYS4 520 aaPredicted RBP15.72■□□□□ 0.11
GARNL3-210ENST00000453030 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
GARNL3-210ENST00000453030 HEG1Q9ULI3 1381 aa15.72■□□□□ 0.11
GARNL3-210ENST00000453030 KDM2BQ8NHM5 1336 aa15.71■□□□□ 0.11
GARNL3-210ENST00000453030 DICER1Q9UPY3 1922 aaKnown RBP15.71■□□□□ 0.11
GARNL3-210ENST00000453030 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
GARNL3-210ENST00000453030 FER1L6Q2WGJ9 1857 aa15.7■□□□□ 0.1
GARNL3-210ENST00000453030 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
GARNL3-210ENST00000453030 ARFGEF2Q9Y6D5 1785 aa15.7■□□□□ 0.1
GARNL3-210ENST00000453030 PCNTO95613 3336 aa15.7■□□□□ 0.1
GARNL3-210ENST00000453030 EIF5P55010 431 aaKnown RBP15.69■□□□□ 0.1
GARNL3-210ENST00000453030 IFFO2Q5TF58 517 aa15.69■□□□□ 0.1
GARNL3-210ENST00000453030 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
GARNL3-210ENST00000453030 RBM46Q8TBY0 533 aaKnown RBP15.69■□□□□ 0.1
GARNL3-210ENST00000453030 DLG5Q8TDM6 1919 aa15.68■□□□□ 0.1
GARNL3-210ENST00000453030 CEMIPQ8WUJ3 1361 aa15.68■□□□□ 0.1
GARNL3-210ENST00000453030 PRKAR2BP31323 418 aa15.68■□□□□ 0.1
GARNL3-210ENST00000453030 TBC1D9BQ66K14 1250 aa15.68■□□□□ 0.1
GARNL3-210ENST00000453030 TTLL6Q8N841 843 aa15.68■□□□□ 0.1
GARNL3-210ENST00000453030 A0A087WZG4 1122 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 CCDC24Q8N4L8 307 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 FMNL2Q96PY5 1086 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 RRAGCQ9HB90 399 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 TBC1D2BQ9UPU7 963 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 LAMB4A4D0S4 1761 aa15.67■□□□□ 0.1
GARNL3-210ENST00000453030 SLX4Q8IY92 1834 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 H0YIN7 160 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 LMNB1P20700 586 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 PRELPP51888 382 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 HTRA3P83110 453 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 PHACTR3Q96KR7 559 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
GARNL3-210ENST00000453030 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
GARNL3-210ENST00000453030 KCNQ3O43525 872 aa15.65■□□□□ 0.1
GARNL3-210ENST00000453030 A1BGP04217 495 aa15.65■□□□□ 0.1
GARNL3-210ENST00000453030 TEX13AQ9BXU3 409 aaPredicted RBP15.65■□□□□ 0.1
GARNL3-210ENST00000453030 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
GARNL3-210ENST00000453030 NFKBIEO00221 500 aa15.64■□□□□ 0.09
GARNL3-210ENST00000453030 NPHP1O15259 732 aa15.64■□□□□ 0.09
GARNL3-210ENST00000453030 IL6STP40189 918 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-210ENST00000453030 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-210ENST00000453030 PRR5LQ6MZQ0 368 aa15.64■□□□□ 0.09
GARNL3-210ENST00000453030 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
GARNL3-210ENST00000453030 ZNF622Q969S3 477 aaKnown RBP eCLIP15.64■□□□□ 0.09
GARNL3-210ENST00000453030 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
GARNL3-210ENST00000453030 U2AF1L5P0DN76 240 aaPredicted RBP15.63■□□□□ 0.09
GARNL3-210ENST00000453030 U2AF1Q01081 240 aaKnown RBP eCLIP15.63■□□□□ 0.09
GARNL3-210ENST00000453030 FSTL1Q12841 308 aa15.63■□□□□ 0.09
GARNL3-210ENST00000453030 DNAJC5GQ8N7S2 189 aa15.63■□□□□ 0.09
GARNL3-210ENST00000453030 PRAMEF22A3QJZ6 481 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 MCM10Q7L590 875 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 NUDCQ9Y266 331 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
GARNL3-210ENST00000453030 C21orf2O43822 256 aa15.61■□□□□ 0.09
GARNL3-210ENST00000453030 PDE6BP35913 854 aa15.61■□□□□ 0.09
GARNL3-210ENST00000453030 DZIP3Q86Y13 1208 aaKnown RBP15.61■□□□□ 0.09
GARNL3-210ENST00000453030 RTF1Q92541 710 aaKnown RBP15.61■□□□□ 0.09
GARNL3-210ENST00000453030 SETDB2Q96T68 719 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms