RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 UCN2Q96RP3 112 aa10□□□□□ -0.81
SCN3A-205ENST00000453007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.99□□□□□ -0.81
SCN3A-205ENST00000453007 ATP9BO43861 1147 aa9.99□□□□□ -0.81
SCN3A-205ENST00000453007 EFHC2Q5JST6 749 aa9.99□□□□□ -0.81
SCN3A-205ENST00000453007 CFAP70Q5T0N1 1121 aa9.99□□□□□ -0.81
SCN3A-205ENST00000453007 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.99□□□□□ -0.81
SCN3A-205ENST00000453007 PPP1R12CQ9BZL4 782 aa9.99□□□□□ -0.81
SCN3A-205ENST00000453007 MX2P20592 715 aa9.98□□□□□ -0.81
SCN3A-205ENST00000453007 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
SCN3A-205ENST00000453007 CABP1Q9NZU7 370 aa9.98□□□□□ -0.81
SCN3A-205ENST00000453007 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
SCN3A-205ENST00000453007 IGF1RP08069 1367 aa9.98□□□□□ -0.81
SCN3A-205ENST00000453007 PALM3A6NDB9 673 aaPredicted RBP9.97□□□□□ -0.81
SCN3A-205ENST00000453007 ATP1A2P50993 1020 aa9.97□□□□□ -0.81
SCN3A-205ENST00000453007 MAP3K10Q02779 954 aa9.97□□□□□ -0.81
SCN3A-205ENST00000453007 PLEKHM2Q8IWE5 1019 aa9.97□□□□□ -0.81
SCN3A-205ENST00000453007 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
SCN3A-205ENST00000453007 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
SCN3A-205ENST00000453007 NSFL1CQ9UNZ2 370 aaKnown RBP9.97□□□□□ -0.81
SCN3A-205ENST00000453007 PHF24Q9UPV7 400 aa9.97□□□□□ -0.81
SCN3A-205ENST00000453007 CDK2AP1O14519 115 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 PDE4CQ08493 712 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.82
SCN3A-205ENST00000453007 NBPF1Q3BBV0 1214 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 LYPD4Q6UWN0 246 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 ATAD2BQ9ULI0 1458 aa9.96□□□□□ -0.82
SCN3A-205ENST00000453007 THBS1P07996 1170 aa9.95□□□□□ -0.82
SCN3A-205ENST00000453007 SRPK2P78362 688 aaKnown RBP9.95□□□□□ -0.82
SCN3A-205ENST00000453007 MTFR1Q15390 333 aa9.95□□□□□ -0.82
SCN3A-205ENST00000453007 TPCN2Q8NHX9 752 aa9.95□□□□□ -0.82
SCN3A-205ENST00000453007 MKRN1Q9UHC7 482 aaKnown RBP9.95□□□□□ -0.82
SCN3A-205ENST00000453007 MROH2BQ7Z745 1585 aa9.95□□□□□ -0.82
SCN3A-205ENST00000453007 LMOD1P29536 600 aaPredicted RBP9.94□□□□□ -0.82
SCN3A-205ENST00000453007 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
SCN3A-205ENST00000453007 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
SCN3A-205ENST00000453007 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
SCN3A-205ENST00000453007 CFHR5Q9BXR6 569 aa9.94□□□□□ -0.82
SCN3A-205ENST00000453007 DNAAF2Q9NVR5 837 aaKnown RBP9.94□□□□□ -0.82
SCN3A-205ENST00000453007 USP3Q9Y6I4 520 aa9.94□□□□□ -0.82
SCN3A-205ENST00000453007 CELA2BP08218 269 aaPredicted RBP9.93□□□□□ -0.82
SCN3A-205ENST00000453007 TATP17735 454 aaPredicted RBP9.93□□□□□ -0.82
SCN3A-205ENST00000453007 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
SCN3A-205ENST00000453007 OGFOD1Q8N543 542 aa9.93□□□□□ -0.82
SCN3A-205ENST00000453007 CRISPLD1Q9H336 500 aa9.93□□□□□ -0.82
SCN3A-205ENST00000453007 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
SCN3A-205ENST00000453007 KIAA1024Q9UPX6 916 aa9.93□□□□□ -0.82
SCN3A-205ENST00000453007 RBM19Q9Y4C8 960 aaKnown RBP9.93□□□□□ -0.82
SCN3A-205ENST00000453007 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
SCN3A-205ENST00000453007 NCAPD3P42695 1498 aa9.92□□□□□ -0.82
SCN3A-205ENST00000453007 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
SCN3A-205ENST00000453007 CLDN10P78369 228 aa9.92□□□□□ -0.82
SCN3A-205ENST00000453007 ENAMQ9NRM1 1142 aa9.92□□□□□ -0.82
SCN3A-205ENST00000453007 SCHIP1Q9P0W5 487 aaPredicted RBP9.92□□□□□ -0.82
SCN3A-205ENST00000453007 MAFBQ9Y5Q3 323 aaPredicted RBP9.92□□□□□ -0.82
SCN3A-205ENST00000453007 ATP4AP20648 1035 aa9.91□□□□□ -0.82
SCN3A-205ENST00000453007 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
SCN3A-205ENST00000453007 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
SCN3A-205ENST00000453007 ABHD17AQ96GS6 310 aa9.91□□□□□ -0.82
SCN3A-205ENST00000453007 ZNF594Q96JF6 807 aaPredicted RBP9.91□□□□□ -0.82
SCN3A-205ENST00000453007 ATXN7L1Q9ULK2 861 aaPredicted RBP9.91□□□□□ -0.82
SCN3A-205ENST00000453007 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.82
SCN3A-205ENST00000453007 ARHGEF15O94989 841 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 MAP2K3P46734 347 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 TBCELQ5QJ74 424 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 BICDL1Q6ZP65 573 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 LARGE2Q8N3Y3 721 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 USTQ9Y2C2 406 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 GJA3Q9Y6H8 435 aa9.9□□□□□ -0.82
SCN3A-205ENST00000453007 A0A1W2PNR3 127 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 RNF225M0QZC1 329 aaPredicted RBP9.89□□□□□ -0.83
SCN3A-205ENST00000453007 UBAP2LQ14157 1087 aaKnown RBP9.89□□□□□ -0.83
SCN3A-205ENST00000453007 SLC9A9Q8IVB4 645 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 ZDHHC3Q9NYG2 299 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 ZNF232Q9UNY5 417 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 SMARCA4P51532 1647 aa9.89□□□□□ -0.83
SCN3A-205ENST00000453007 BNIP3LO60238 219 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 BCRP11274 1271 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 RASA1P20936 1047 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 MFAP1P55081 439 aaKnown RBP9.88□□□□□ -0.83
SCN3A-205ENST00000453007 NLRP8Q86W28 1048 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 ZNF295-AS1Q8N0V1 137 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 NEDD1Q8NHV4 660 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 ACDQ96AP0 544 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 ZCCHC2Q9C0B9 1178 aaKnown RBP9.88□□□□□ -0.83
SCN3A-205ENST00000453007 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
SCN3A-205ENST00000453007 BRD1O95696 1058 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 BMP4P12644 408 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 FGFR3P22607 806 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 EPHA4P54764 986 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 OXCT2Q9BYC2 517 aaPredicted RBP9.87□□□□□ -0.83
SCN3A-205ENST00000453007 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 CHMP3Q9Y3E7 222 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 PCDHGC4Q9Y5F7 938 aa9.87□□□□□ -0.83
SCN3A-205ENST00000453007 SFI1A8K8P3 1242 aa9.86□□□□□ -0.83
SCN3A-205ENST00000453007 ATXN7O15265 892 aaPredicted RBP9.86□□□□□ -0.83
SCN3A-205ENST00000453007 NOS2P35228 1153 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms