RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 CHMP4AQ9BY43 222 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 SMC4Q9NTJ3 1288 aa25.09■■□□□ 1.61
HIGD1A-204ENST00000452906 BCAR3O75815 825 aa25.08■■□□□ 1.61
HIGD1A-204ENST00000452906 RNMTO43148 476 aaKnown RBP25.07■■□□□ 1.6
HIGD1A-204ENST00000452906 BRPF1P55201 1214 aaPredicted RBP25.07■■□□□ 1.6
HIGD1A-204ENST00000452906 IPO8O15397 1037 aaKnown RBP25.06■■□□□ 1.6
HIGD1A-204ENST00000452906 POLD1P28340 1107 aa25.06■■□□□ 1.6
HIGD1A-204ENST00000452906 CACNA1FO60840 1977 aa25.05■■□□□ 1.6
HIGD1A-204ENST00000452906 VAMP4O75379 141 aa25.05■■□□□ 1.6
HIGD1A-204ENST00000452906 PHKG2P15735 406 aa25.05■■□□□ 1.6
HIGD1A-204ENST00000452906 CHD4Q14839 1912 aa25.05■■□□□ 1.6
HIGD1A-204ENST00000452906 MRC1P22897 1456 aa25.04■■□□□ 1.6
HIGD1A-204ENST00000452906 C4BP0C0L5 1744 aa25.04■■□□□ 1.6
HIGD1A-204ENST00000452906 PLIN1O60240 522 aa25.04■■□□□ 1.6
HIGD1A-204ENST00000452906 YY1P25490 414 aa25.04■■□□□ 1.6
HIGD1A-204ENST00000452906 ZKSCAN2Q63HK3 967 aa25.04■■□□□ 1.6
HIGD1A-204ENST00000452906 SSH1Q8WYL5 1049 aa25.03■■□□□ 1.6
HIGD1A-204ENST00000452906 DCAF5Q96JK2 942 aa25.03■■□□□ 1.6
HIGD1A-204ENST00000452906 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
HIGD1A-204ENST00000452906 PIGBQ92521 554 aa25.02■■□□□ 1.6
HIGD1A-204ENST00000452906 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
HIGD1A-204ENST00000452906 AAMPQ13685 434 aa25.01■■□□□ 1.59
HIGD1A-204ENST00000452906 C8orf58Q8NAV2 365 aa25.01■■□□□ 1.59
HIGD1A-204ENST00000452906 FLAD1Q8NFF5 587 aa25.01■■□□□ 1.59
HIGD1A-204ENST00000452906 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
HIGD1A-204ENST00000452906 LGR6Q9HBX8 967 aa25■■□□□ 1.59
HIGD1A-204ENST00000452906 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
HIGD1A-204ENST00000452906 HOXB7P09629 217 aa24.99■■□□□ 1.59
HIGD1A-204ENST00000452906 KDM6AO15550 1401 aaPredicted RBP24.98■■□□□ 1.59
HIGD1A-204ENST00000452906 COL23A1Q86Y22 540 aaPredicted RBP24.98■■□□□ 1.59
HIGD1A-204ENST00000452906 TSPYL6Q8N831 410 aa24.98■■□□□ 1.59
HIGD1A-204ENST00000452906 ARHGAP45Q92619 1136 aa24.98■■□□□ 1.59
HIGD1A-204ENST00000452906 BCL2L13Q9BXK5 485 aa24.98■■□□□ 1.59
HIGD1A-204ENST00000452906 BTBD11A6QL63 1104 aa24.97■■□□□ 1.59
HIGD1A-204ENST00000452906 ZNF831Q5JPB2 1677 aa24.97■■□□□ 1.59
HIGD1A-204ENST00000452906 MSH5O43196 834 aa24.96■■□□□ 1.59
HIGD1A-204ENST00000452906 FTSJ3Q8IY81 847 aaKnown RBP24.96■■□□□ 1.59
HIGD1A-204ENST00000452906 EXOC6Q8TAG9 804 aa24.96■■□□□ 1.59
HIGD1A-204ENST00000452906 CRBNQ96SW2 442 aa24.96■■□□□ 1.59
HIGD1A-204ENST00000452906 SLC52A2Q9HAB3 445 aa24.96■■□□□ 1.59
HIGD1A-204ENST00000452906 ERVV-2B6SEH9 535 aa24.95■■□□□ 1.58
HIGD1A-204ENST00000452906 ELL2O00472 640 aaPredicted RBP24.95■■□□□ 1.58
HIGD1A-204ENST00000452906 ATF7IPQ6VMQ6 1270 aa24.95■■□□□ 1.58
HIGD1A-204ENST00000452906 AK7Q96M32 723 aa24.95■■□□□ 1.58
HIGD1A-204ENST00000452906 LOC102724428A0A0B4J2F2 783 aa24.94■■□□□ 1.58
HIGD1A-204ENST00000452906 SIK1P57059 783 aa24.94■■□□□ 1.58
HIGD1A-204ENST00000452906 MRPL50Q8N5N7 158 aaKnown RBP24.94■■□□□ 1.58
HIGD1A-204ENST00000452906 MIS18AQ9NYP9 233 aa24.94■■□□□ 1.58
HIGD1A-204ENST00000452906 C20orf194Q5TEA3 1177 aa24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 CCDC30Q5VVM6 783 aa24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 DZIP1LQ8IYY4 767 aaKnown RBP24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 CCDC136Q96JN2 1154 aa24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 STK31Q9BXU1 1019 aa24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 API5Q9BZZ5 524 aaKnown RBP24.93■■□□□ 1.58
HIGD1A-204ENST00000452906 CHMP4BQ9H444 224 aaKnown RBP24.92■■□□□ 1.58
HIGD1A-204ENST00000452906 ASAP1Q9ULH1 1129 aa24.91■■□□□ 1.58
HIGD1A-204ENST00000452906 NOB1Q9ULX3 412 aaKnown RBP24.91■■□□□ 1.58
HIGD1A-204ENST00000452906 PTPRCP08575 1304 aa24.9■■□□□ 1.58
HIGD1A-204ENST00000452906 EIF4A1P60842 406 aaKnown RBP24.9■■□□□ 1.58
HIGD1A-204ENST00000452906 KLHL34Q8N239 644 aa24.9■■□□□ 1.58
HIGD1A-204ENST00000452906 UTRNP46939 3433 aa24.89■■□□□ 1.58
HIGD1A-204ENST00000452906 CABP4P57796 275 aa24.89■■□□□ 1.58
HIGD1A-204ENST00000452906 ATG3Q9NT62 314 aa24.89■■□□□ 1.58
HIGD1A-204ENST00000452906 TRIM27P14373 513 aa24.88■■□□□ 1.57
HIGD1A-204ENST00000452906 SSFA2P28290 1259 aa24.88■■□□□ 1.57
HIGD1A-204ENST00000452906 COL5A3P25940 1745 aaPredicted RBP24.88■■□□□ 1.57
HIGD1A-204ENST00000452906 ATP6V1AP38606 617 aa24.87■■□□□ 1.57
HIGD1A-204ENST00000452906 KRT24Q2M2I5 525 aa24.87■■□□□ 1.57
HIGD1A-204ENST00000452906 LINC00116Q8NCU8 138 aa24.87■■□□□ 1.57
HIGD1A-204ENST00000452906 MVPQ14764 893 aaKnown RBP24.86■■□□□ 1.57
HIGD1A-204ENST00000452906 MSL1Q68DK7 614 aa24.86■■□□□ 1.57
HIGD1A-204ENST00000452906 TTC5Q8N0Z6 440 aa24.86■■□□□ 1.57
HIGD1A-204ENST00000452906 PANK1Q8TE04 598 aa24.86■■□□□ 1.57
HIGD1A-204ENST00000452906 DDX19BQ9UMR2 479 aa24.86■■□□□ 1.57
HIGD1A-204ENST00000452906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.85■■□□□ 1.57
HIGD1A-204ENST00000452906 ITPK1Q13572 414 aa24.85■■□□□ 1.57
HIGD1A-204ENST00000452906 GPR162Q16538 588 aa24.85■■□□□ 1.57
HIGD1A-204ENST00000452906 ZNF790Q6PG37 636 aa24.85■■□□□ 1.57
HIGD1A-204ENST00000452906 HEG1Q9ULI3 1381 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 HDGFL1Q5TGJ6 251 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 NFATC2IPQ8NCF5 419 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 COG6Q9Y2V7 657 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 LAMB4A4D0S4 1761 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 UBR2Q8IWV8 1755 aa24.84■■□□□ 1.57
HIGD1A-204ENST00000452906 AMIGO3Q86WK7 504 aa24.83■■□□□ 1.57
HIGD1A-204ENST00000452906 PHF14O94880 888 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 B4GALNT3Q6L9W6 998 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 NLGN2Q8NFZ4 835 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 CLUAP1Q96AJ1 413 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 CICQ96RK0 1608 aaPredicted RBP24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 ABCC4O15439 1325 aa24.82■■□□□ 1.56
HIGD1A-204ENST00000452906 GNPATO15228 680 aa24.81■■□□□ 1.56
HIGD1A-204ENST00000452906 SLC4A2P04920 1241 aa24.81■■□□□ 1.56
HIGD1A-204ENST00000452906 N4BP2Q86UW6 1770 aaPredicted RBP24.8■■□□□ 1.56
HIGD1A-204ENST00000452906 RLBP1P12271 317 aa24.8■■□□□ 1.56
HIGD1A-204ENST00000452906 FMNL2Q96PY5 1086 aa24.8■■□□□ 1.56
HIGD1A-204ENST00000452906 GIGYF1O75420 1035 aaPredicted RBP24.79■■□□□ 1.56
HIGD1A-204ENST00000452906 ITPRIPQ8IWB1 547 aa24.79■■□□□ 1.56
HIGD1A-204ENST00000452906 MYH14Q7Z406 1995 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms