RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 STK11IPQ8N1F8 1099 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 SMC3Q9UQE7 1217 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 NDUFB9Q9Y6M9 179 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 FLT4P35916 1363 aa13.49□□□□□ -0.25
DDR1-239ENST00000452441 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
DDR1-239ENST00000452441 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 ISY1Q9ULR0 285 aaKnown RBP13.48□□□□□ -0.25
DDR1-239ENST00000452441 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 RIMBP3CA6NJZ7 1639 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 RIMBP3BA6NNM3 1639 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 RIMBP3Q9UFD9 1639 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
DDR1-239ENST00000452441 CLASRPQ8N2M8 674 aaKnown RBP13.48□□□□□ -0.25
DDR1-239ENST00000452441 GPATCH3Q96I76 525 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 CHL1O00533 1208 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 GCP02774 474 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 PTMSP20962 102 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 SPC24Q8NBT2 197 aa13.48□□□□□ -0.25
DDR1-239ENST00000452441 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
DDR1-239ENST00000452441 AACSQ86V21 672 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 CCDC83Q8IWF9 413 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 ABCC4O15439 1325 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 FSD1Q9BTV5 496 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
DDR1-239ENST00000452441 CASTP20810 708 aaKnown RBP13.46□□□□□ -0.25
DDR1-239ENST00000452441 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
DDR1-239ENST00000452441 TMX3Q96JJ7 454 aa13.46□□□□□ -0.25
DDR1-239ENST00000452441 SETD1AO15047 1707 aaKnown RBP13.46□□□□□ -0.25
DDR1-239ENST00000452441 CPSF1Q10570 1443 aaKnown RBP13.46□□□□□ -0.25
DDR1-239ENST00000452441 NECAB1Q8N987 351 aa13.46□□□□□ -0.25
DDR1-239ENST00000452441 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
DDR1-239ENST00000452441 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
DDR1-239ENST00000452441 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
DDR1-239ENST00000452441 CABP4P57796 275 aa13.46□□□□□ -0.26
DDR1-239ENST00000452441 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.26
DDR1-239ENST00000452441 USP26Q9BXU7 913 aa13.46□□□□□ -0.26
DDR1-239ENST00000452441 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
DDR1-239ENST00000452441 BRPF1P55201 1214 aaPredicted RBP13.45□□□□□ -0.26
DDR1-239ENST00000452441 CAMK4Q16566 473 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 PALD1Q9ULE6 856 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
DDR1-239ENST00000452441 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 MAP3K2Q9Y2U5 619 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 ATP7BP35670 1465 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
DDR1-239ENST00000452441 CHMP4AQ9BY43 222 aa13.45□□□□□ -0.26
DDR1-239ENST00000452441 GLIPR1L2Q4G1C9 344 aa13.44□□□□□ -0.26
DDR1-239ENST00000452441 DDX11Q96FC9 970 aa13.44□□□□□ -0.26
DDR1-239ENST00000452441 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
DDR1-239ENST00000452441 LRRC2Q9BYS8 371 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 PTPRCP08575 1304 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 FAM173BQ6P4H8 233 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 MYD88Q99836 296 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 ZBTB3Q9H5J0 574 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
DDR1-239ENST00000452441 TFIP11Q9UBB9 837 aaKnown RBP13.43□□□□□ -0.26
DDR1-239ENST00000452441 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
DDR1-239ENST00000452441 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
DDR1-239ENST00000452441 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
DDR1-239ENST00000452441 DLG5Q8TDM6 1919 aa13.42□□□□□ -0.26
DDR1-239ENST00000452441 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
DDR1-239ENST00000452441 ZSCAN23Q3MJ62 389 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 DLC1Q96QB1 1528 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 H3BQV1 296 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
DDR1-239ENST00000452441 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
DDR1-239ENST00000452441 EDC3Q96F86 508 aaKnown RBP13.4□□□□□ -0.26
DDR1-239ENST00000452441 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
DDR1-239ENST00000452441 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
DDR1-239ENST00000452441 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
DDR1-239ENST00000452441 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 IP6K1Q92551 441 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 ESYT1Q9BSJ8 1104 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
DDR1-239ENST00000452441 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 APPP05067 770 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 GPTP24298 496 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
DDR1-239ENST00000452441 CNPY2Q9Y2B0 182 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms