RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 ZBTB1Q9Y2K1 713 aa24.65■■□□□ 1.54
PDLIM2-214ENST00000452226 SIPA1L3O60292 1781 aaPredicted RBP24.63■■□□□ 1.53
PDLIM2-214ENST00000452226 TM4SF1P30408 202 aa24.63■■□□□ 1.53
PDLIM2-214ENST00000452226 PRKAR2BP31323 418 aa24.63■■□□□ 1.53
PDLIM2-214ENST00000452226 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
PDLIM2-214ENST00000452226 COL15A1P39059 1388 aa24.63■■□□□ 1.53
PDLIM2-214ENST00000452226 FCHSD2O94868 740 aa24.62■■□□□ 1.53
PDLIM2-214ENST00000452226 PPP2R1AP30153 589 aa24.62■■□□□ 1.53
PDLIM2-214ENST00000452226 PHACTR3Q96KR7 559 aa24.62■■□□□ 1.53
PDLIM2-214ENST00000452226 RSPH6AQ9H0K4 717 aa24.62■■□□□ 1.53
PDLIM2-214ENST00000452226 POLRMTO00411 1230 aaKnown RBP24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 STARD3NLO95772 234 aa24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 KCNA3P22001 575 aa24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 ZNF790Q6PG37 636 aa24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 ZNF496Q96IT1 587 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 NARFQ9UHQ1 456 aa24.61■■□□□ 1.53
PDLIM2-214ENST00000452226 CANXP27824 592 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-214ENST00000452226 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-214ENST00000452226 ARFGEF1Q9Y6D6 1849 aa24.59■■□□□ 1.53
PDLIM2-214ENST00000452226 HSPA6P17066 643 aa24.59■■□□□ 1.53
PDLIM2-214ENST00000452226 ARHGAP27Q6ZUM4 889 aa24.59■■□□□ 1.53
PDLIM2-214ENST00000452226 AFDNP55196 1824 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-214ENST00000452226 U2AF1L5P0DN76 240 aaPredicted RBP24.58■■□□□ 1.53
PDLIM2-214ENST00000452226 U2AF1Q01081 240 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDLIM2-214ENST00000452226 PIM2Q9P1W9 311 aa24.58■■□□□ 1.53
PDLIM2-214ENST00000452226 CEMIPQ8WUJ3 1361 aa24.57■■□□□ 1.52
PDLIM2-214ENST00000452226 HEG1Q9ULI3 1381 aa24.57■■□□□ 1.52
PDLIM2-214ENST00000452226 NFIXQ14938 502 aa24.57■■□□□ 1.52
PDLIM2-214ENST00000452226 TEX13AQ9BXU3 409 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-214ENST00000452226 BCL2L12Q9HB09 334 aa24.56■■□□□ 1.52
PDLIM2-214ENST00000452226 CHRNA5P30532 468 aa24.55■■□□□ 1.52
PDLIM2-214ENST00000452226 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
PDLIM2-214ENST00000452226 DALRD3Q5D0E6 543 aaKnown RBP24.55■■□□□ 1.52
PDLIM2-214ENST00000452226 FMNL2Q96PY5 1086 aa24.54■■□□□ 1.52
PDLIM2-214ENST00000452226 A0A087WZG4 1122 aa24.53■■□□□ 1.52
PDLIM2-214ENST00000452226 BTBD11A6QL63 1104 aa24.53■■□□□ 1.52
PDLIM2-214ENST00000452226 NRXN2Q9P2S2 1712 aa24.52■■□□□ 1.52
PDLIM2-214ENST00000452226 KCNQ3O43525 872 aa24.51■■□□□ 1.51
PDLIM2-214ENST00000452226 SERPINB2P05120 415 aa24.51■■□□□ 1.51
PDLIM2-214ENST00000452226 RTF1Q92541 710 aaKnown RBP24.51■■□□□ 1.51
PDLIM2-214ENST00000452226 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
PDLIM2-214ENST00000452226 KIF3CO14782 793 aa24.5■■□□□ 1.51
PDLIM2-214ENST00000452226 BICDL1Q6ZP65 573 aa24.5■■□□□ 1.51
PDLIM2-214ENST00000452226 MCM10Q7L590 875 aa24.5■■□□□ 1.51
PDLIM2-214ENST00000452226 A1BGP04217 495 aa24.48■■□□□ 1.51
PDLIM2-214ENST00000452226 IL6STP40189 918 aaPredicted RBP24.48■■□□□ 1.51
PDLIM2-214ENST00000452226 RALBP1Q15311 655 aa24.48■■□□□ 1.51
PDLIM2-214ENST00000452226 TBC1D2BQ9UPU7 963 aa24.48■■□□□ 1.51
PDLIM2-214ENST00000452226 TOMM70O94826 608 aa24.47■■□□□ 1.51
PDLIM2-214ENST00000452226 C9orf131Q5VYM1 1079 aa24.47■■□□□ 1.51
PDLIM2-214ENST00000452226 SCN7AQ01118 1682 aa24.46■■□□□ 1.51
PDLIM2-214ENST00000452226 IFFO2Q5TF58 517 aa24.46■■□□□ 1.51
PDLIM2-214ENST00000452226 TBC1D9BQ66K14 1250 aa24.46■■□□□ 1.51
PDLIM2-214ENST00000452226 NPM2Q86SE8 214 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-214ENST00000452226 SBF1O95248 1867 aa24.45■■□□□ 1.51
PDLIM2-214ENST00000452226 DLEC1Q9Y238 1755 aa24.45■■□□□ 1.5
PDLIM2-214ENST00000452226 HTATSF1O43719 755 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-214ENST00000452226 DCTN1Q14203 1278 aa24.45■■□□□ 1.5
PDLIM2-214ENST00000452226 APLP1P51693 650 aa24.44■■□□□ 1.5
PDLIM2-214ENST00000452226 USP16Q9Y5T5 823 aa24.44■■□□□ 1.5
PDLIM2-214ENST00000452226 CARMIL3Q8ND23 1372 aa24.43■■□□□ 1.5
PDLIM2-214ENST00000452226 C2CD5Q86YS7 1000 aa24.43■■□□□ 1.5
PDLIM2-214ENST00000452226 C16orf71Q8IYS4 520 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-214ENST00000452226 DLG5Q8TDM6 1919 aa24.42■■□□□ 1.5
PDLIM2-214ENST00000452226 SNRPA1P09661 255 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-214ENST00000452226 ANKRD31Q8N7Z5 1873 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 H0YIN7 160 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 CAMTA2O94983 1202 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 NEFMP07197 916 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 RNF181Q9P0P0 153 aa24.41■■□□□ 1.5
PDLIM2-214ENST00000452226 KDM2BQ8NHM5 1336 aa24.4■■□□□ 1.5
PDLIM2-214ENST00000452226 PIP4K2AP48426 406 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-214ENST00000452226 DZIP3Q86Y13 1208 aaKnown RBP24.4■■□□□ 1.5
PDLIM2-214ENST00000452226 TTLL6Q8N841 843 aa24.4■■□□□ 1.5
PDLIM2-214ENST00000452226 NMRK2Q9NPI5 230 aa24.4■■□□□ 1.5
PDLIM2-214ENST00000452226 BCORQ6W2J9 1755 aa24.39■■□□□ 1.5
PDLIM2-214ENST00000452226 ZNF316A6NFI3 1004 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-214ENST00000452226 TAF7Q15545 349 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-214ENST00000452226 SETDB2Q96T68 719 aa24.39■■□□□ 1.49
PDLIM2-214ENST00000452226 PRR5LQ6MZQ0 368 aa24.38■■□□□ 1.49
PDLIM2-214ENST00000452226 BRIP1Q9BX63 1249 aa24.38■■□□□ 1.49
PDLIM2-214ENST00000452226 RASSF7Q02833 373 aa24.37■■□□□ 1.49
PDLIM2-214ENST00000452226 CCDC24Q8N4L8 307 aa24.37■■□□□ 1.49
PDLIM2-214ENST00000452226 MYBBP1AQ9BQG0 1328 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-214ENST00000452226 PDE6BP35913 854 aa24.36■■□□□ 1.49
PDLIM2-214ENST00000452226 RBM46Q8TBY0 533 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-214ENST00000452226 MIS18AQ9NYP9 233 aa24.36■■□□□ 1.49
PDLIM2-214ENST00000452226 CCDC88AQ3V6T2 1871 aa24.36■■□□□ 1.49
PDLIM2-214ENST00000452226 NPHP1O15259 732 aa24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 CNBD1Q8NA66 436 aa24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 ZNF622Q969S3 477 aaKnown RBP eCLIP24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 PLEKHF1Q96S99 279 aa24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 PRKRIP1Q9H875 184 aaPredicted RBP24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 PDZRN3Q9UPQ7 1066 aa24.35■■□□□ 1.49
PDLIM2-214ENST00000452226 COL11A2P13942 1736 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-214ENST00000452226 NBPF26B4DH59 902 aa24.33■■□□□ 1.49
PDLIM2-214ENST00000452226 NBPF10Q6P3W6 841 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-214ENST00000452226 NBPF15Q8N660 670 aa24.33■■□□□ 1.49
PDLIM2-214ENST00000452226 LMNB1P20700 586 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms