RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
USP1-204ENST00000452143 FCHSD2O94868 740 aa14.75□□□□□ -0.05
USP1-204ENST00000452143 INTS5Q6P9B9 1019 aaKnown RBP14.75□□□□□ -0.05
USP1-204ENST00000452143 SRP68Q9UHB9 627 aaKnown RBP14.75□□□□□ -0.05
USP1-204ENST00000452143 COL15A1P39059 1388 aa14.74□□□□□ -0.05
USP1-204ENST00000452143 KIF3CO14782 793 aa14.74□□□□□ -0.05
USP1-204ENST00000452143 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
USP1-204ENST00000452143 DIAPH1O60610 1272 aaKnown RBP14.74□□□□□ -0.05
USP1-204ENST00000452143 HMOX1P09601 288 aa14.74□□□□□ -0.05
USP1-204ENST00000452143 DDR1Q08345 913 aa14.74□□□□□ -0.05
USP1-204ENST00000452143 FKBP8Q14318 412 aa14.74□□□□□ -0.05
USP1-204ENST00000452143 ZPR1O75312 459 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 KCNA3P22001 575 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 DNAJC10Q8IXB1 793 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 LGR6Q9HBX8 967 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 PIM2Q9P1W9 311 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 SCN7AQ01118 1682 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 TNRC6CQ9HCJ0 1690 aaKnown RBP14.73□□□□□ -0.05
USP1-204ENST00000452143 SBF1O95248 1867 aa14.73□□□□□ -0.05
USP1-204ENST00000452143 POLRMTO00411 1230 aaKnown RBP14.72□□□□□ -0.05
USP1-204ENST00000452143 CYP19A1P11511 503 aaPredicted RBP14.72□□□□□ -0.05
USP1-204ENST00000452143 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
USP1-204ENST00000452143 ARHGAP27Q6ZUM4 889 aa14.72□□□□□ -0.05
USP1-204ENST00000452143 TM4SF1P30408 202 aa14.71□□□□□ -0.05
USP1-204ENST00000452143 DALRD3Q5D0E6 543 aaKnown RBP14.71□□□□□ -0.05
USP1-204ENST00000452143 CC2D1BQ5T0F9 858 aaKnown RBP14.71□□□□□ -0.05
USP1-204ENST00000452143 USPL1Q5W0Q7 1092 aa14.71□□□□□ -0.05
USP1-204ENST00000452143 NARFQ9UHQ1 456 aa14.71□□□□□ -0.05
USP1-204ENST00000452143 TOMM70O94826 608 aa14.7□□□□□ -0.06
USP1-204ENST00000452143 SLC4A2P04920 1241 aa14.7□□□□□ -0.06
USP1-204ENST00000452143 SLC39A6Q13433 755 aa14.7□□□□□ -0.06
USP1-204ENST00000452143 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
USP1-204ENST00000452143 TTC5Q8N0Z6 440 aa14.69□□□□□ -0.06
USP1-204ENST00000452143 C9orf131Q5VYM1 1079 aa14.68□□□□□ -0.06
USP1-204ENST00000452143 GAS2L2Q8NHY3 880 aa14.68□□□□□ -0.06
USP1-204ENST00000452143 WDR90Q96KV7 1748 aa14.68□□□□□ -0.06
USP1-204ENST00000452143 ZC3H4Q9UPT8 1303 aaKnown RBP14.67□□□□□ -0.06
USP1-204ENST00000452143 TIAM2Q8IVF5 1701 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 STARD3NLO95772 234 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 CHRNA5P30532 468 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 APLP1P51693 650 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 NFIXQ14938 502 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 BCORQ6W2J9 1755 aa14.67□□□□□ -0.06
USP1-204ENST00000452143 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
USP1-204ENST00000452143 ANKRD31Q8N7Z5 1873 aa14.66□□□□□ -0.06
USP1-204ENST00000452143 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
USP1-204ENST00000452143 TEFQ10587 303 aa14.66□□□□□ -0.06
USP1-204ENST00000452143 NMRK2Q9NPI5 230 aa14.66□□□□□ -0.06
USP1-204ENST00000452143 CEMIPQ8WUJ3 1361 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 HEG1Q9ULI3 1381 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 A0A087WZG4 1122 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
USP1-204ENST00000452143 ZNF790Q6PG37 636 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 TEX13AQ9BXU3 409 aaPredicted RBP14.65□□□□□ -0.06
USP1-204ENST00000452143 BCL2L12Q9HB09 334 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 RNF181Q9P0P0 153 aa14.65□□□□□ -0.06
USP1-204ENST00000452143 COL11A2P13942 1736 aaPredicted RBP14.64□□□□□ -0.07
USP1-204ENST00000452143 SERPINB2P05120 415 aa14.64□□□□□ -0.07
USP1-204ENST00000452143 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
USP1-204ENST00000452143 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
USP1-204ENST00000452143 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
USP1-204ENST00000452143 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
USP1-204ENST00000452143 IFFO2Q5TF58 517 aa14.63□□□□□ -0.07
USP1-204ENST00000452143 C16orf71Q8IYS4 520 aaPredicted RBP14.63□□□□□ -0.07
USP1-204ENST00000452143 IL17REQ8NFR9 667 aa14.63□□□□□ -0.07
USP1-204ENST00000452143 ZNF496Q96IT1 587 aaPredicted RBP14.63□□□□□ -0.07
USP1-204ENST00000452143 ARFGEF2Q9Y6D5 1785 aa14.62□□□□□ -0.07
USP1-204ENST00000452143 CARMIL3Q8ND23 1372 aa14.62□□□□□ -0.07
USP1-204ENST00000452143 CFAP53Q96M91 514 aa14.62□□□□□ -0.07
USP1-204ENST00000452143 FER1L6Q2WGJ9 1857 aa14.61□□□□□ -0.07
USP1-204ENST00000452143 DICER1Q9UPY3 1922 aaKnown RBP14.61□□□□□ -0.07
USP1-204ENST00000452143 IL6STP40189 918 aaPredicted RBP14.61□□□□□ -0.07
USP1-204ENST00000452143 FSTL1Q12841 308 aa14.61□□□□□ -0.07
USP1-204ENST00000452143 TTLL6Q8N841 843 aa14.61□□□□□ -0.07
USP1-204ENST00000452143 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
USP1-204ENST00000452143 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
USP1-204ENST00000452143 H0YIN7 160 aa14.6□□□□□ -0.07
USP1-204ENST00000452143 LMNB1P20700 586 aa14.6□□□□□ -0.07
USP1-204ENST00000452143 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
USP1-204ENST00000452143 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 PRKAR2BP31323 418 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 RASSF7Q02833 373 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 CHRDL2Q6WN34 429 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 NPM2Q86SE8 214 aaKnown RBP14.59□□□□□ -0.07
USP1-204ENST00000452143 C2CD5Q86YS7 1000 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 LAMB4A4D0S4 1761 aa14.59□□□□□ -0.07
USP1-204ENST00000452143 PDE6BP35913 854 aa14.58□□□□□ -0.08
USP1-204ENST00000452143 TBC1D9BQ66K14 1250 aa14.58□□□□□ -0.08
USP1-204ENST00000452143 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
USP1-204ENST00000452143 BRIP1Q9BX63 1249 aa14.58□□□□□ -0.08
USP1-204ENST00000452143 NUDCQ9Y266 331 aa14.58□□□□□ -0.08
USP1-204ENST00000452143 BTBD11A6QL63 1104 aa14.57□□□□□ -0.08
USP1-204ENST00000452143 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
USP1-204ENST00000452143 DNAJC5GQ8N7S2 189 aa14.57□□□□□ -0.08
USP1-204ENST00000452143 PHACTR3Q96KR7 559 aa14.57□□□□□ -0.08
USP1-204ENST00000452143 ZNF330Q9Y3S2 320 aaPredicted RBP14.57□□□□□ -0.08
USP1-204ENST00000452143 PCNTO95613 3336 aa14.56□□□□□ -0.08
USP1-204ENST00000452143 PRR5LQ6MZQ0 368 aa14.56□□□□□ -0.08
USP1-204ENST00000452143 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms