RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TTC5Q8N0Z6 440 aa36.42■■■■□ 3.42
USP42-204ENST00000451154 PHACTR3Q96KR7 559 aa36.42■■■■□ 3.42
USP42-204ENST00000451154 POLRMTO00411 1230 aaKnown RBP36.41■■■■□ 3.42
USP42-204ENST00000451154 NARFQ9UHQ1 456 aa36.4■■■■□ 3.42
USP42-204ENST00000451154 CANXP27824 592 aaKnown RBP36.39■■■■□ 3.42
USP42-204ENST00000451154 PRKAR2BP31323 418 aa36.39■■■■□ 3.42
USP42-204ENST00000451154 COL15A1P39059 1388 aa36.38■■■■□ 3.41
USP42-204ENST00000451154 PPP2R1AP30153 589 aa36.37■■■■□ 3.41
USP42-204ENST00000451154 ZNF790Q6PG37 636 aa36.37■■■■□ 3.41
USP42-204ENST00000451154 ZNF496Q96IT1 587 aaPredicted RBP36.37■■■■□ 3.41
USP42-204ENST00000451154 RSPH6AQ9H0K4 717 aa36.37■■■■□ 3.41
USP42-204ENST00000451154 PIM2Q9P1W9 311 aa36.37■■■■□ 3.41
USP42-204ENST00000451154 UBR2Q8IWV8 1755 aa36.36■■■■□ 3.41
USP42-204ENST00000451154 STARD3NLO95772 234 aa36.36■■■■□ 3.41
USP42-204ENST00000451154 NUDCQ9Y266 331 aa36.36■■■■□ 3.41
USP42-204ENST00000451154 BRCA1P38398 1863 aaKnown RBP36.35■■■■□ 3.41
USP42-204ENST00000451154 NFIXQ14938 502 aa36.35■■■■□ 3.41
USP42-204ENST00000451154 CHRNA5P30532 468 aa36.34■■■■□ 3.41
USP42-204ENST00000451154 BCL2L12Q9HB09 334 aa36.34■■■■□ 3.41
USP42-204ENST00000451154 CEP350Q5VT06 3117 aa36.32■■■■□ 3.4
USP42-204ENST00000451154 U2AF1L5P0DN76 240 aaPredicted RBP36.32■■■■□ 3.4
USP42-204ENST00000451154 U2AF1Q01081 240 aaKnown RBP eCLIP36.32■■■■□ 3.4
USP42-204ENST00000451154 DALRD3Q5D0E6 543 aaKnown RBP36.31■■■■□ 3.4
USP42-204ENST00000451154 HEG1Q9ULI3 1381 aa36.3■■■■□ 3.4
USP42-204ENST00000451154 EIF5P55010 431 aaKnown RBP36.3■■■■□ 3.4
USP42-204ENST00000451154 KCNQ3O43525 872 aa36.29■■■■□ 3.4
USP42-204ENST00000451154 TEX13AQ9BXU3 409 aaPredicted RBP36.29■■■■□ 3.4
USP42-204ENST00000451154 SIPA1L3O60292 1781 aaPredicted RBP36.29■■■■□ 3.4
USP42-204ENST00000451154 CEMIPQ8WUJ3 1361 aa36.28■■■■□ 3.4
USP42-204ENST00000451154 FMNL2Q96PY5 1086 aa36.27■■■■□ 3.4
USP42-204ENST00000451154 AFDNP55196 1824 aaKnown RBP36.27■■■■□ 3.4
USP42-204ENST00000451154 BTBD11A6QL63 1104 aa36.26■■■■□ 3.4
USP42-204ENST00000451154 SERPINB2P05120 415 aa36.26■■■■□ 3.4
USP42-204ENST00000451154 ARFGEF1Q9Y6D6 1849 aa36.26■■■■□ 3.39
USP42-204ENST00000451154 A0A087WZG4 1122 aa36.25■■■■□ 3.39
USP42-204ENST00000451154 BICDL1Q6ZP65 573 aa36.25■■■■□ 3.39
USP42-204ENST00000451154 ZNF330Q9Y3S2 320 aaPredicted RBP36.25■■■■□ 3.39
USP42-204ENST00000451154 KIF3CO14782 793 aa36.23■■■■□ 3.39
USP42-204ENST00000451154 A1BGP04217 495 aa36.23■■■■□ 3.39
USP42-204ENST00000451154 C9orf131Q5VYM1 1079 aa36.22■■■■□ 3.39
USP42-204ENST00000451154 MCM10Q7L590 875 aa36.22■■■■□ 3.39
USP42-204ENST00000451154 TBC1D2BQ9UPU7 963 aa36.22■■■■□ 3.39
USP42-204ENST00000451154 RTF1Q92541 710 aaKnown RBP36.21■■■■□ 3.39
USP42-204ENST00000451154 IL6STP40189 918 aaPredicted RBP36.18■■■■□ 3.38
USP42-204ENST00000451154 DCTN1Q14203 1278 aa36.18■■■■□ 3.38
USP42-204ENST00000451154 TBC1D9BQ66K14 1250 aa36.18■■■■□ 3.38
USP42-204ENST00000451154 NRXN2Q9P2S2 1712 aa36.17■■■■□ 3.38
USP42-204ENST00000451154 USP16Q9Y5T5 823 aa36.17■■■■□ 3.38
USP42-204ENST00000451154 PRAMEF22A3QJZ6 481 aa36.14■■■■□ 3.38
USP42-204ENST00000451154 NPM2Q86SE8 214 aaKnown RBP36.14■■■■□ 3.38
USP42-204ENST00000451154 C2CD5Q86YS7 1000 aa36.14■■■■□ 3.38
USP42-204ENST00000451154 HSPA6P17066 643 aa36.12■■■■□ 3.37
USP42-204ENST00000451154 PIP4K2AP48426 406 aaPredicted RBP36.12■■■■□ 3.37
USP42-204ENST00000451154 NMRK2Q9NPI5 230 aa36.12■■■■□ 3.37
USP42-204ENST00000451154 RNF181Q9P0P0 153 aa36.12■■■■□ 3.37
USP42-204ENST00000451154 CARMIL3Q8ND23 1372 aa36.12■■■■□ 3.37
USP42-204ENST00000451154 H0YIN7 160 aa36.1■■■■□ 3.37
USP42-204ENST00000451154 HTATSF1O43719 755 aaKnown RBP36.1■■■■□ 3.37
USP42-204ENST00000451154 CCDC24Q8N4L8 307 aa36.1■■■■□ 3.37
USP42-204ENST00000451154 TTLL6Q8N841 843 aa36.1■■■■□ 3.37
USP42-204ENST00000451154 CAMTA2O94983 1202 aa36.09■■■■□ 3.37
USP42-204ENST00000451154 SBF1O95248 1867 aa36.09■■■■□ 3.37
USP42-204ENST00000451154 SNRPA1P09661 255 aaKnown RBP36.08■■■■□ 3.37
USP42-204ENST00000451154 DZIP3Q86Y13 1208 aaKnown RBP36.07■■■■□ 3.36
USP42-204ENST00000451154 RASSF7Q02833 373 aa36.06■■■■□ 3.36
USP42-204ENST00000451154 SETDB2Q96T68 719 aa36.06■■■■□ 3.36
USP42-204ENST00000451154 MIS18AQ9NYP9 233 aa36.06■■■■□ 3.36
USP42-204ENST00000451154 TAF7Q15545 349 aaPredicted RBP36.05■■■■□ 3.36
USP42-204ENST00000451154 PRR5LQ6MZQ0 368 aa36.05■■■■□ 3.36
USP42-204ENST00000451154 SCN7AQ01118 1682 aa36.04■■■■□ 3.36
USP42-204ENST00000451154 TOMM70O94826 608 aa36.04■■■■□ 3.36
USP42-204ENST00000451154 BRIP1Q9BX63 1249 aa36.04■■■■□ 3.36
USP42-204ENST00000451154 DLEC1Q9Y238 1755 aa36.03■■■■□ 3.36
USP42-204ENST00000451154 ZNF622Q969S3 477 aaKnown RBP eCLIP36.03■■■■□ 3.36
USP42-204ENST00000451154 NEFMP07197 916 aa36.01■■■■□ 3.36
USP42-204ENST00000451154 PDE6BP35913 854 aa36.01■■■■□ 3.36
USP42-204ENST00000451154 ANKRD31Q8N7Z5 1873 aa36.01■■■■□ 3.35
USP42-204ENST00000451154 PRELPP51888 382 aa35.99■■■■□ 3.35
USP42-204ENST00000451154 PLEKHF1Q96S99 279 aa35.99■■■■□ 3.35
USP42-204ENST00000451154 NBPF26B4DH59 902 aa35.98■■■■□ 3.35
USP42-204ENST00000451154 NPHP1O15259 732 aa35.98■■■■□ 3.35
USP42-204ENST00000451154 NBPF10Q6P3W6 841 aaKnown RBP35.98■■■■□ 3.35
USP42-204ENST00000451154 NBPF15Q8N660 670 aa35.98■■■■□ 3.35
USP42-204ENST00000451154 CNBD1Q8NA66 436 aa35.98■■■■□ 3.35
USP42-204ENST00000451154 KDM2BQ8NHM5 1336 aa35.98■■■■□ 3.35
USP42-204ENST00000451154 RRAGCQ9HB90 399 aa35.97■■■■□ 3.35
USP42-204ENST00000451154 PDZRN3Q9UPQ7 1066 aa35.97■■■■□ 3.35
USP42-204ENST00000451154 DLG5Q8TDM6 1919 aa35.96■■■■□ 3.35
USP42-204ENST00000451154 LMNB1P20700 586 aa35.96■■■■□ 3.35
USP42-204ENST00000451154 ZNF219Q9P2Y4 722 aaPredicted RBP35.96■■■■□ 3.35
USP42-204ENST00000451154 CLEC4GQ6UXB4 293 aa35.95■■■■□ 3.35
USP42-204ENST00000451154 C16orf71Q8IYS4 520 aaPredicted RBP35.94■■■■□ 3.34
USP42-204ENST00000451154 CCDC88AQ3V6T2 1871 aa35.93■■■■□ 3.34
USP42-204ENST00000451154 C21orf2O43822 256 aa35.93■■■■□ 3.34
USP42-204ENST00000451154 ST5P78524 1137 aa35.93■■■■□ 3.34
USP42-204ENST00000451154 NFE2L2Q16236 605 aa35.93■■■■□ 3.34
USP42-204ENST00000451154 THUMPD2Q9BTF0 503 aaKnown RBP35.93■■■■□ 3.34
USP42-204ENST00000451154 BCORQ6W2J9 1755 aa35.93■■■■□ 3.34
USP42-204ENST00000451154 NFKBIEO00221 500 aa35.92■■■■□ 3.34
USP42-204ENST00000451154 RBM46Q8TBY0 533 aaKnown RBP35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms