RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TM4SF1P30408 202 aa21.28■■□□□ 1
SGCE-208ENST00000450385 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
SGCE-208ENST00000450385 ZNF784Q8NCA9 323 aaPredicted RBP21.27■■□□□ 1
SGCE-208ENST00000450385 COL15A1P39059 1388 aa21.26■□□□□ 0.99
SGCE-208ENST00000450385 EIF5P55010 431 aaKnown RBP21.26■□□□□ 0.99
SGCE-208ENST00000450385 FKBP8Q14318 412 aa21.26■□□□□ 0.99
SGCE-208ENST00000450385 C10orf71Q711Q0 1435 aa21.26■□□□□ 0.99
SGCE-208ENST00000450385 IL6STP40189 918 aaPredicted RBP21.25■□□□□ 0.99
SGCE-208ENST00000450385 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
SGCE-208ENST00000450385 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
SGCE-208ENST00000450385 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
SGCE-208ENST00000450385 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
SGCE-208ENST00000450385 ZBTB1Q9Y2K1 713 aa21.25■□□□□ 0.99
SGCE-208ENST00000450385 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
SGCE-208ENST00000450385 SRP68Q9UHB9 627 aaKnown RBP21.24■□□□□ 0.99
SGCE-208ENST00000450385 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
SGCE-208ENST00000450385 USPL1Q5W0Q7 1092 aa21.23■□□□□ 0.99
SGCE-208ENST00000450385 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
SGCE-208ENST00000450385 SNRPA1P09661 255 aaKnown RBP21.22■□□□□ 0.99
SGCE-208ENST00000450385 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
SGCE-208ENST00000450385 POLRMTO00411 1230 aaKnown RBP21.21■□□□□ 0.99
SGCE-208ENST00000450385 RGL2O15211 777 aa21.21■□□□□ 0.99
SGCE-208ENST00000450385 CANXP27824 592 aaKnown RBP21.21■□□□□ 0.99
SGCE-208ENST00000450385 NFE2L2Q16236 605 aa21.21■□□□□ 0.99
SGCE-208ENST00000450385 MCM10Q7L590 875 aa21.21■□□□□ 0.99
SGCE-208ENST00000450385 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
SGCE-208ENST00000450385 PXDNLA1KZ92 1463 aa21.2■□□□□ 0.98
SGCE-208ENST00000450385 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
SGCE-208ENST00000450385 N4BP2Q86UW6 1770 aaPredicted RBP21.19■□□□□ 0.98
SGCE-208ENST00000450385 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
SGCE-208ENST00000450385 BRCA1P38398 1863 aaKnown RBP21.19■□□□□ 0.98
SGCE-208ENST00000450385 DDR1Q08345 913 aa21.18■□□□□ 0.98
SGCE-208ENST00000450385 PIM2Q9P1W9 311 aa21.18■□□□□ 0.98
SGCE-208ENST00000450385 A0A0G2JLW4 131 aa21.17■□□□□ 0.98
SGCE-208ENST00000450385 NFIXQ14938 502 aa21.17■□□□□ 0.98
SGCE-208ENST00000450385 BABAM1Q9NWV8 329 aa21.17■□□□□ 0.98
SGCE-208ENST00000450385 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
SGCE-208ENST00000450385 ARFGEF1Q9Y6D6 1849 aa21.16■□□□□ 0.98
SGCE-208ENST00000450385 DPEP1P16444 411 aa21.16■□□□□ 0.98
SGCE-208ENST00000450385 CLEC4GQ6UXB4 293 aa21.16■□□□□ 0.98
SGCE-208ENST00000450385 BCL2L12Q9HB09 334 aa21.16■□□□□ 0.98
SGCE-208ENST00000450385 AFDNP55196 1824 aaKnown RBP21.15■□□□□ 0.98
SGCE-208ENST00000450385 KCNQ3O43525 872 aa21.15■□□□□ 0.98
SGCE-208ENST00000450385 A1BGP04217 495 aa21.15■□□□□ 0.98
SGCE-208ENST00000450385 KCNA3P22001 575 aa21.15■□□□□ 0.98
SGCE-208ENST00000450385 LMOD3Q0VAK6 560 aa21.15■□□□□ 0.98
SGCE-208ENST00000450385 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
SGCE-208ENST00000450385 SERPINB2P05120 415 aa21.14■□□□□ 0.97
SGCE-208ENST00000450385 DCTN1Q14203 1278 aa21.14■□□□□ 0.97
SGCE-208ENST00000450385 DALRD3Q5D0E6 543 aaKnown RBP21.13■□□□□ 0.97
SGCE-208ENST00000450385 BCS1LQ9Y276 419 aa21.13■□□□□ 0.97
SGCE-208ENST00000450385 ZNF652Q9Y2D9 606 aa21.12■□□□□ 0.97
SGCE-208ENST00000450385 SETDB2Q96T68 719 aa21.11■□□□□ 0.97
SGCE-208ENST00000450385 SCN7AQ01118 1682 aa21.11■□□□□ 0.97
SGCE-208ENST00000450385 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
SGCE-208ENST00000450385 DZIP3Q86Y13 1208 aaKnown RBP21.1■□□□□ 0.97
SGCE-208ENST00000450385 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
SGCE-208ENST00000450385 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
SGCE-208ENST00000450385 ADCY9O60503 1353 aa21.1■□□□□ 0.97
SGCE-208ENST00000450385 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
SGCE-208ENST00000450385 CAMTA2O94983 1202 aa21.09■□□□□ 0.97
SGCE-208ENST00000450385 RIPK4P57078 832 aa21.09■□□□□ 0.97
SGCE-208ENST00000450385 WDR43Q15061 677 aaKnown RBP eCLIP21.09■□□□□ 0.97
SGCE-208ENST00000450385 GIGYF1O75420 1035 aaPredicted RBP21.08■□□□□ 0.97
SGCE-208ENST00000450385 PDE6BP35913 854 aa21.08■□□□□ 0.97
SGCE-208ENST00000450385 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
SGCE-208ENST00000450385 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
SGCE-208ENST00000450385 TBC1D9BQ66K14 1250 aa21.08■□□□□ 0.97
SGCE-208ENST00000450385 BRIP1Q9BX63 1249 aa21.08■□□□□ 0.97
SGCE-208ENST00000450385 ZNF330Q9Y3S2 320 aaPredicted RBP21.08■□□□□ 0.97
SGCE-208ENST00000450385 H0YIN7 160 aa21.07■□□□□ 0.96
SGCE-208ENST00000450385 ARHGAP27Q6ZUM4 889 aa21.07■□□□□ 0.96
SGCE-208ENST00000450385 RUNDC1Q96C34 613 aa21.07■□□□□ 0.96
SGCE-208ENST00000450385 LAMB4A4D0S4 1761 aa21.07■□□□□ 0.96
SGCE-208ENST00000450385 BCORQ6W2J9 1755 aa21.07■□□□□ 0.96
SGCE-208ENST00000450385 ERBB4Q15303 1308 aa21.06■□□□□ 0.96
SGCE-208ENST00000450385 DLEC1Q9Y238 1755 aa21.06■□□□□ 0.96
SGCE-208ENST00000450385 C1QTNF8P60827 252 aa21.05■□□□□ 0.96
SGCE-208ENST00000450385 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
SGCE-208ENST00000450385 GPBP1L1Q9HC44 474 aaPredicted RBP21.05■□□□□ 0.96
SGCE-208ENST00000450385 MIS18AQ9NYP9 233 aa21.05■□□□□ 0.96
SGCE-208ENST00000450385 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
SGCE-208ENST00000450385 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
SGCE-208ENST00000450385 ERVV-1B6SEH8 477 aa21.04■□□□□ 0.96
SGCE-208ENST00000450385 NBPF26B4DH59 902 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 CHRNA5P30532 468 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 ST5P78524 1137 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 NBPF10Q6P3W6 841 aaKnown RBP21.03■□□□□ 0.96
SGCE-208ENST00000450385 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 NBPF15Q8N660 670 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 WWC3Q9ULE0 1092 aa21.03■□□□□ 0.96
SGCE-208ENST00000450385 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.96
SGCE-208ENST00000450385 TPTE2Q6XPS3 522 aa21.02■□□□□ 0.96
SGCE-208ENST00000450385 C2CD5Q86YS7 1000 aa21.02■□□□□ 0.96
SGCE-208ENST00000450385 CNBD1Q8NA66 436 aa21.02■□□□□ 0.96
SGCE-208ENST00000450385 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
SGCE-208ENST00000450385 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
SGCE-208ENST00000450385 NPHP1O15259 732 aa21■□□□□ 0.95
SGCE-208ENST00000450385 SBF1O95248 1867 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 310.2 ms