RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MEIS3Q99687 375 aa17.93■□□□□ 0.46
USP39-207ENST00000450066 LRP6O75581 1613 aa17.93■□□□□ 0.46
USP39-207ENST00000450066 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
USP39-207ENST00000450066 SIRT2Q8IXJ6 389 aa17.92■□□□□ 0.46
USP39-207ENST00000450066 FNBP4Q8N3X1 1017 aaPredicted RBP17.92■□□□□ 0.46
USP39-207ENST00000450066 USP16Q9Y5T5 823 aa17.92■□□□□ 0.46
USP39-207ENST00000450066 BCL9LQ86UU0 1499 aa17.92■□□□□ 0.46
USP39-207ENST00000450066 PI4KAP2A4QPH2 592 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 DDB1Q16531 1140 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 RPAP2Q8IXW5 612 aaPredicted RBP17.91■□□□□ 0.46
USP39-207ENST00000450066 PI4KAP1Q8N8J0 262 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 DNAAF4Q8WXU2 420 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
USP39-207ENST00000450066 ADCY9O60503 1353 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 PDZRN3Q9UPQ7 1066 aa17.91■□□□□ 0.46
USP39-207ENST00000450066 ATP10DQ9P241 1426 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 GNAI3P08754 354 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 HSPA1LP34931 641 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 VPS72Q15906 364 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 KSR2Q6VAB6 950 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 PIGBQ92521 554 aa17.9■□□□□ 0.46
USP39-207ENST00000450066 LAMB4A4D0S4 1761 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 DDX58O95786 925 aaKnown RBP17.89■□□□□ 0.45
USP39-207ENST00000450066 RGS3P49796 1198 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 ANKRD44Q8N8A2 993 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 GCC1Q96CN9 775 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 SRCIN1Q9C0H9 1055 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 BEND3Q5T5X7 828 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
USP39-207ENST00000450066 CEP85Q6P2H3 762 aa17.88■□□□□ 0.45
USP39-207ENST00000450066 BCL9O00512 1426 aa17.88■□□□□ 0.45
USP39-207ENST00000450066 GNAI2P04899 355 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
USP39-207ENST00000450066 ITGB4P16144 1822 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
USP39-207ENST00000450066 MYL6BP14649 208 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 LRP10Q7Z4F1 713 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 USP44Q9H0E7 712 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
USP39-207ENST00000450066 NUCB1Q02818 461 aa17.86■□□□□ 0.45
USP39-207ENST00000450066 VSIG10Q8N0Z9 540 aa17.86■□□□□ 0.45
USP39-207ENST00000450066 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
USP39-207ENST00000450066 ASAP1Q9ULH1 1129 aa17.86■□□□□ 0.45
USP39-207ENST00000450066 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
USP39-207ENST00000450066 ALDH1L1O75891 902 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 AIMP1Q12904 312 aaKnown RBP17.84■□□□□ 0.45
USP39-207ENST00000450066 COPS6Q7L5N1 327 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 MARCH10Q8NA82 808 aaPredicted RBP17.84■□□□□ 0.45
USP39-207ENST00000450066 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 DCTPP1Q9H773 170 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 USP21Q9UK80 565 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
USP39-207ENST00000450066 PDE4AP27815 886 aa17.84■□□□□ 0.45
USP39-207ENST00000450066 TEX13AQ9BXU3 409 aaPredicted RBP17.84■□□□□ 0.45
USP39-207ENST00000450066 HMMRO75330 724 aa17.83■□□□□ 0.45
USP39-207ENST00000450066 FAM98CQ17RN3 349 aaKnown RBP17.83■□□□□ 0.45
USP39-207ENST00000450066 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.44
USP39-207ENST00000450066 LINS1Q8NG48 757 aa17.83■□□□□ 0.44
USP39-207ENST00000450066 BACH2Q9BYV9 841 aa17.83■□□□□ 0.44
USP39-207ENST00000450066 IBTKQ9P2D0 1353 aaPredicted RBP17.82■□□□□ 0.44
USP39-207ENST00000450066 DOT1LQ8TEK3 1739 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 NBPF14Q5TI25 921 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
USP39-207ENST00000450066 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
USP39-207ENST00000450066 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 RIC3Q7Z5B4 369 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 CHD1LQ86WJ1 897 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
USP39-207ENST00000450066 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
USP39-207ENST00000450066 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
USP39-207ENST00000450066 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
USP39-207ENST00000450066 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
USP39-207ENST00000450066 A1BGP04217 495 aa17.79■□□□□ 0.44
USP39-207ENST00000450066 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
USP39-207ENST00000450066 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
USP39-207ENST00000450066 NEXNQ0ZGT2 675 aa17.79■□□□□ 0.44
USP39-207ENST00000450066 FAM161AQ3B820 660 aa17.79■□□□□ 0.44
USP39-207ENST00000450066 METTL22Q9BUU2 404 aaPredicted RBP17.79■□□□□ 0.44
USP39-207ENST00000450066 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
USP39-207ENST00000450066 STARD3NLO95772 234 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 LNPKQ9C0E8 428 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 HDAC5Q9UQL6 1122 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 IGKV5-2P06315 115 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 CWF19L2Q2TBE0 894 aaKnown RBP17.78■□□□□ 0.44
USP39-207ENST00000450066 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
USP39-207ENST00000450066 C9orf78Q9NZ63 289 aaPredicted RBP17.78■□□□□ 0.44
USP39-207ENST00000450066 UTYO14607 1347 aa17.77■□□□□ 0.44
USP39-207ENST00000450066 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.43
USP39-207ENST00000450066 AFF2P51816 1311 aa17.77■□□□□ 0.43
USP39-207ENST00000450066 C8orf34Q49A92 452 aa17.76■□□□□ 0.43
USP39-207ENST00000450066 GRM8O00222 908 aa17.76■□□□□ 0.43
USP39-207ENST00000450066 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
USP39-207ENST00000450066 SLC4A9Q96Q91 983 aa17.76■□□□□ 0.43
USP39-207ENST00000450066 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
USP39-207ENST00000450066 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
USP39-207ENST00000450066 NEURL1BA8MQ27 555 aa17.75■□□□□ 0.43
USP39-207ENST00000450066 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
USP39-207ENST00000450066 MYD88Q99836 296 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms