RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 CUL4AQ13619 759 aa13.69□□□□□ -0.22
SYVN1-204ENST00000449943 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
SYVN1-204ENST00000449943 CWC27Q6UX04 472 aaKnown RBP13.69□□□□□ -0.22
SYVN1-204ENST00000449943 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
SYVN1-204ENST00000449943 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
SYVN1-204ENST00000449943 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
SYVN1-204ENST00000449943 PTMAP06454 111 aaKnown RBP13.68□□□□□ -0.22
SYVN1-204ENST00000449943 MPNDQ8N594 471 aa13.68□□□□□ -0.22
SYVN1-204ENST00000449943 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
SYVN1-204ENST00000449943 CHPF2Q9P2E5 772 aa13.68□□□□□ -0.22
SYVN1-204ENST00000449943 R3HCC1Q9Y3T6 440 aaKnown RBP13.68□□□□□ -0.22
SYVN1-204ENST00000449943 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
SYVN1-204ENST00000449943 NALCNQ8IZF0 1738 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 CPA1P15085 419 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 PI4KAP2A4QPH2 592 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 PI4KAP1Q8N8J0 262 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
SYVN1-204ENST00000449943 TSPY26PQ9H489 355 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 KCNQ3O43525 872 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
SYVN1-204ENST00000449943 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.66□□□□□ -0.22
SYVN1-204ENST00000449943 TPM2P07951 284 aa13.66□□□□□ -0.22
SYVN1-204ENST00000449943 HSPA4P34932 840 aa13.66□□□□□ -0.22
SYVN1-204ENST00000449943 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
SYVN1-204ENST00000449943 OFD1O75665 1012 aa13.66□□□□□ -0.22
SYVN1-204ENST00000449943 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
SYVN1-204ENST00000449943 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
SYVN1-204ENST00000449943 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 PDLIM2Q96JY6 352 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 RAB11FIP3O75154 756 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 TEFQ10587 303 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 PI4K2BQ8TCG2 481 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
SYVN1-204ENST00000449943 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 NOL7Q9UMY1 257 aaKnown RBP13.65□□□□□ -0.22
SYVN1-204ENST00000449943 KCNA6P17658 529 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 ATF3P18847 181 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 SNX14Q9Y5W7 946 aa13.65□□□□□ -0.22
SYVN1-204ENST00000449943 RRP9O43818 475 aaKnown RBP13.65□□□□□ -0.22
SYVN1-204ENST00000449943 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 SGSM2O43147 1006 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 AK2P54819 239 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 DIAPH3Q9NSV4 1193 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.64□□□□□ -0.23
SYVN1-204ENST00000449943 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
SYVN1-204ENST00000449943 TBX22Q9Y458 520 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 DIP2AQ14689 1571 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 RAD50Q92878 1312 aa13.64□□□□□ -0.23
SYVN1-204ENST00000449943 AOX1Q06278 1338 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
SYVN1-204ENST00000449943 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 FIBPO43427 364 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 FAM208AQ9UK61 1670 aaKnown RBP13.63□□□□□ -0.23
SYVN1-204ENST00000449943 HS1BP3Q53T59 392 aa13.63□□□□□ -0.23
SYVN1-204ENST00000449943 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 POLA2Q14181 598 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 SMC3Q9UQE7 1217 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 LRRC59Q96AG4 307 aaKnown RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 LSG1Q9H089 658 aaKnown RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 PHF14O94880 888 aa13.62□□□□□ -0.23
SYVN1-204ENST00000449943 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
SYVN1-204ENST00000449943 KCNJ4P48050 445 aa13.61□□□□□ -0.23
SYVN1-204ENST00000449943 RUFY3Q7L099 469 aa13.61□□□□□ -0.23
SYVN1-204ENST00000449943 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
SYVN1-204ENST00000449943 PRPF40BQ6NWY9 871 aaKnown RBP13.61□□□□□ -0.23
SYVN1-204ENST00000449943 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
SYVN1-204ENST00000449943 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
SYVN1-204ENST00000449943 JAKMIP1Q96N16 626 aaKnown RBP13.6□□□□□ -0.23
SYVN1-204ENST00000449943 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 LARGE1O95461 756 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 ZSCAN22P10073 491 aaPredicted RBP13.6□□□□□ -0.23
SYVN1-204ENST00000449943 CLASRPQ8N2M8 674 aaKnown RBP13.6□□□□□ -0.23
SYVN1-204ENST00000449943 STX6O43752 255 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 IFIT2P09913 472 aaKnown RBP13.6□□□□□ -0.23
SYVN1-204ENST00000449943 SYT1P21579 422 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 BABAM1Q9NWV8 329 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 USP25Q9UHP3 1055 aa13.6□□□□□ -0.23
SYVN1-204ENST00000449943 PTH1RQ03431 593 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
SYVN1-204ENST00000449943 FAM13BQ9NYF5 915 aa13.59□□□□□ -0.23
SYVN1-204ENST00000449943 MAP3K2Q9Y2U5 619 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms