RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KIF1BPQ96EK5 621 aa14.62□□□□□ -0.07
UBE3B-204ENST00000449510 ZBTB22O15209 634 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 DHX37Q8IY37 1157 aaKnown RBP14.61□□□□□ -0.07
UBE3B-204ENST00000449510 PI4KAP2A4QPH2 592 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 TAF7LQ5H9L4 462 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 PI4KAP1Q8N8J0 262 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 PLEKHF1Q96S99 279 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 NAT10Q9H0A0 1025 aaKnown RBP14.61□□□□□ -0.07
UBE3B-204ENST00000449510 PPP6R1Q9UPN7 881 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 DISP1Q96F81 1524 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 ANKRD36BQ8N2N9 1353 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 RTEL1-TNFRSF6BF6WH68 1400 aa14.61□□□□□ -0.07
UBE3B-204ENST00000449510 POLR3DP05423 398 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-204ENST00000449510 TMC6Q7Z403 805 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 TERF1P54274 439 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
UBE3B-204ENST00000449510 CEP57L1Q8IYX8 460 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 CCDC85AQ96PX6 553 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-204ENST00000449510 SCAND2PQ9GZW5 306 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-204ENST00000449510 PTPRTO14522 1441 aa14.6□□□□□ -0.07
UBE3B-204ENST00000449510 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 LIG1P18858 919 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 NEXNQ0ZGT2 675 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 RBM33Q96EV2 1170 aaKnown RBP14.59□□□□□ -0.07
UBE3B-204ENST00000449510 GTPBP4Q9BZE4 634 aaKnown RBP14.59□□□□□ -0.07
UBE3B-204ENST00000449510 GLRX3O76003 335 aaKnown RBP14.59□□□□□ -0.07
UBE3B-204ENST00000449510 KRT222Q8N1A0 295 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 CHMP4CQ96CF2 233 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 NUP160Q12769 1436 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 CHST3Q7LGC8 479 aa14.59□□□□□ -0.07
UBE3B-204ENST00000449510 ZSCAN31Q96LW9 406 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-204ENST00000449510 PHAXQ9H814 394 aaKnown RBP14.59□□□□□ -0.07
UBE3B-204ENST00000449510 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.07
UBE3B-204ENST00000449510 ELF2Q15723 593 aa14.58□□□□□ -0.07
UBE3B-204ENST00000449510 C1orf141Q5JVX7 400 aa14.58□□□□□ -0.07
UBE3B-204ENST00000449510 TMCO3Q6UWJ1 677 aa14.58□□□□□ -0.07
UBE3B-204ENST00000449510 NDUFB9Q9Y6M9 179 aa14.58□□□□□ -0.08
UBE3B-204ENST00000449510 FSIP1Q8NA03 581 aa14.58□□□□□ -0.08
UBE3B-204ENST00000449510 DNAI1Q9UI46 699 aa14.58□□□□□ -0.08
UBE3B-204ENST00000449510 PDE4CQ08493 712 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 ABTB2Q8N961 1025 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 NOL10Q9BSC4 688 aaKnown RBP14.57□□□□□ -0.08
UBE3B-204ENST00000449510 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
UBE3B-204ENST00000449510 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 ADGRL2O95490 1459 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
UBE3B-204ENST00000449510 SYT10Q6XYQ8 523 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 CCAR1Q8IX12 1150 aaKnown RBP14.57□□□□□ -0.08
UBE3B-204ENST00000449510 CBX8Q9HC52 389 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 SNX14Q9Y5W7 946 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
UBE3B-204ENST00000449510 IBSPP21815 317 aaPredicted RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 DMTNQ08495 405 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 CCDC82Q8N4S0 544 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 AOPEPQ8N6M6 819 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 CPLX3Q8WVH0 158 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 BRF1Q92994 677 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 CFAP45Q9UL16 551 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 CCDC69A6NI79 296 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
UBE3B-204ENST00000449510 LMOD1P29536 600 aaPredicted RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 EIF4A2Q14240 407 aaKnown RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
UBE3B-204ENST00000449510 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 CDC37L1Q7L3B6 337 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 PDLIM2Q96JY6 352 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 CFAP65Q6ZU64 1925 aaKnown RBP14.55□□□□□ -0.08
UBE3B-204ENST00000449510 ATP8B2P98198 1209 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 TIGD1Q96MW7 591 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 ZNF215Q9UL58 517 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-204ENST00000449510 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 PTPRCP08575 1304 aa14.55□□□□□ -0.08
UBE3B-204ENST00000449510 HSP90B2PQ58FF3 399 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 SH2B1Q9NRF2 756 aaPredicted RBP14.54□□□□□ -0.08
UBE3B-204ENST00000449510 OGFRQ9NZT2 677 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 LRRIQ1Q96JM4 1722 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 PIP4K2AP48426 406 aaPredicted RBP14.54□□□□□ -0.08
UBE3B-204ENST00000449510 ANAPC15P60006 121 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 FAM193AP78312 1265 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
UBE3B-204ENST00000449510 PTPN21Q16825 1174 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 MTHFSDQ2M296 383 aaKnown RBP14.54□□□□□ -0.08
UBE3B-204ENST00000449510 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 MPRIPQ6WCQ1 1025 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 ARID5BQ14865 1188 aa14.54□□□□□ -0.08
UBE3B-204ENST00000449510 DDX19AQ9NUU7 478 aaKnown RBP14.54□□□□□ -0.08
UBE3B-204ENST00000449510 LMAN1P49257 510 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 HAND2P61296 217 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 KLHDC4Q8TBB5 520 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 FAM227BQ96M60 508 aa14.53□□□□□ -0.08
UBE3B-204ENST00000449510 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.53□□□□□ -0.08
UBE3B-204ENST00000449510 RALYLQ86SE5 291 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms