RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 CEMIPQ8WUJ3 1361 aa14.46□□□□□ -0.1
SRRT-205ENST00000449389 DPEP1P16444 411 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 USPL1Q5W0Q7 1092 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 TEX13AQ9BXU3 409 aaPredicted RBP14.45□□□□□ -0.1
SRRT-205ENST00000449389 NARFQ9UHQ1 456 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 BCS1LQ9Y276 419 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 HEG1Q9ULI3 1381 aa14.45□□□□□ -0.1
SRRT-205ENST00000449389 POLRMTO00411 1230 aaKnown RBP14.44□□□□□ -0.1
SRRT-205ENST00000449389 FCHSD2O94868 740 aa14.44□□□□□ -0.1
SRRT-205ENST00000449389 TM4SF1P30408 202 aa14.44□□□□□ -0.1
SRRT-205ENST00000449389 ZNF496Q96IT1 587 aaPredicted RBP14.44□□□□□ -0.1
SRRT-205ENST00000449389 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
SRRT-205ENST00000449389 FMNL2Q96PY5 1086 aa14.43□□□□□ -0.1
SRRT-205ENST00000449389 SIPA1L3O60292 1781 aaPredicted RBP14.42□□□□□ -0.1
SRRT-205ENST00000449389 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
SRRT-205ENST00000449389 A0A087WZG4 1122 aa14.42□□□□□ -0.1
SRRT-205ENST00000449389 RTF1Q92541 710 aaKnown RBP14.42□□□□□ -0.1
SRRT-205ENST00000449389 GPBP1L1Q9HC44 474 aaPredicted RBP14.42□□□□□ -0.1
SRRT-205ENST00000449389 BTBD11A6QL63 1104 aa14.41□□□□□ -0.1
SRRT-205ENST00000449389 KCNA3P22001 575 aa14.41□□□□□ -0.1
SRRT-205ENST00000449389 EIF5P55010 431 aaKnown RBP14.41□□□□□ -0.1
SRRT-205ENST00000449389 NFIXQ14938 502 aa14.41□□□□□ -0.1
SRRT-205ENST00000449389 PIM2Q9P1W9 311 aa14.41□□□□□ -0.1
SRRT-205ENST00000449389 HTATSF1O43719 755 aaKnown RBP14.4□□□□□ -0.1
SRRT-205ENST00000449389 ARHGAP27Q6ZUM4 889 aa14.4□□□□□ -0.1
SRRT-205ENST00000449389 BCL2L12Q9HB09 334 aa14.4□□□□□ -0.1
SRRT-205ENST00000449389 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
SRRT-205ENST00000449389 IL6STP40189 918 aaPredicted RBP14.39□□□□□ -0.11
SRRT-205ENST00000449389 DALRD3Q5D0E6 543 aaKnown RBP14.39□□□□□ -0.11
SRRT-205ENST00000449389 BRCA1P38398 1863 aaKnown RBP14.38□□□□□ -0.11
SRRT-205ENST00000449389 KCNQ3O43525 872 aa14.38□□□□□ -0.11
SRRT-205ENST00000449389 SERPINB2P05120 415 aa14.38□□□□□ -0.11
SRRT-205ENST00000449389 NEFMP07197 916 aa14.38□□□□□ -0.11
SRRT-205ENST00000449389 MCM10Q7L590 875 aa14.38□□□□□ -0.11
SRRT-205ENST00000449389 NPM2Q86SE8 214 aaKnown RBP14.38□□□□□ -0.11
SRRT-205ENST00000449389 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
SRRT-205ENST00000449389 CHRNA5P30532 468 aa14.37□□□□□ -0.11
SRRT-205ENST00000449389 ZNF330Q9Y3S2 320 aaPredicted RBP14.37□□□□□ -0.11
SRRT-205ENST00000449389 NRXN2Q9P2S2 1712 aa14.36□□□□□ -0.11
SRRT-205ENST00000449389 A1BGP04217 495 aa14.36□□□□□ -0.11
SRRT-205ENST00000449389 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
SRRT-205ENST00000449389 SNRPA1P09661 255 aaKnown RBP14.35□□□□□ -0.11
SRRT-205ENST00000449389 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
SRRT-205ENST00000449389 BICDL1Q6ZP65 573 aa14.35□□□□□ -0.11
SRRT-205ENST00000449389 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
SRRT-205ENST00000449389 SCN7AQ01118 1682 aa14.35□□□□□ -0.11
SRRT-205ENST00000449389 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
SRRT-205ENST00000449389 TAF7Q15545 349 aaPredicted RBP14.34□□□□□ -0.11
SRRT-205ENST00000449389 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
SRRT-205ENST00000449389 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
SRRT-205ENST00000449389 USP16Q9Y5T5 823 aa14.34□□□□□ -0.11
SRRT-205ENST00000449389 CARMIL3Q8ND23 1372 aa14.34□□□□□ -0.11
SRRT-205ENST00000449389 CAMTA2O94983 1202 aa14.33□□□□□ -0.12
SRRT-205ENST00000449389 C9orf131Q5VYM1 1079 aa14.33□□□□□ -0.12
SRRT-205ENST00000449389 H0YIN7 160 aa14.32□□□□□ -0.12
SRRT-205ENST00000449389 RALBP1Q15311 655 aa14.32□□□□□ -0.12
SRRT-205ENST00000449389 DZIP3Q86Y13 1208 aaKnown RBP14.32□□□□□ -0.12
SRRT-205ENST00000449389 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
SRRT-205ENST00000449389 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
SRRT-205ENST00000449389 PLEKHF1Q96S99 279 aa14.32□□□□□ -0.12
SRRT-205ENST00000449389 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
SRRT-205ENST00000449389 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 KIF3CO14782 793 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 NFE2L2Q16236 605 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 TTLL6Q8N841 843 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 SETDB2Q96T68 719 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
SRRT-205ENST00000449389 PDE6BP35913 854 aa14.3□□□□□ -0.12
SRRT-205ENST00000449389 PRR5LQ6MZQ0 368 aa14.3□□□□□ -0.12
SRRT-205ENST00000449389 RNF181Q9P0P0 153 aa14.3□□□□□ -0.12
SRRT-205ENST00000449389 DLEC1Q9Y238 1755 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 RGL2O15211 777 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 NPHP1O15259 732 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 PIP4K2AP48426 406 aaPredicted RBP14.29□□□□□ -0.12
SRRT-205ENST00000449389 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 CNBD1Q8NA66 436 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 MIS18AQ9NYP9 233 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 ZNF652Q9Y2D9 606 aa14.29□□□□□ -0.12
SRRT-205ENST00000449389 NBPF26B4DH59 902 aa14.28□□□□□ -0.12
SRRT-205ENST00000449389 ST5P78524 1137 aa14.28□□□□□ -0.12
SRRT-205ENST00000449389 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
SRRT-205ENST00000449389 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
SRRT-205ENST00000449389 BCORQ6W2J9 1755 aa14.28□□□□□ -0.12
SRRT-205ENST00000449389 NBPF15Q8N660 670 aa14.28□□□□□ -0.12
SRRT-205ENST00000449389 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
SRRT-205ENST00000449389 ZC3H4Q9UPT8 1303 aaKnown RBP14.27□□□□□ -0.12
SRRT-205ENST00000449389 HSPA6P17066 643 aa14.27□□□□□ -0.13
SRRT-205ENST00000449389 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.13
SRRT-205ENST00000449389 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
SRRT-205ENST00000449389 DLG5Q8TDM6 1919 aa14.26□□□□□ -0.13
SRRT-205ENST00000449389 TOMM70O94826 608 aa14.26□□□□□ -0.13
SRRT-205ENST00000449389 LMNB1P20700 586 aa14.26□□□□□ -0.13
SRRT-205ENST00000449389 EIF4A1P60842 406 aaKnown RBP14.26□□□□□ -0.13
SRRT-205ENST00000449389 RASSF7Q02833 373 aa14.26□□□□□ -0.13
SRRT-205ENST00000449389 NBPF5PQ86XG9 351 aaPredicted RBP14.26□□□□□ -0.13
SRRT-205ENST00000449389 CCDC24Q8N4L8 307 aa14.26□□□□□ -0.13
SRRT-205ENST00000449389 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.135e-11■■■□□ 17.9
SRRT-205ENST00000449389 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms