RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ARHGAP27Q6ZUM4 889 aa19.36■□□□□ 0.69
USP39-206ENST00000448971 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
USP39-206ENST00000448971 VIRMAQ69YN4 1812 aaKnown RBP19.35■□□□□ 0.69
USP39-206ENST00000448971 RNMTO43148 476 aaKnown RBP19.35■□□□□ 0.69
USP39-206ENST00000448971 TOMM70O94826 608 aa19.35■□□□□ 0.69
USP39-206ENST00000448971 PARP3Q9Y6F1 533 aa19.35■□□□□ 0.69
USP39-206ENST00000448971 BRCA1P38398 1863 aaKnown RBP19.35■□□□□ 0.69
USP39-206ENST00000448971 C4AP0C0L4 1744 aa19.34■□□□□ 0.69
USP39-206ENST00000448971 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
USP39-206ENST00000448971 DNAJC5GQ8N7S2 189 aa19.34■□□□□ 0.69
USP39-206ENST00000448971 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
USP39-206ENST00000448971 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
USP39-206ENST00000448971 PTCD1O75127 700 aaKnown RBP19.33■□□□□ 0.68
USP39-206ENST00000448971 SLC52A2Q9HAB3 445 aa19.33■□□□□ 0.68
USP39-206ENST00000448971 LGR6Q9HBX8 967 aa19.33■□□□□ 0.68
USP39-206ENST00000448971 MAPK8IP3Q9UPT6 1336 aa19.32■□□□□ 0.68
USP39-206ENST00000448971 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
USP39-206ENST00000448971 APLP1P51693 650 aa19.32■□□□□ 0.68
USP39-206ENST00000448971 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
USP39-206ENST00000448971 FKBP8Q14318 412 aa19.31■□□□□ 0.68
USP39-206ENST00000448971 SRP68Q9UHB9 627 aaKnown RBP19.31■□□□□ 0.68
USP39-206ENST00000448971 DDR1Q08345 913 aa19.3■□□□□ 0.68
USP39-206ENST00000448971 TEFQ10587 303 aa19.3■□□□□ 0.68
USP39-206ENST00000448971 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.68
USP39-206ENST00000448971 RTF1Q92541 710 aaKnown RBP19.3■□□□□ 0.68
USP39-206ENST00000448971 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
USP39-206ENST00000448971 PIM2Q9P1W9 311 aa19.3■□□□□ 0.68
USP39-206ENST00000448971 USP42Q9H9J4 1324 aaKnown RBP19.29■□□□□ 0.68
USP39-206ENST00000448971 C9orf131Q5VYM1 1079 aa19.29■□□□□ 0.68
USP39-206ENST00000448971 INTS5Q6P9B9 1019 aaKnown RBP19.29■□□□□ 0.68
USP39-206ENST00000448971 ARFGEF1Q9Y6D6 1849 aa19.29■□□□□ 0.68
USP39-206ENST00000448971 TM4SF1P30408 202 aa19.28■□□□□ 0.68
USP39-206ENST00000448971 ANP32CO43423 234 aa19.27■□□□□ 0.68
USP39-206ENST00000448971 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
USP39-206ENST00000448971 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
USP39-206ENST00000448971 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
USP39-206ENST00000448971 CEMIPQ8WUJ3 1361 aa19.26■□□□□ 0.67
USP39-206ENST00000448971 TJP1Q07157 1748 aa19.25■□□□□ 0.67
USP39-206ENST00000448971 SIPA1L3O60292 1781 aaPredicted RBP19.25■□□□□ 0.67
USP39-206ENST00000448971 POLRMTO00411 1230 aaKnown RBP19.25■□□□□ 0.67
USP39-206ENST00000448971 SLC39A6Q13433 755 aa19.25■□□□□ 0.67
USP39-206ENST00000448971 RBM46Q8TBY0 533 aaKnown RBP19.25■□□□□ 0.67
USP39-206ENST00000448971 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
USP39-206ENST00000448971 PCNTO95613 3336 aa19.25■□□□□ 0.67
USP39-206ENST00000448971 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
USP39-206ENST00000448971 CHRNA5P30532 468 aa19.24■□□□□ 0.67
USP39-206ENST00000448971 MCM10Q7L590 875 aa19.24■□□□□ 0.67
USP39-206ENST00000448971 SBF1O95248 1867 aa19.24■□□□□ 0.67
USP39-206ENST00000448971 NFE2L2Q16236 605 aa19.23■□□□□ 0.67
USP39-206ENST00000448971 DNAJC10Q8IXB1 793 aa19.23■□□□□ 0.67
USP39-206ENST00000448971 UBR2Q8IWV8 1755 aa19.23■□□□□ 0.67
USP39-206ENST00000448971 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
USP39-206ENST00000448971 USPL1Q5W0Q7 1092 aa19.22■□□□□ 0.67
USP39-206ENST00000448971 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
USP39-206ENST00000448971 DLG5Q8TDM6 1919 aa19.21■□□□□ 0.67
USP39-206ENST00000448971 HTATSF1O43719 755 aaKnown RBP19.21■□□□□ 0.67
USP39-206ENST00000448971 MYCNP04198 464 aaPredicted RBP19.21■□□□□ 0.67
USP39-206ENST00000448971 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
USP39-206ENST00000448971 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
USP39-206ENST00000448971 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
USP39-206ENST00000448971 ZPR1O75312 459 aa19.2■□□□□ 0.66
USP39-206ENST00000448971 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
USP39-206ENST00000448971 FSTL1Q12841 308 aa19.19■□□□□ 0.66
USP39-206ENST00000448971 RRAGCQ9HB90 399 aa19.19■□□□□ 0.66
USP39-206ENST00000448971 KDM2BQ8NHM5 1336 aa19.19■□□□□ 0.66
USP39-206ENST00000448971 HTRA3P83110 453 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 NFIXQ14938 502 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 ADAMTS8Q9UP79 889 aa19.18■□□□□ 0.66
USP39-206ENST00000448971 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
USP39-206ENST00000448971 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
USP39-206ENST00000448971 WDR90Q96KV7 1748 aa19.17■□□□□ 0.66
USP39-206ENST00000448971 AFDNP55196 1824 aaKnown RBP19.16■□□□□ 0.66
USP39-206ENST00000448971 PRELPP51888 382 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 RIPK4P57078 832 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 JMYQ8N9B5 988 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 KLRG1Q96E93 195 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
USP39-206ENST00000448971 VSIG10Q8N0Z9 540 aa19.15■□□□□ 0.66
USP39-206ENST00000448971 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
USP39-206ENST00000448971 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
USP39-206ENST00000448971 THUMPD2Q9BTF0 503 aaKnown RBP19.15■□□□□ 0.66
USP39-206ENST00000448971 RRP7AQ9Y3A4 280 aaKnown RBP19.15■□□□□ 0.66
USP39-206ENST00000448971 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.66
USP39-206ENST00000448971 SERPINB2P05120 415 aa19.14■□□□□ 0.65
USP39-206ENST00000448971 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
USP39-206ENST00000448971 NEUROD2Q15784 382 aa19.14■□□□□ 0.65
USP39-206ENST00000448971 CCDC184Q52MB2 194 aa19.14■□□□□ 0.65
USP39-206ENST00000448971 RASSF7Q02833 373 aa19.13■□□□□ 0.65
USP39-206ENST00000448971 COL15A1P39059 1388 aa19.13■□□□□ 0.65
USP39-206ENST00000448971 KDM3BQ7LBC6 1761 aa19.12■□□□□ 0.65
USP39-206ENST00000448971 ZC3H4Q9UPT8 1303 aaKnown RBP19.12■□□□□ 0.65
USP39-206ENST00000448971 KCNQ3O43525 872 aa19.12■□□□□ 0.65
USP39-206ENST00000448971 TAF7Q15545 349 aaPredicted RBP19.12■□□□□ 0.65
USP39-206ENST00000448971 PNISRQ8TF01 805 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms