RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ANP32AP39687 249 aaKnown RBP13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 FLIIQ13045 1269 aa13.28□□□□□ -0.28
VIPAS39-203ENST00000448935 LTBP4Q8N2S1 1624 aa13.27□□□□□ -0.28
VIPAS39-203ENST00000448935 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-203ENST00000448935 TOM1L2Q6ZVM7 507 aa13.27□□□□□ -0.29
VIPAS39-203ENST00000448935 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
VIPAS39-203ENST00000448935 CREBZFQ9NS37 354 aa13.27□□□□□ -0.29
VIPAS39-203ENST00000448935 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-203ENST00000448935 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-203ENST00000448935 SKAP1Q86WV1 359 aa13.26□□□□□ -0.29
VIPAS39-203ENST00000448935 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-203ENST00000448935 CARD10Q9BWT7 1032 aa13.26□□□□□ -0.29
VIPAS39-203ENST00000448935 MRC1P22897 1456 aa13.25□□□□□ -0.29
VIPAS39-203ENST00000448935 SLC52A2Q9HAB3 445 aa13.25□□□□□ -0.29
VIPAS39-203ENST00000448935 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 EVA1CP58658 441 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 G2E3Q7L622 706 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 PCDH11XQ9BZA7 1347 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 PCDH11YQ9BZA8 1340 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 HEG1Q9ULI3 1381 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 KDM6AO15550 1401 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 GNAI3P08754 354 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-203ENST00000448935 GIGYF1O75420 1035 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-203ENST00000448935 PRR29P0C7W0 189 aa13.23□□□□□ -0.29
VIPAS39-203ENST00000448935 NUCB1Q02818 461 aa13.23□□□□□ -0.29
VIPAS39-203ENST00000448935 HMMRO75330 724 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 IL2RBP14784 551 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 C8orf34Q49A92 452 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 ZCRB1Q8TBF4 217 aaKnown RBP13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 NECTIN2Q92692 538 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 C1orf115Q9H7X2 142 aa13.22□□□□□ -0.29
VIPAS39-203ENST00000448935 CYP27B1O15528 508 aa13.21□□□□□ -0.29
VIPAS39-203ENST00000448935 KCNQ3O43525 872 aa13.21□□□□□ -0.29
VIPAS39-203ENST00000448935 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
VIPAS39-203ENST00000448935 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
VIPAS39-203ENST00000448935 F6X3S4 739 aa13.21□□□□□ -0.3
VIPAS39-203ENST00000448935 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.3
VIPAS39-203ENST00000448935 TTC5Q8N0Z6 440 aa13.21□□□□□ -0.3
VIPAS39-203ENST00000448935 HYPKQ9NX55 129 aa13.21□□□□□ -0.3
VIPAS39-203ENST00000448935 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.3
VIPAS39-203ENST00000448935 PHLPP1O60346 1717 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 GNAI2P04899 355 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 CABP4P57796 275 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 MEIS3Q99687 375 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
VIPAS39-203ENST00000448935 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 TOM1O60784 492 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 PYGBP11216 843 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 SIRT2Q8IXJ6 389 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
VIPAS39-203ENST00000448935 DDX58O95786 925 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 SRCIN1Q9C0H9 1055 aa13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 HDAC5Q9UQL6 1122 aa13.18□□□□□ -0.3
VIPAS39-203ENST00000448935 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 DDRGK1Q96HY6 314 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 BTG4Q9NY30 223 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
VIPAS39-203ENST00000448935 C5P01031 1676 aa13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 PLCH1Q4KWH8 1693 aa13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 COL16A1Q07092 1604 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 WDR70Q9NW82 654 aa13.16□□□□□ -0.3
VIPAS39-203ENST00000448935 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 SLC39A6Q13433 755 aa13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 KSR2Q6VAB6 950 aa13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
VIPAS39-203ENST00000448935 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 ARXQ96QS3 562 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 IBTKQ9P2D0 1353 aaPredicted RBP13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
VIPAS39-203ENST00000448935 ATP8B2P98198 1209 aa13.13□□□□□ -0.31
VIPAS39-203ENST00000448935 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
VIPAS39-203ENST00000448935 ZNF496Q96IT1 587 aaPredicted RBP13.13□□□□□ -0.31
VIPAS39-203ENST00000448935 ADCY9O60503 1353 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms