RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NFIXQ14938 502 aa24.52■■□□□ 1.52
CHCHD3-203ENST00000448878 SMC1BQ8NDV3 1235 aa24.52■■□□□ 1.52
CHCHD3-203ENST00000448878 SOS1Q07889 1333 aaPredicted RBP24.52■■□□□ 1.52
CHCHD3-203ENST00000448878 SCN11AQ9UI33 1791 aa24.52■■□□□ 1.52
CHCHD3-203ENST00000448878 RNMTO43148 476 aaKnown RBP24.51■■□□□ 1.51
CHCHD3-203ENST00000448878 NARFQ9UHQ1 456 aa24.51■■□□□ 1.51
CHCHD3-203ENST00000448878 SERPINB2P05120 415 aa24.5■■□□□ 1.51
CHCHD3-203ENST00000448878 LMNB1P20700 586 aa24.49■■□□□ 1.51
CHCHD3-203ENST00000448878 COL13A1Q5TAT6 717 aaPredicted RBP24.49■■□□□ 1.51
CHCHD3-203ENST00000448878 BICDL1Q6ZP65 573 aa24.49■■□□□ 1.51
CHCHD3-203ENST00000448878 ZBTB1Q9Y2K1 713 aa24.49■■□□□ 1.51
CHCHD3-203ENST00000448878 COL15A1P39059 1388 aa24.49■■□□□ 1.51
CHCHD3-203ENST00000448878 CAPN15O75808 1086 aa24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 SBF1O95248 1867 aa24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 CANXP27824 592 aaKnown RBP24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 C2CD5Q86YS7 1000 aa24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 TTLL6Q8N841 843 aa24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 TNRC6CQ9HCJ0 1690 aaKnown RBP24.48■■□□□ 1.51
CHCHD3-203ENST00000448878 JMYQ8N9B5 988 aa24.47■■□□□ 1.51
CHCHD3-203ENST00000448878 H0YIN7 160 aa24.46■■□□□ 1.51
CHCHD3-203ENST00000448878 VEGFAP15692 232 aaPredicted RBP24.46■■□□□ 1.51
CHCHD3-203ENST00000448878 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
CHCHD3-203ENST00000448878 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.5
CHCHD3-203ENST00000448878 GLTPD2A6NH11 291 aa24.45■■□□□ 1.5
CHCHD3-203ENST00000448878 TTC5Q8N0Z6 440 aa24.44■■□□□ 1.5
CHCHD3-203ENST00000448878 AFDNP55196 1824 aaKnown RBP24.44■■□□□ 1.5
CHCHD3-203ENST00000448878 ZC3H4Q9UPT8 1303 aaKnown RBP24.43■■□□□ 1.5
CHCHD3-203ENST00000448878 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
CHCHD3-203ENST00000448878 ZNF622Q969S3 477 aaKnown RBP eCLIP24.43■■□□□ 1.57e-19■□□□□ 8.6
CHCHD3-203ENST00000448878 BCL2L12Q9HB09 334 aa24.43■■□□□ 1.5
CHCHD3-203ENST00000448878 ZNF219Q9P2Y4 722 aaPredicted RBP24.43■■□□□ 1.5
CHCHD3-203ENST00000448878 ZNF330Q9Y3S2 320 aaPredicted RBP24.43■■□□□ 1.5
CHCHD3-203ENST00000448878 TNS4Q8IZW8 715 aa24.42■■□□□ 1.5
CHCHD3-203ENST00000448878 STARD3NLO95772 234 aa24.41■■□□□ 1.5
CHCHD3-203ENST00000448878 PRELPP51888 382 aa24.41■■□□□ 1.5
CHCHD3-203ENST00000448878 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
CHCHD3-203ENST00000448878 DPY19L2Q6NUT2 758 aa24.4■■□□□ 1.5
CHCHD3-203ENST00000448878 A0A087WZG4 1122 aa24.39■■□□□ 1.49
CHCHD3-203ENST00000448878 NPHP1O15259 732 aa24.39■■□□□ 1.49
CHCHD3-203ENST00000448878 DIAPH1O60610 1272 aaKnown RBP24.39■■□□□ 1.49
CHCHD3-203ENST00000448878 CNGB1Q14028 1251 aaPredicted RBP24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 NPM2Q86SE8 214 aaKnown RBP24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 CCDC24Q8N4L8 307 aa24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 CARMIL3Q8ND23 1372 aa24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 VIRMAQ69YN4 1812 aaKnown RBP24.38■■□□□ 1.49
CHCHD3-203ENST00000448878 NFKBIEO00221 500 aa24.37■■□□□ 1.49
CHCHD3-203ENST00000448878 C21orf2O43822 256 aa24.37■■□□□ 1.49
CHCHD3-203ENST00000448878 TBC1D9BQ66K14 1250 aa24.37■■□□□ 1.49
CHCHD3-203ENST00000448878 MRC1P22897 1456 aa24.37■■□□□ 1.49
CHCHD3-203ENST00000448878 CCDC88AQ3V6T2 1871 aa24.36■■□□□ 1.49
CHCHD3-203ENST00000448878 NRXN2Q9P2S2 1712 aa24.36■■□□□ 1.49
CHCHD3-203ENST00000448878 TEFQ10587 303 aa24.36■■□□□ 1.49
CHCHD3-203ENST00000448878 CC2D1BQ5T0F9 858 aaKnown RBP24.36■■□□□ 1.49
CHCHD3-203ENST00000448878 TBC1D2BQ9UPU7 963 aa24.36■■□□□ 1.49
CHCHD3-203ENST00000448878 PDE6BP35913 854 aa24.35■■□□□ 1.49
CHCHD3-203ENST00000448878 EIF5P55010 431 aaKnown RBP24.35■■□□□ 1.49
CHCHD3-203ENST00000448878 ERFEQ4G0M1 354 aa24.35■■□□□ 1.49
CHCHD3-203ENST00000448878 DLEC1Q9Y238 1755 aa24.34■■□□□ 1.49
CHCHD3-203ENST00000448878 HSPA1AP0DMV8 641 aaKnown RBP24.34■■□□□ 1.49
CHCHD3-203ENST00000448878 HSPA1BP0DMV9 641 aaKnown RBP24.34■■□□□ 1.49
CHCHD3-203ENST00000448878 TIAM2Q8IVF5 1701 aa24.34■■□□□ 1.49
CHCHD3-203ENST00000448878 U2SURPO15042 1029 aaKnown RBP24.33■■□□□ 1.49
CHCHD3-203ENST00000448878 BRIP1Q9BX63 1249 aa24.33■■□□□ 1.49
CHCHD3-203ENST00000448878 ZNF496Q96IT1 587 aaPredicted RBP24.32■■□□□ 1.48
CHCHD3-203ENST00000448878 TEX13AQ9BXU3 409 aaPredicted RBP24.32■■□□□ 1.48
CHCHD3-203ENST00000448878 PDZRN3Q9UPQ7 1066 aa24.32■■□□□ 1.48
CHCHD3-203ENST00000448878 POTECB2RU33 542 aa24.3■■□□□ 1.48
CHCHD3-203ENST00000448878 PRR5LQ6MZQ0 368 aa24.3■■□□□ 1.48
CHCHD3-203ENST00000448878 ZNF790Q6PG37 636 aa24.3■■□□□ 1.48
CHCHD3-203ENST00000448878 CCER1Q8TC90 406 aaPredicted RBP24.3■■□□□ 1.48
CHCHD3-203ENST00000448878 SETDB2Q96T68 719 aa24.3■■□□□ 1.48
CHCHD3-203ENST00000448878 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
CHCHD3-203ENST00000448878 HEG1Q9ULI3 1381 aa24.29■■□□□ 1.48
CHCHD3-203ENST00000448878 IL17REQ8NFR9 667 aa24.28■■□□□ 1.48
CHCHD3-203ENST00000448878 UBR2Q8IWV8 1755 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 A1BGP04217 495 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 IL6STP40189 918 aaPredicted RBP24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 ST5P78524 1137 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 CNBD1Q8NA66 436 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 GAS2L2Q8NHY3 880 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 TAOK3Q9H2K8 898 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 KIF7Q2M1P5 1343 aa24.27■■□□□ 1.48
CHCHD3-203ENST00000448878 DDNO94850 711 aaPredicted RBP24.26■■□□□ 1.47
CHCHD3-203ENST00000448878 CNKSR1Q969H4 720 aa24.26■■□□□ 1.47
CHCHD3-203ENST00000448878 FMNL2Q96PY5 1086 aa24.26■■□□□ 1.47
CHCHD3-203ENST00000448878 CHADLQ6NUI6 762 aa24.25■■□□□ 1.47
CHCHD3-203ENST00000448878 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
CHCHD3-203ENST00000448878 ANKRD31Q8N7Z5 1873 aa24.25■■□□□ 1.47
CHCHD3-203ENST00000448878 DZIP3Q86Y13 1208 aaKnown RBP24.23■■□□□ 1.47
CHCHD3-203ENST00000448878 PCNTO95613 3336 aa24.22■■□□□ 1.47
CHCHD3-203ENST00000448878 BTBD11A6QL63 1104 aa24.22■■□□□ 1.47
CHCHD3-203ENST00000448878 PRPF40BQ6NWY9 871 aaKnown RBP24.22■■□□□ 1.47
CHCHD3-203ENST00000448878 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 CAMTA2O94983 1202 aa24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 POTEIP0CG38 1075 aa24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 POTEJP0CG39 1038 aa24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
CHCHD3-203ENST00000448878 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms