RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 CHRNA5P30532 468 aa13.99□□□□□ -0.17
SSBP3-209ENST00000448572 INTS5Q6P9B9 1019 aaKnown RBP13.99□□□□□ -0.17
SSBP3-209ENST00000448572 TTC5Q8N0Z6 440 aa13.99□□□□□ -0.17
SSBP3-209ENST00000448572 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
SSBP3-209ENST00000448572 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
SSBP3-209ENST00000448572 COL15A1P39059 1388 aa13.98□□□□□ -0.17
SSBP3-209ENST00000448572 TNRC6CQ9HCJ0 1690 aaKnown RBP13.98□□□□□ -0.17
SSBP3-209ENST00000448572 AEBP1Q8IUX7 1158 aa13.98□□□□□ -0.17
SSBP3-209ENST00000448572 SERPINB2P05120 415 aa13.97□□□□□ -0.17
SSBP3-209ENST00000448572 CYP19A1P11511 503 aaPredicted RBP13.97□□□□□ -0.17
SSBP3-209ENST00000448572 IL13P35225 146 aa13.97□□□□□ -0.17
SSBP3-209ENST00000448572 PDE6BP35913 854 aa13.97□□□□□ -0.17
SSBP3-209ENST00000448572 SOGA3Q5TF21 947 aa13.97□□□□□ -0.17
SSBP3-209ENST00000448572 DNAJC10Q8IXB1 793 aa13.97□□□□□ -0.17
SSBP3-209ENST00000448572 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.17
SSBP3-209ENST00000448572 NPHP1O15259 732 aa13.96□□□□□ -0.17
SSBP3-209ENST00000448572 NFIXQ14938 502 aa13.96□□□□□ -0.17
SSBP3-209ENST00000448572 TNS4Q8IZW8 715 aa13.96□□□□□ -0.17
SSBP3-209ENST00000448572 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
SSBP3-209ENST00000448572 C2CD5Q86YS7 1000 aa13.95□□□□□ -0.18
SSBP3-209ENST00000448572 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
SSBP3-209ENST00000448572 TEFQ10587 303 aa13.94□□□□□ -0.18
SSBP3-209ENST00000448572 DIAPH1O60610 1272 aaKnown RBP13.93□□□□□ -0.18
SSBP3-209ENST00000448572 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
SSBP3-209ENST00000448572 ZBTB1Q9Y2K1 713 aa13.93□□□□□ -0.18
SSBP3-209ENST00000448572 MRC1P22897 1456 aa13.93□□□□□ -0.18
SSBP3-209ENST00000448572 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
SSBP3-209ENST00000448572 RASSF7Q02833 373 aa13.92□□□□□ -0.18
SSBP3-209ENST00000448572 GAS2L2Q8NHY3 880 aa13.92□□□□□ -0.18
SSBP3-209ENST00000448572 CNKSR1Q969H4 720 aa13.92□□□□□ -0.18
SSBP3-209ENST00000448572 MYH14Q7Z406 1995 aaKnown RBP13.92□□□□□ -0.18
SSBP3-209ENST00000448572 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
SSBP3-209ENST00000448572 TJP1Q07157 1748 aa13.92□□□□□ -0.18
SSBP3-209ENST00000448572 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
SSBP3-209ENST00000448572 PRELPP51888 382 aa13.91□□□□□ -0.18
SSBP3-209ENST00000448572 ST5P78524 1137 aa13.91□□□□□ -0.18
SSBP3-209ENST00000448572 ERFEQ4G0M1 354 aa13.91□□□□□ -0.18
SSBP3-209ENST00000448572 COL13A1Q5TAT6 717 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-209ENST00000448572 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.18
SSBP3-209ENST00000448572 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
SSBP3-209ENST00000448572 IL6STP40189 918 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-209ENST00000448572 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
SSBP3-209ENST00000448572 HTRA3P83110 453 aa13.9□□□□□ -0.18
SSBP3-209ENST00000448572 SLC39A6Q13433 755 aa13.9□□□□□ -0.18
SSBP3-209ENST00000448572 SETDB2Q96T68 719 aa13.9□□□□□ -0.18
SSBP3-209ENST00000448572 TAOK3Q9H2K8 898 aa13.9□□□□□ -0.18
SSBP3-209ENST00000448572 SCN11AQ9UI33 1791 aa13.9□□□□□ -0.18
SSBP3-209ENST00000448572 LTBP3Q9NS15 1303 aa13.9□□□□□ -0.19
SSBP3-209ENST00000448572 HMOX1P09601 288 aa13.89□□□□□ -0.19
SSBP3-209ENST00000448572 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
SSBP3-209ENST00000448572 BICDL1Q6ZP65 573 aa13.89□□□□□ -0.19
SSBP3-209ENST00000448572 CNBD1Q8NA66 436 aa13.89□□□□□ -0.19
SSBP3-209ENST00000448572 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
SSBP3-209ENST00000448572 GNAT3A8MTJ3 354 aa13.88□□□□□ -0.19
SSBP3-209ENST00000448572 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
SSBP3-209ENST00000448572 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
SSBP3-209ENST00000448572 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
SSBP3-209ENST00000448572 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
SSBP3-209ENST00000448572 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
SSBP3-209ENST00000448572 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-209ENST00000448572 NFKBIEO00221 500 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
SSBP3-209ENST00000448572 STYK1Q6J9G0 422 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 BCL2L12Q9HB09 334 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
SSBP3-209ENST00000448572 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
SSBP3-209ENST00000448572 C21orf2O43822 256 aa13.86□□□□□ -0.19
SSBP3-209ENST00000448572 CAPN15O75808 1086 aa13.86□□□□□ -0.19
SSBP3-209ENST00000448572 MASTLQ96GX5 879 aa13.86□□□□□ -0.19
SSBP3-209ENST00000448572 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 RGL2O15211 777 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 TBC1D9BQ66K14 1250 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 CLEC4GQ6UXB4 293 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 AIDAQ96BJ3 306 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 CFAP53Q96M91 514 aa13.85□□□□□ -0.19
SSBP3-209ENST00000448572 SBF1O95248 1867 aa13.84□□□□□ -0.19
SSBP3-209ENST00000448572 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
SSBP3-209ENST00000448572 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
SSBP3-209ENST00000448572 ZNF496Q96IT1 587 aaPredicted RBP13.84□□□□□ -0.19
SSBP3-209ENST00000448572 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
SSBP3-209ENST00000448572 LDHDQ86WU2 507 aa13.83□□□□□ -0.2
SSBP3-209ENST00000448572 TBC1D2BQ9UPU7 963 aa13.83□□□□□ -0.2
SSBP3-209ENST00000448572 NUDCQ9Y266 331 aa13.83□□□□□ -0.2
SSBP3-209ENST00000448572 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
SSBP3-209ENST00000448572 SRGNP10124 158 aa13.82□□□□□ -0.2
SSBP3-209ENST00000448572 PRPF40BQ6NWY9 871 aaKnown RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
SSBP3-209ENST00000448572 PNMA8AQ86V59 439 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
SSBP3-209ENST00000448572 CCER1Q8TC90 406 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 RTF1Q92541 710 aaKnown RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
SSBP3-209ENST00000448572 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
SSBP3-209ENST00000448572 TIAM2Q8IVF5 1701 aa13.81□□□□□ -0.2
SSBP3-209ENST00000448572 NPR1P16066 1061 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms