RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
CHRD-205ENST00000448472 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
CHRD-205ENST00000448472 RHPN1Q8TCX5 695 aa18.95■□□□□ 0.62
CHRD-205ENST00000448472 SNX14Q9Y5W7 946 aa18.95■□□□□ 0.62
CHRD-205ENST00000448472 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 PIBF1Q8WXW3 757 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 SLC26A8Q96RN1 970 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
CHRD-205ENST00000448472 KIAA0232Q92628 1395 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 NLRP6P59044 892 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 MYRIPQ8NFW9 859 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 LETM1O95202 739 aaPredicted RBP18.94■□□□□ 0.62
CHRD-205ENST00000448472 F13A1P00488 732 aa18.94■□□□□ 0.62
CHRD-205ENST00000448472 HSPA4P34932 840 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 STK3Q13188 491 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 METP08581 1390 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 ATP7BP35670 1465 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 AATKQ6ZMQ8 1374 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 RGS12O14924 1447 aa18.93■□□□□ 0.62
CHRD-205ENST00000448472 KDM4AO75164 1064 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 UVSSAQ2YD98 709 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 ZNF592Q92610 1267 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 LARP1BQ659C4 914 aaKnown RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 EYA1Q99502 592 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 USP44Q9H0E7 712 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 PRR36Q9H6K5 1346 aa18.92■□□□□ 0.62
CHRD-205ENST00000448472 IFIT2P09913 472 aaKnown RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 TAF7Q15545 349 aaPredicted RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 TFIP11Q9UBB9 837 aaKnown RBP18.92■□□□□ 0.62
CHRD-205ENST00000448472 GNAT3A8MTJ3 354 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 IGSF3O75054 1194 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 CCDC192P0DO97 292 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 CYP46A1Q9Y6A2 500 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 FOSBP53539 338 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
CHRD-205ENST00000448472 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 KIF1BPQ96EK5 621 aa18.91■□□□□ 0.62
CHRD-205ENST00000448472 C9orf78Q9NZ63 289 aaPredicted RBP18.91■□□□□ 0.62
CHRD-205ENST00000448472 CPSF1Q10570 1443 aaKnown RBP18.9■□□□□ 0.62
CHRD-205ENST00000448472 LARGE1O95461 756 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 PRIMPOLQ96LW4 560 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 CCDC94Q9BW85 323 aaPredicted RBP18.9■□□□□ 0.62
CHRD-205ENST00000448472 KNDC1Q76NI1 1749 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 SOS1Q07889 1333 aaPredicted RBP18.9■□□□□ 0.62
CHRD-205ENST00000448472 SGSM2O43147 1006 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 FAM69CQ0P6D2 419 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 TRIM5Q9C035 493 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 NAP1L2Q9ULW6 460 aaPredicted RBP18.9■□□□□ 0.62
CHRD-205ENST00000448472 FGD1P98174 961 aa18.9■□□□□ 0.62
CHRD-205ENST00000448472 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
CHRD-205ENST00000448472 CPS1P31327 1500 aa18.89■□□□□ 0.61
CHRD-205ENST00000448472 NBPF7P0C2Y1 421 aaPredicted RBP18.89■□□□□ 0.61
CHRD-205ENST00000448472 PDCL2Q8N4E4 241 aa18.89■□□□□ 0.61
CHRD-205ENST00000448472 CCDC9Q9Y3X0 531 aaKnown RBP18.88■□□□□ 0.61
CHRD-205ENST00000448472 PI4KAP2A4QPH2 592 aa18.88■□□□□ 0.61
CHRD-205ENST00000448472 CEBPZQ03701 1054 aaKnown RBP18.88■□□□□ 0.61
CHRD-205ENST00000448472 PI4KAP1Q8N8J0 262 aa18.88■□□□□ 0.61
CHRD-205ENST00000448472 FBXW7Q969H0 707 aa18.88■□□□□ 0.61
CHRD-205ENST00000448472 RAD50Q92878 1312 aa18.88■□□□□ 0.61
CHRD-205ENST00000448472 C16orf45Q96MC5 204 aaPredicted RBP18.88■□□□□ 0.61
CHRD-205ENST00000448472 PYCARDQ9ULZ3 195 aa18.88■□□□□ 0.61
CHRD-205ENST00000448472 NUP62CLQ9H1M0 184 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 LUZP1Q86V48 1076 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 PTGS1P23219 599 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 KRT85P78386 507 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 ADCK5Q3MIX3 580 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 TNMDQ9H2S6 317 aa18.87■□□□□ 0.61
CHRD-205ENST00000448472 SIL1Q9H173 461 aa18.86■□□□□ 0.61
CHRD-205ENST00000448472 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
CHRD-205ENST00000448472 PA2G4Q9UQ80 394 aaKnown RBP18.86■□□□□ 0.61
CHRD-205ENST00000448472 ARHGAP31Q2M1Z3 1444 aa18.86■□□□□ 0.61
CHRD-205ENST00000448472 RAB11FIP3O75154 756 aa18.86■□□□□ 0.61
CHRD-205ENST00000448472 PTH1RQ03431 593 aa18.85■□□□□ 0.61
CHRD-205ENST00000448472 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
CHRD-205ENST00000448472 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
CHRD-205ENST00000448472 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
CHRD-205ENST00000448472 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
CHRD-205ENST00000448472 KIF20BQ96Q89 1820 aa18.85■□□□□ 0.61
CHRD-205ENST00000448472 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
CHRD-205ENST00000448472 AIMP1Q12904 312 aaKnown RBP18.84■□□□□ 0.61
CHRD-205ENST00000448472 AACSQ86V21 672 aa18.84■□□□□ 0.61
CHRD-205ENST00000448472 GLRX3O76003 335 aaKnown RBP18.84■□□□□ 0.61
CHRD-205ENST00000448472 CCDC186Q7Z3E2 898 aa18.84■□□□□ 0.61
CHRD-205ENST00000448472 TEFQ10587 303 aa18.84■□□□□ 0.61
CHRD-205ENST00000448472 CCDC8Q9H0W5 538 aaPredicted RBP18.84■□□□□ 0.61
CHRD-205ENST00000448472 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
CHRD-205ENST00000448472 SMAP1Q8IYB5 467 aaPredicted RBP18.83■□□□□ 0.61
CHRD-205ENST00000448472 LSG1Q9H089 658 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms