RNA–Protein interactions for RNA: ENST00000448246.1

SP4-204, Transcript of Sp4 transcription factor, humanhuman

TSL 5

Gene SP4, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-204ENST00000448246 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
SP4-204ENST00000448246 ARAP3Q8WWN8 1544 aa12.5□□□□□ -0.41
SP4-204ENST00000448246 DDX46Q7L014 1031 aaKnown RBP12.5□□□□□ -0.41
SP4-204ENST00000448246 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
SP4-204ENST00000448246 CLASP1Q7Z460 1538 aa12.5□□□□□ -0.41
SP4-204ENST00000448246 C6orf229H3BNL8 230 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 RNMTO43148 476 aaKnown RBP12.49□□□□□ -0.41
SP4-204ENST00000448246 FAM98CQ17RN3 349 aaKnown RBP12.49□□□□□ -0.41
SP4-204ENST00000448246 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 BOLA2Q9H3K6 86 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 SEC24BO95487 1268 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 TPM4P67936 248 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 ATP2B2Q01814 1243 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 CWC27Q6UX04 472 aaKnown RBP12.49□□□□□ -0.41
SP4-204ENST00000448246 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 TBC1D32Q96NH3 1257 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 CCDC8Q9H0W5 538 aaPredicted RBP12.49□□□□□ -0.41
SP4-204ENST00000448246 USP21Q9UK80 565 aa12.49□□□□□ -0.41
SP4-204ENST00000448246 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
SP4-204ENST00000448246 MX1P20591 662 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 CREBRFQ8IUR6 639 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 STK11IPQ8N1F8 1099 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 ZNF335Q9H4Z2 1342 aaPredicted RBP12.48□□□□□ -0.41
SP4-204ENST00000448246 FOSBP53539 338 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 CLCN1P35523 988 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 TDO2P48775 406 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 KSR2Q6VAB6 950 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 TFCP2L1Q9NZI6 479 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
SP4-204ENST00000448246 ARID3AQ99856 593 aa12.48□□□□□ -0.41
SP4-204ENST00000448246 XBP1P17861 261 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 TPM2P07951 284 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
SP4-204ENST00000448246 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 AIDAQ96BJ3 306 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
SP4-204ENST00000448246 SLC5A1P13866 664 aa12.46□□□□□ -0.41
SP4-204ENST00000448246 NUCB2P80303 420 aa12.46□□□□□ -0.41
SP4-204ENST00000448246 DZIP3Q86Y13 1208 aaKnown RBP12.46□□□□□ -0.41
SP4-204ENST00000448246 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
SP4-204ENST00000448246 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
SP4-204ENST00000448246 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.41
SP4-204ENST00000448246 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.41
SP4-204ENST00000448246 PRDM15P57071 1507 aaPredicted RBP12.46□□□□□ -0.41
SP4-204ENST00000448246 INSRP06213 1382 aa12.46□□□□□ -0.41
SP4-204ENST00000448246 VAMP4O75379 141 aa12.46□□□□□ -0.42
SP4-204ENST00000448246 LINS1Q8NG48 757 aa12.46□□□□□ -0.42
SP4-204ENST00000448246 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
SP4-204ENST00000448246 MCM2P49736 904 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 RABEP1Q15276 862 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 ZNF790Q6PG37 636 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 MEIS3Q99687 375 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 CYP46A1Q9Y6A2 500 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 ARHGAP31Q2M1Z3 1444 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 ABCC3O15438 1527 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 ALDH1L1O75891 902 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 KDM5CP41229 1560 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 GRM8O00222 908 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
SP4-204ENST00000448246 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
SP4-204ENST00000448246 ADCY10Q96PN6 1610 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 ST5P78524 1137 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 CCDC152Q4G0S7 254 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
SP4-204ENST00000448246 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 KDM4AO75164 1064 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 LGR6Q9HBX8 967 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
SP4-204ENST00000448246 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
SP4-204ENST00000448246 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
SP4-204ENST00000448246 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
SP4-204ENST00000448246 CDC42BPAQ5VT25 1732 aa12.43□□□□□ -0.42
SP4-204ENST00000448246 ECHDC1Q9NTX5 307 aa12.43□□□□□ -0.42
SP4-204ENST00000448246 PDCP20941 246 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
SP4-204ENST00000448246 ZMYND15Q9H091 742 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 CCNL1Q9UK58 526 aaPredicted RBP12.42□□□□□ -0.42
SP4-204ENST00000448246 BCORL1Q5H9F3 1711 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 GNPATO15228 680 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 ATP2B1P20020 1258 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 PLA2R1Q13018 1463 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 UBAC1Q9BSL1 405 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
SP4-204ENST00000448246 TPD52L1Q16890 204 aaPredicted RBP12.42□□□□□ -0.42
SP4-204ENST00000448246 SNRKQ9NRH2 765 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
SP4-204ENST00000448246 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
SP4-204ENST00000448246 CCDC43Q96MW1 224 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms