RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
PBX3-207ENST00000447726 MAP3K5Q99683 1374 aa19.81■□□□□ 0.76
PBX3-207ENST00000447726 FAM208AQ9UK61 1670 aaKnown RBP19.81■□□□□ 0.76
PBX3-207ENST00000447726 LARP6Q9BRS8 491 aaKnown RBP19.81■□□□□ 0.76
PBX3-207ENST00000447726 USP48Q86UV5 1035 aa19.8■□□□□ 0.76
PBX3-207ENST00000447726 RHPN1Q8TCX5 695 aa19.8■□□□□ 0.76
PBX3-207ENST00000447726 AOX1Q06278 1338 aa19.8■□□□□ 0.76
PBX3-207ENST00000447726 EIF2S2P20042 333 aaKnown RBP19.8■□□□□ 0.76
PBX3-207ENST00000447726 TSPY26PQ9H489 355 aa19.8■□□□□ 0.76
PBX3-207ENST00000447726 NBPF7P0C2Y1 421 aaPredicted RBP19.79■□□□□ 0.76
PBX3-207ENST00000447726 SRGAP3O43295 1099 aa19.79■□□□□ 0.76
PBX3-207ENST00000447726 POLA2Q14181 598 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 LRRC37A3O60309 1634 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 WDR33Q9C0J8 1336 aaKnown RBP19.78■□□□□ 0.76
PBX3-207ENST00000447726 SGSM2O43147 1006 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 TPRNQ4KMQ1 711 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 RAB11FIP3O75154 756 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 SNX14Q9Y5W7 946 aa19.78■□□□□ 0.76
PBX3-207ENST00000447726 RAD50Q92878 1312 aa19.77■□□□□ 0.76
PBX3-207ENST00000447726 EID1Q9Y6B2 187 aa19.77■□□□□ 0.76
PBX3-207ENST00000447726 RPAP1Q9BWH6 1393 aaPredicted RBP19.77■□□□□ 0.76
PBX3-207ENST00000447726 PIK3C2AO00443 1686 aa19.77■□□□□ 0.75
PBX3-207ENST00000447726 GLIPR1L2Q4G1C9 344 aa19.77■□□□□ 0.75
PBX3-207ENST00000447726 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.75
PBX3-207ENST00000447726 CCDC39Q9UFE4 941 aa19.77■□□□□ 0.75
PBX3-207ENST00000447726 NWD1Q149M9 1564 aa19.77■□□□□ 0.75
PBX3-207ENST00000447726 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
PBX3-207ENST00000447726 SYAP1Q96A49 352 aaPredicted RBP19.76■□□□□ 0.75
PBX3-207ENST00000447726 LSG1Q9H089 658 aaKnown RBP19.76■□□□□ 0.75
PBX3-207ENST00000447726 DTNBO60941 627 aa19.76■□□□□ 0.75
PBX3-207ENST00000447726 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
PBX3-207ENST00000447726 CWC27Q6UX04 472 aaKnown RBP19.75■□□□□ 0.75
PBX3-207ENST00000447726 TTC14Q96N46 770 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 ANXA1P04083 346 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 CPA1P15085 419 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 AK2P54819 239 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 RBM10P98175 930 aaKnown RBP19.75■□□□□ 0.75
PBX3-207ENST00000447726 ABTB2Q8N961 1025 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 KIF1BPQ96EK5 621 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
PBX3-207ENST00000447726 EPB41L2O43491 1005 aaKnown RBP19.74■□□□□ 0.75
PBX3-207ENST00000447726 BABAM1Q9NWV8 329 aa19.74■□□□□ 0.75
PBX3-207ENST00000447726 CHPF2Q9P2E5 772 aa19.74■□□□□ 0.75
PBX3-207ENST00000447726 PI4KAP2A4QPH2 592 aa19.74■□□□□ 0.75
PBX3-207ENST00000447726 RUFY3Q7L099 469 aa19.74■□□□□ 0.75
PBX3-207ENST00000447726 PI4KAP1Q8N8J0 262 aa19.74■□□□□ 0.75
PBX3-207ENST00000447726 TERF1P54274 439 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 MPNDQ8N594 471 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 LGR6Q9HBX8 967 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 DIP2AQ14689 1571 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 KCNQ3O43525 872 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 MCM5P33992 734 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 CNTROBQ8N137 903 aa19.73■□□□□ 0.75
PBX3-207ENST00000447726 BEND3Q5T5X7 828 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 VSIG10Q8N0Z9 540 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 PTMAP06454 111 aaKnown RBP19.72■□□□□ 0.75
PBX3-207ENST00000447726 C14orf37Q86TY3 774 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 TCHHQ07283 1943 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 SYT1P21579 422 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 EIF4A1P60842 406 aaKnown RBP19.72■□□□□ 0.75
PBX3-207ENST00000447726 DNAAF4Q8WXU2 420 aa19.72■□□□□ 0.75
PBX3-207ENST00000447726 PHF14O94880 888 aa19.71■□□□□ 0.75
PBX3-207ENST00000447726 ZSCAN22P10073 491 aaPredicted RBP19.71■□□□□ 0.75
PBX3-207ENST00000447726 CACNA1FO60840 1977 aa19.71■□□□□ 0.75
PBX3-207ENST00000447726 LARGE1O95461 756 aa19.71■□□□□ 0.75
PBX3-207ENST00000447726 PDCL3Q9H2J4 239 aa19.71■□□□□ 0.75
PBX3-207ENST00000447726 LIMCH1Q9UPQ0 1083 aa19.71■□□□□ 0.75
PBX3-207ENST00000447726 TMEM87AQ8NBN3 555 aa19.7■□□□□ 0.74
PBX3-207ENST00000447726 STX6O43752 255 aa19.7■□□□□ 0.74
PBX3-207ENST00000447726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.7■□□□□ 0.74
PBX3-207ENST00000447726 UQCRHLA0A096LP55 91 aa19.69■□□□□ 0.74
PBX3-207ENST00000447726 UQCRHP07919 91 aa19.69■□□□□ 0.74
PBX3-207ENST00000447726 CASTP20810 708 aaKnown RBP19.69■□□□□ 0.74
PBX3-207ENST00000447726 OS9Q13438 667 aaPredicted RBP19.69■□□□□ 0.74
PBX3-207ENST00000447726 USP25Q9UHP3 1055 aa19.69■□□□□ 0.74
PBX3-207ENST00000447726 PTH1RQ03431 593 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 CSPP1Q1MSJ5 1256 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 CEMIPQ8WUJ3 1361 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 FAM13BQ9NYF5 915 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 FIBPO43427 364 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 CCDC183Q5T5S1 534 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
PBX3-207ENST00000447726 ADCK5Q3MIX3 580 aa19.67■□□□□ 0.74
PBX3-207ENST00000447726 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
PBX3-207ENST00000447726 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
PBX3-207ENST00000447726 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
PBX3-207ENST00000447726 HCLS1P14317 486 aaPredicted RBP19.67■□□□□ 0.74
PBX3-207ENST00000447726 KCNA6P17658 529 aa19.67■□□□□ 0.74
PBX3-207ENST00000447726 ZNF830Q96NB3 372 aaPredicted RBP19.67■□□□□ 0.74
PBX3-207ENST00000447726 HYPKQ9NX55 129 aa19.67■□□□□ 0.74
PBX3-207ENST00000447726 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.67■□□□□ 0.74
PBX3-207ENST00000447726 F13A1P00488 732 aa19.66■□□□□ 0.74
PBX3-207ENST00000447726 CCDC83Q8IWF9 413 aa19.66■□□□□ 0.74
PBX3-207ENST00000447726 DDX54Q8TDD1 881 aaKnown RBP19.66■□□□□ 0.74
PBX3-207ENST00000447726 DIAPH3Q9NSV4 1193 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms