RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 E2F4Q16254 413 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 HS1BP3Q53T59 392 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
TRIM4-204ENST00000447480 CDK12Q9NYV4 1490 aaPredicted RBP9.51□□□□□ -0.89
TRIM4-204ENST00000447480 NFAT5O94916 1531 aa9.51□□□□□ -0.89
TRIM4-204ENST00000447480 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.51□□□□□ -0.89
TRIM4-204ENST00000447480 ZNF772Q68DY9 489 aaPredicted RBP9.5□□□□□ -0.89
TRIM4-204ENST00000447480 MTERF4Q7Z6M4 381 aaKnown RBP9.5□□□□□ -0.89
TRIM4-204ENST00000447480 DDX17Q92841 729 aaKnown RBP9.5□□□□□ -0.89
TRIM4-204ENST00000447480 SNX21Q969T3 373 aa9.5□□□□□ -0.89
TRIM4-204ENST00000447480 PDCL3Q9H2J4 239 aa9.5□□□□□ -0.89
TRIM4-204ENST00000447480 MYH16Q9H6N6 1097 aa9.5□□□□□ -0.89
TRIM4-204ENST00000447480 XRCC6P12956 609 aaKnown RBP eCLIP9.49□□□□□ -0.89
TRIM4-204ENST00000447480 EVA1CP58658 441 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 C20orf194Q5TEA3 1177 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 ARHGEF25Q86VW2 580 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 ZNF687Q8N1G0 1237 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 CHMP4BQ9H444 224 aaKnown RBP9.49□□□□□ -0.89
TRIM4-204ENST00000447480 KIF16BQ96L93 1317 aa9.49□□□□□ -0.89
TRIM4-204ENST00000447480 IBTKQ9P2D0 1353 aaPredicted RBP9.49□□□□□ -0.89
TRIM4-204ENST00000447480 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-204ENST00000447480 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-204ENST00000447480 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
TRIM4-204ENST00000447480 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-204ENST00000447480 IP6K1Q92551 441 aa9.48□□□□□ -0.89
TRIM4-204ENST00000447480 NGLY1Q96IV0 654 aa9.48□□□□□ -0.89
TRIM4-204ENST00000447480 CDCA7Q9BWT1 371 aaPredicted RBP9.48□□□□□ -0.89
TRIM4-204ENST00000447480 PLCH1Q4KWH8 1693 aa9.48□□□□□ -0.89
TRIM4-204ENST00000447480 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
TRIM4-204ENST00000447480 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
TRIM4-204ENST00000447480 SLC4A3P48751 1232 aa9.47□□□□□ -0.89
TRIM4-204ENST00000447480 CLEC17AQ6ZS10 378 aa9.47□□□□□ -0.89
TRIM4-204ENST00000447480 PKNOX2Q96KN3 472 aa9.47□□□□□ -0.89
TRIM4-204ENST00000447480 GBP4Q96PP9 640 aa9.47□□□□□ -0.89
TRIM4-204ENST00000447480 RRAGDQ9NQL2 400 aaPredicted RBP9.47□□□□□ -0.89
TRIM4-204ENST00000447480 PSDA5PKW4 1024 aaPredicted RBP9.46□□□□□ -0.9
TRIM4-204ENST00000447480 ESPNB1AK53 854 aa9.46□□□□□ -0.9
TRIM4-204ENST00000447480 TRAK2O60296 914 aa9.46□□□□□ -0.9
TRIM4-204ENST00000447480 RGS3P49796 1198 aa9.46□□□□□ -0.9
TRIM4-204ENST00000447480 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
TRIM4-204ENST00000447480 TBC1D2Q9BYX2 928 aa9.46□□□□□ -0.9
TRIM4-204ENST00000447480 TRPC5Q9UL62 973 aaPredicted RBP9.46□□□□□ -0.9
TRIM4-204ENST00000447480 THRAP3Q9Y2W1 955 aaKnown RBP9.46□□□□□ -0.9
TRIM4-204ENST00000447480 MAP3K19Q56UN5 1328 aa9.46□□□□□ -0.9
TRIM4-204ENST00000447480 ZBTB7CA1YPR0 619 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 DIAPH1O60610 1272 aaKnown RBP9.45□□□□□ -0.9
TRIM4-204ENST00000447480 ADAMTS2O95450 1211 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 HOXC9P31274 260 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 MCM5P33992 734 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 TNNT2P45379 298 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-204ENST00000447480 HDAC1Q13547 482 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-204ENST00000447480 UNC5CLQ8IV45 518 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 FNBP4Q8N3X1 1017 aaPredicted RBP9.45□□□□□ -0.9
TRIM4-204ENST00000447480 ANP32BQ92688 251 aaKnown RBP9.45□□□□□ -0.9
TRIM4-204ENST00000447480 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 LMO7Q8WWI1 1683 aa9.45□□□□□ -0.9
TRIM4-204ENST00000447480 IGHDP01880 384 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 RBM25P49756 843 aaKnown RBP9.44□□□□□ -0.9
TRIM4-204ENST00000447480 MTHFSP49914 203 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 CCDC173Q0VFZ6 552 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 SMC5Q8IY18 1101 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 TRIM44Q96DX7 344 aaPredicted RBP9.44□□□□□ -0.9
TRIM4-204ENST00000447480 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 POLKQ9UBT6 870 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 USP21Q9UK80 565 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 WDR17Q8IZU2 1322 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 CRB1P82279 1406 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 SLIT2O94813 1529 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 COL18A1P39060 1754 aa9.44□□□□□ -0.9
TRIM4-204ENST00000447480 COL5A2P05997 1499 aaPredicted RBP9.43□□□□□ -0.9
TRIM4-204ENST00000447480 TOM1L2Q6ZVM7 507 aa9.43□□□□□ -0.9
TRIM4-204ENST00000447480 HSCBQ8IWL3 235 aa9.43□□□□□ -0.9
TRIM4-204ENST00000447480 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
TRIM4-204ENST00000447480 NAP1L5Q96NT1 182 aaPredicted RBP9.43□□□□□ -0.9
TRIM4-204ENST00000447480 PPP1R9BQ96SB3 815 aa9.43□□□□□ -0.9
TRIM4-204ENST00000447480 AXIN2Q9Y2T1 843 aa9.43□□□□□ -0.9
TRIM4-204ENST00000447480 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 NRAPQ86VF7 1730 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
TRIM4-204ENST00000447480 GOLGA6L22H0YM25 854 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 HMGB2P26583 209 aaKnown RBP9.42□□□□□ -0.9
TRIM4-204ENST00000447480 DDIT3P35638 169 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 FOSBP53539 338 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 RRS1Q15050 365 aaKnown RBP9.42□□□□□ -0.9
TRIM4-204ENST00000447480 VPS72Q15906 364 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 WWC1Q8IX03 1113 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 ANKRD24Q8TF21 1146 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 RUNDC1Q96C34 613 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 CARD10Q9BWT7 1032 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 C22orf23Q9BZE7 217 aa9.42□□□□□ -0.9
TRIM4-204ENST00000447480 AFF2P51816 1311 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 FAM83GA6ND36 823 aa9.41□□□□□ -0.9
TRIM4-204ENST00000447480 APAF1O14727 1248 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms