RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 BCS1LQ9Y276 419 aa24.42■■□□□ 1.5
COL9A1-205ENST00000447041 CEMIPQ8WUJ3 1361 aa24.41■■□□□ 1.5
COL9A1-205ENST00000447041 POLRMTO00411 1230 aaKnown RBP24.4■■□□□ 1.5
COL9A1-205ENST00000447041 ZPR1O75312 459 aa24.4■■□□□ 1.5
COL9A1-205ENST00000447041 ZNF790Q6PG37 636 aa24.39■■□□□ 1.49
COL9A1-205ENST00000447041 ZNF496Q96IT1 587 aaPredicted RBP24.39■■□□□ 1.49
COL9A1-205ENST00000447041 NUDCQ9Y266 331 aa24.39■■□□□ 1.49
COL9A1-205ENST00000447041 AFDNP55196 1824 aaKnown RBP24.39■■□□□ 1.49
COL9A1-205ENST00000447041 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
COL9A1-205ENST00000447041 CANXP27824 592 aaKnown RBP24.38■■□□□ 1.49
COL9A1-205ENST00000447041 TM4SF1P30408 202 aa24.38■■□□□ 1.49
COL9A1-205ENST00000447041 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
COL9A1-205ENST00000447041 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
COL9A1-205ENST00000447041 NARFQ9UHQ1 456 aa24.38■■□□□ 1.49
COL9A1-205ENST00000447041 HEG1Q9ULI3 1381 aa24.38■■□□□ 1.49
COL9A1-205ENST00000447041 ARFGEF1Q9Y6D6 1849 aa24.38■■□□□ 1.49
COL9A1-205ENST00000447041 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
COL9A1-205ENST00000447041 KCNA3P22001 575 aa24.37■■□□□ 1.49
COL9A1-205ENST00000447041 NRXN2Q9P2S2 1712 aa24.37■■□□□ 1.49
COL9A1-205ENST00000447041 BCL2L12Q9HB09 334 aa24.36■■□□□ 1.49
COL9A1-205ENST00000447041 SCN7AQ01118 1682 aa24.36■■□□□ 1.49
COL9A1-205ENST00000447041 FCHSD2O94868 740 aa24.35■■□□□ 1.49
COL9A1-205ENST00000447041 GPBP1L1Q9HC44 474 aaPredicted RBP24.35■■□□□ 1.49
COL9A1-205ENST00000447041 STARD3NLO95772 234 aa24.34■■□□□ 1.49
COL9A1-205ENST00000447041 NFIXQ14938 502 aa24.34■■□□□ 1.49
COL9A1-205ENST00000447041 KCNQ3O43525 872 aa24.33■■□□□ 1.49
COL9A1-205ENST00000447041 CHRNA5P30532 468 aa24.33■■□□□ 1.49
COL9A1-205ENST00000447041 BTBD11A6QL63 1104 aa24.32■■□□□ 1.48
COL9A1-205ENST00000447041 EIF5P55010 431 aaKnown RBP24.32■■□□□ 1.48
COL9A1-205ENST00000447041 FMNL2Q96PY5 1086 aa24.32■■□□□ 1.48
COL9A1-205ENST00000447041 ARHGAP27Q6ZUM4 889 aa24.31■■□□□ 1.48
COL9A1-205ENST00000447041 MCM10Q7L590 875 aa24.31■■□□□ 1.48
COL9A1-205ENST00000447041 PIM2Q9P1W9 311 aa24.31■■□□□ 1.48
COL9A1-205ENST00000447041 DLEC1Q9Y238 1755 aa24.29■■□□□ 1.48
COL9A1-205ENST00000447041 TEX13AQ9BXU3 409 aaPredicted RBP24.29■■□□□ 1.48
COL9A1-205ENST00000447041 ZNF330Q9Y3S2 320 aaPredicted RBP24.29■■□□□ 1.48
COL9A1-205ENST00000447041 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
COL9A1-205ENST00000447041 DALRD3Q5D0E6 543 aaKnown RBP24.28■■□□□ 1.48
COL9A1-205ENST00000447041 RTF1Q92541 710 aaKnown RBP24.28■■□□□ 1.48
COL9A1-205ENST00000447041 CARMIL3Q8ND23 1372 aa24.28■■□□□ 1.48
COL9A1-205ENST00000447041 BCORQ6W2J9 1755 aa24.27■■□□□ 1.48
COL9A1-205ENST00000447041 A0A087WZG4 1122 aa24.27■■□□□ 1.48
COL9A1-205ENST00000447041 A1BGP04217 495 aa24.27■■□□□ 1.48
COL9A1-205ENST00000447041 SERPINB2P05120 415 aa24.27■■□□□ 1.48
COL9A1-205ENST00000447041 DLG5Q8TDM6 1919 aa24.26■■□□□ 1.47
COL9A1-205ENST00000447041 BICDL1Q6ZP65 573 aa24.26■■□□□ 1.47
COL9A1-205ENST00000447041 PRAMEF22A3QJZ6 481 aa24.25■■□□□ 1.47
COL9A1-205ENST00000447041 IL6STP40189 918 aaPredicted RBP24.25■■□□□ 1.47
COL9A1-205ENST00000447041 TBC1D2BQ9UPU7 963 aa24.25■■□□□ 1.47
COL9A1-205ENST00000447041 TBC1D9BQ66K14 1250 aa24.24■■□□□ 1.47
COL9A1-205ENST00000447041 ANKRD31Q8N7Z5 1873 aa24.24■■□□□ 1.47
COL9A1-205ENST00000447041 USP16Q9Y5T5 823 aa24.23■■□□□ 1.47
COL9A1-205ENST00000447041 PIP4K2AP48426 406 aaPredicted RBP24.22■■□□□ 1.47
COL9A1-205ENST00000447041 KIF3CO14782 793 aa24.21■■□□□ 1.47
COL9A1-205ENST00000447041 HTATSF1O43719 755 aaKnown RBP24.21■■□□□ 1.47
COL9A1-205ENST00000447041 C9orf131Q5VYM1 1079 aa24.21■■□□□ 1.47
COL9A1-205ENST00000447041 COL11A2P13942 1736 aaPredicted RBP24.21■■□□□ 1.47
COL9A1-205ENST00000447041 CAMTA2O94983 1202 aa24.2■■□□□ 1.46
COL9A1-205ENST00000447041 LAMB4A4D0S4 1761 aa24.2■■□□□ 1.46
COL9A1-205ENST00000447041 SBF1O95248 1867 aa24.19■■□□□ 1.46
COL9A1-205ENST00000447041 KDM3BQ7LBC6 1761 aa24.19■■□□□ 1.46
COL9A1-205ENST00000447041 SNRPA1P09661 255 aaKnown RBP24.18■■□□□ 1.46
COL9A1-205ENST00000447041 NPM2Q86SE8 214 aaKnown RBP24.18■■□□□ 1.46
COL9A1-205ENST00000447041 C2CD5Q86YS7 1000 aa24.18■■□□□ 1.46
COL9A1-205ENST00000447041 PLEKHF1Q96S99 279 aa24.18■■□□□ 1.46
COL9A1-205ENST00000447041 DZIP3Q86Y13 1208 aaKnown RBP24.17■■□□□ 1.46
COL9A1-205ENST00000447041 CCDC24Q8N4L8 307 aa24.17■■□□□ 1.46
COL9A1-205ENST00000447041 NEFMP07197 916 aa24.16■■□□□ 1.46
COL9A1-205ENST00000447041 RASSF7Q02833 373 aa24.16■■□□□ 1.46
COL9A1-205ENST00000447041 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
COL9A1-205ENST00000447041 MIS18AQ9NYP9 233 aa24.16■■□□□ 1.46
COL9A1-205ENST00000447041 RNF181Q9P0P0 153 aa24.16■■□□□ 1.46
COL9A1-205ENST00000447041 TAF7Q15545 349 aaPredicted RBP24.15■■□□□ 1.46
COL9A1-205ENST00000447041 H0YIN7 160 aa24.14■■□□□ 1.45
COL9A1-205ENST00000447041 TTLL6Q8N841 843 aa24.14■■□□□ 1.45
COL9A1-205ENST00000447041 NMRK2Q9NPI5 230 aa24.14■■□□□ 1.45
COL9A1-205ENST00000447041 NFE2L2Q16236 605 aa24.13■■□□□ 1.45
COL9A1-205ENST00000447041 SETDB2Q96T68 719 aa24.13■■□□□ 1.45
COL9A1-205ENST00000447041 THUMPD2Q9BTF0 503 aaKnown RBP24.13■■□□□ 1.45
COL9A1-205ENST00000447041 CEP350Q5VT06 3117 aa24.13■■□□□ 1.45
COL9A1-205ENST00000447041 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
COL9A1-205ENST00000447041 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
COL9A1-205ENST00000447041 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
COL9A1-205ENST00000447041 BRIP1Q9BX63 1249 aa24.12■■□□□ 1.45
COL9A1-205ENST00000447041 TIAM2Q8IVF5 1701 aa24.11■■□□□ 1.45
COL9A1-205ENST00000447041 HSPA6P17066 643 aa24.11■■□□□ 1.45
COL9A1-205ENST00000447041 CNBD1Q8NA66 436 aa24.11■■□□□ 1.45
COL9A1-205ENST00000447041 CACNA1SQ13698 1873 aa24.11■■□□□ 1.45
COL9A1-205ENST00000447041 MAPK8IP3Q9UPT6 1336 aa24.1■■□□□ 1.45
COL9A1-205ENST00000447041 PDE6BP35913 854 aa24.1■■□□□ 1.45
COL9A1-205ENST00000447041 PRELPP51888 382 aa24.1■■□□□ 1.45
COL9A1-205ENST00000447041 ZNF622Q969S3 477 aaKnown RBP eCLIP24.1■■□□□ 1.45
COL9A1-205ENST00000447041 TNRC6CQ9HCJ0 1690 aaKnown RBP24.09■■□□□ 1.45
COL9A1-205ENST00000447041 NPHP1O15259 732 aa24.09■■□□□ 1.45
COL9A1-205ENST00000447041 RALBP1Q15311 655 aa24.08■■□□□ 1.45
COL9A1-205ENST00000447041 CCDC88AQ3V6T2 1871 aa24.08■■□□□ 1.45
COL9A1-205ENST00000447041 ARFGEF2Q9Y6D5 1785 aa24.07■■□□□ 1.44
COL9A1-205ENST00000447041 NFKBIEO00221 500 aa24.07■■□□□ 1.44
COL9A1-205ENST00000447041 ST5P78524 1137 aa24.07■■□□□ 1.44
COL9A1-205ENST00000447041 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms