RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 POLRMTO00411 1230 aaKnown RBP23.72■■□□□ 1.39
RGPD6-204ENST00000446930 KCNA3P22001 575 aa23.72■■□□□ 1.39
RGPD6-204ENST00000446930 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
RGPD6-204ENST00000446930 ZBTB1Q9Y2K1 713 aa23.72■■□□□ 1.39
RGPD6-204ENST00000446930 PPP2R1AP30153 589 aa23.71■■□□□ 1.39
RGPD6-204ENST00000446930 GPBP1L1Q9HC44 474 aaPredicted RBP23.71■■□□□ 1.39
RGPD6-204ENST00000446930 NUDCQ9Y266 331 aa23.71■■□□□ 1.39
RGPD6-204ENST00000446930 HEG1Q9ULI3 1381 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 STARD3NLO95772 234 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 PRKAR2BP31323 418 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 CNGB1Q14028 1251 aaPredicted RBP23.7■■□□□ 1.38
RGPD6-204ENST00000446930 USPL1Q5W0Q7 1092 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 PHACTR3Q96KR7 559 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 TEX13AQ9BXU3 409 aaPredicted RBP23.7■■□□□ 1.38
RGPD6-204ENST00000446930 BCS1LQ9Y276 419 aa23.7■■□□□ 1.38
RGPD6-204ENST00000446930 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.38
RGPD6-204ENST00000446930 ZNF496Q96IT1 587 aaPredicted RBP23.69■■□□□ 1.38
RGPD6-204ENST00000446930 SENP3-EIF4A1A0A087X0R7 540 aa23.68■■□□□ 1.38
RGPD6-204ENST00000446930 FCHSD2O94868 740 aa23.68■■□□□ 1.38
RGPD6-204ENST00000446930 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
RGPD6-204ENST00000446930 PIM2Q9P1W9 311 aa23.68■■□□□ 1.38
RGPD6-204ENST00000446930 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
RGPD6-204ENST00000446930 NFIXQ14938 502 aa23.66■■□□□ 1.38
RGPD6-204ENST00000446930 BCL2L12Q9HB09 334 aa23.66■■□□□ 1.38
RGPD6-204ENST00000446930 CEP350Q5VT06 3117 aa23.66■■□□□ 1.38
RGPD6-204ENST00000446930 DLEC1Q9Y238 1755 aa23.65■■□□□ 1.38
RGPD6-204ENST00000446930 A0A087WZG4 1122 aa23.65■■□□□ 1.38
RGPD6-204ENST00000446930 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
RGPD6-204ENST00000446930 DALRD3Q5D0E6 543 aaKnown RBP23.64■■□□□ 1.37
RGPD6-204ENST00000446930 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
RGPD6-204ENST00000446930 CANXP27824 592 aaKnown RBP23.63■■□□□ 1.37
RGPD6-204ENST00000446930 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
RGPD6-204ENST00000446930 HTATSF1O43719 755 aaKnown RBP23.62■■□□□ 1.37
RGPD6-204ENST00000446930 IL6STP40189 918 aaPredicted RBP23.62■■□□□ 1.37
RGPD6-204ENST00000446930 ARHGAP27Q6ZUM4 889 aa23.62■■□□□ 1.37
RGPD6-204ENST00000446930 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
RGPD6-204ENST00000446930 SERPINB2P05120 415 aa23.59■■□□□ 1.37
RGPD6-204ENST00000446930 CHRNA5P30532 468 aa23.59■■□□□ 1.37
RGPD6-204ENST00000446930 ZNF526Q8TF50 670 aaPredicted RBP23.59■■□□□ 1.37
RGPD6-204ENST00000446930 KIF3CO14782 793 aa23.58■■□□□ 1.37
RGPD6-204ENST00000446930 RTF1Q92541 710 aaKnown RBP23.58■■□□□ 1.37
RGPD6-204ENST00000446930 SBF1O95248 1867 aa23.58■■□□□ 1.36
RGPD6-204ENST00000446930 BCORQ6W2J9 1755 aa23.57■■□□□ 1.36
RGPD6-204ENST00000446930 KCNQ3O43525 872 aa23.55■■□□□ 1.36
RGPD6-204ENST00000446930 ANKRD31Q8N7Z5 1873 aa23.55■■□□□ 1.36
RGPD6-204ENST00000446930 CARMIL3Q8ND23 1372 aa23.54■■□□□ 1.36
RGPD6-204ENST00000446930 MCM10Q7L590 875 aa23.54■■□□□ 1.36
RGPD6-204ENST00000446930 PDZRN3Q9UPQ7 1066 aa23.54■■□□□ 1.36
RGPD6-204ENST00000446930 DLG5Q8TDM6 1919 aa23.54■■□□□ 1.36
RGPD6-204ENST00000446930 A1BGP04217 495 aa23.53■■□□□ 1.36
RGPD6-204ENST00000446930 SNRPA1P09661 255 aaKnown RBP23.53■■□□□ 1.36
RGPD6-204ENST00000446930 C9orf131Q5VYM1 1079 aa23.53■■□□□ 1.36
RGPD6-204ENST00000446930 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
RGPD6-204ENST00000446930 RGL2O15211 777 aa23.52■■□□□ 1.36
RGPD6-204ENST00000446930 CAMTA2O94983 1202 aa23.52■■□□□ 1.36
RGPD6-204ENST00000446930 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
RGPD6-204ENST00000446930 ZC3H4Q9UPT8 1303 aaKnown RBP23.52■■□□□ 1.36
RGPD6-204ENST00000446930 HSPA6P17066 643 aa23.51■■□□□ 1.35
RGPD6-204ENST00000446930 NPM2Q86SE8 214 aaKnown RBP23.51■■□□□ 1.35
RGPD6-204ENST00000446930 BRIP1Q9BX63 1249 aa23.51■■□□□ 1.35
RGPD6-204ENST00000446930 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
RGPD6-204ENST00000446930 LAMB4A4D0S4 1761 aa23.5■■□□□ 1.35
RGPD6-204ENST00000446930 H0YIN7 160 aa23.5■■□□□ 1.35
RGPD6-204ENST00000446930 TTLL6Q8N841 843 aa23.5■■□□□ 1.35
RGPD6-204ENST00000446930 TOMM70O94826 608 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
RGPD6-204ENST00000446930 CLEC4GQ6UXB4 293 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 BICDL1Q6ZP65 573 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 PLEKHF1Q96S99 279 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 ZNF330Q9Y3S2 320 aaPredicted RBP23.49■■□□□ 1.35
RGPD6-204ENST00000446930 KDM3BQ7LBC6 1761 aa23.49■■□□□ 1.35
RGPD6-204ENST00000446930 COL11A2P13942 1736 aaPredicted RBP23.48■■□□□ 1.35
RGPD6-204ENST00000446930 NEFMP07197 916 aa23.48■■□□□ 1.35
RGPD6-204ENST00000446930 PDE6BP35913 854 aa23.48■■□□□ 1.35
RGPD6-204ENST00000446930 DCTN1Q14203 1278 aa23.48■■□□□ 1.35
RGPD6-204ENST00000446930 PRR5LQ6MZQ0 368 aa23.48■■□□□ 1.35
RGPD6-204ENST00000446930 DZIP3Q86Y13 1208 aaKnown RBP23.48■■□□□ 1.35
RGPD6-204ENST00000446930 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
RGPD6-204ENST00000446930 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
RGPD6-204ENST00000446930 SETDB2Q96T68 719 aa23.47■■□□□ 1.35
RGPD6-204ENST00000446930 KDM2BQ8NHM5 1336 aa23.46■■□□□ 1.35
RGPD6-204ENST00000446930 PNISRQ8TF01 805 aaKnown RBP23.46■■□□□ 1.35
RGPD6-204ENST00000446930 PNNQ9H307 717 aaKnown RBP23.46■■□□□ 1.35
RGPD6-204ENST00000446930 PRAMEF22A3QJZ6 481 aa23.45■■□□□ 1.34
RGPD6-204ENST00000446930 CNBD1Q8NA66 436 aa23.45■■□□□ 1.34
RGPD6-204ENST00000446930 NMRK2Q9NPI5 230 aa23.45■■□□□ 1.34
RGPD6-204ENST00000446930 ARFGEF2Q9Y6D5 1785 aa23.45■■□□□ 1.34
RGPD6-204ENST00000446930 LMNB1P20700 586 aa23.44■■□□□ 1.34
RGPD6-204ENST00000446930 ZNF652Q9Y2D9 606 aa23.44■■□□□ 1.34
RGPD6-204ENST00000446930 FER1L6Q2WGJ9 1857 aa23.43■■□□□ 1.34
RGPD6-204ENST00000446930 NBPF26B4DH59 902 aa23.43■■□□□ 1.34
RGPD6-204ENST00000446930 NFE2L2Q16236 605 aa23.43■■□□□ 1.34
RGPD6-204ENST00000446930 NBPF10Q6P3W6 841 aaKnown RBP23.43■■□□□ 1.34
RGPD6-204ENST00000446930 NBPF15Q8N660 670 aa23.43■■□□□ 1.34
RGPD6-204ENST00000446930 RALBP1Q15311 655 aa23.42■■□□□ 1.34
RGPD6-204ENST00000446930 TIAM2Q8IVF5 1701 aa23.42■■□□□ 1.34
RGPD6-204ENST00000446930 CCDC88AQ3V6T2 1871 aa23.41■■□□□ 1.34
RGPD6-204ENST00000446930 RASSF7Q02833 373 aa23.41■■□□□ 1.34
RGPD6-204ENST00000446930 RBM46Q8TBY0 533 aaKnown RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms