RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 AMPHP49418 695 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
LINC00578-204ENST00000446548 CERKQ8TCT0 537 aa11.38□□□□□ -0.59
LINC00578-204ENST00000446548 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
LINC00578-204ENST00000446548 LMO7Q8WWI1 1683 aa11.37□□□□□ -0.59
LINC00578-204ENST00000446548 PLIN1O60240 522 aa11.37□□□□□ -0.59
LINC00578-204ENST00000446548 SULT6B1Q6IMI4 303 aa11.37□□□□□ -0.59
LINC00578-204ENST00000446548 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
LINC00578-204ENST00000446548 IP6K1Q92551 441 aa11.36□□□□□ -0.59
LINC00578-204ENST00000446548 EYA1Q99502 592 aa11.36□□□□□ -0.59
LINC00578-204ENST00000446548 MYH16Q9H6N6 1097 aa11.36□□□□□ -0.59
LINC00578-204ENST00000446548 VIRMAQ69YN4 1812 aaKnown RBP11.36□□□□□ -0.59
LINC00578-204ENST00000446548 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 TESPA1A2RU30 521 aaPredicted RBP11.35□□□□□ -0.59
LINC00578-204ENST00000446548 NEFMP07197 916 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 EXOC6Q8TAG9 804 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
LINC00578-204ENST00000446548 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
LINC00578-204ENST00000446548 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
LINC00578-204ENST00000446548 HRO43593 1189 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 BCAR3O75815 825 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
LINC00578-204ENST00000446548 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 ARHGEF25Q86VW2 580 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 ABCC6O95255 1503 aa11.34□□□□□ -0.59
LINC00578-204ENST00000446548 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 GCP02774 474 aa11.33□□□□□ -0.6
LINC00578-204ENST00000446548 RARSP54136 660 aaKnown RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 BRINP3Q76B58 766 aa11.33□□□□□ -0.6
LINC00578-204ENST00000446548 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 CRBNQ96SW2 442 aa11.33□□□□□ -0.6
LINC00578-204ENST00000446548 THUMPD2Q9BTF0 503 aaKnown RBP11.33□□□□□ -0.6
LINC00578-204ENST00000446548 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
LINC00578-204ENST00000446548 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
LINC00578-204ENST00000446548 EXOSC9Q06265 439 aaKnown RBP11.32□□□□□ -0.6
LINC00578-204ENST00000446548 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
LINC00578-204ENST00000446548 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
LINC00578-204ENST00000446548 RABGEF1Q9UJ41 708 aa11.32□□□□□ -0.6
LINC00578-204ENST00000446548 SPATA31A3Q5VYP0 1347 aa11.32□□□□□ -0.6
LINC00578-204ENST00000446548 FAM83GA6ND36 823 aa11.31□□□□□ -0.6
LINC00578-204ENST00000446548 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
LINC00578-204ENST00000446548 CT47B1P0C2W7 299 aaPredicted RBP11.31□□□□□ -0.6
LINC00578-204ENST00000446548 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
LINC00578-204ENST00000446548 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
LINC00578-204ENST00000446548 CRB1P82279 1406 aa11.31□□□□□ -0.6
LINC00578-204ENST00000446548 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
LINC00578-204ENST00000446548 DCTN1Q14203 1278 aa11.3□□□□□ -0.6
LINC00578-204ENST00000446548 MTHFSDQ2M296 383 aaKnown RBP11.3□□□□□ -0.6
LINC00578-204ENST00000446548 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
LINC00578-204ENST00000446548 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
LINC00578-204ENST00000446548 LTV1Q96GA3 475 aaPredicted RBP11.3□□□□□ -0.6
LINC00578-204ENST00000446548 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
LINC00578-204ENST00000446548 SOS2Q07890 1332 aaPredicted RBP11.3□□□□□ -0.6
LINC00578-204ENST00000446548 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 GNAI1P63096 354 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 SLAIN2Q9P270 581 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
LINC00578-204ENST00000446548 ADAMTS7Q9UKP4 1686 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
LINC00578-204ENST00000446548 PRSS12P56730 875 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 MBIPQ9NS73 344 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
LINC00578-204ENST00000446548 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
LINC00578-204ENST00000446548 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
LINC00578-204ENST00000446548 GAS2L2Q8NHY3 880 aa11.27□□□□□ -0.61
LINC00578-204ENST00000446548 LRRC59Q96AG4 307 aaKnown RBP11.27□□□□□ -0.61
LINC00578-204ENST00000446548 CCDC136Q96JN2 1154 aa11.27□□□□□ -0.61
LINC00578-204ENST00000446548 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
LINC00578-204ENST00000446548 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
LINC00578-204ENST00000446548 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.61
LINC00578-204ENST00000446548 CPDO75976 1380 aa11.27□□□□□ -0.61
LINC00578-204ENST00000446548 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 PDE3AQ14432 1141 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 MCM10Q7L590 875 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 ANKRD24Q8TF21 1146 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 SSH1Q8WYL5 1049 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 LAS1LQ9Y4W2 734 aaKnown RBP11.26□□□□□ -0.61
LINC00578-204ENST00000446548 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
LINC00578-204ENST00000446548 COL22A1Q8NFW1 1626 aaPredicted RBP11.25□□□□□ -0.61
LINC00578-204ENST00000446548 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
LINC00578-204ENST00000446548 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
LINC00578-204ENST00000446548 SCN11AQ9UI33 1791 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 CHL1O00533 1208 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
LINC00578-204ENST00000446548 VAMP4O75379 141 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 RLBP1P12271 317 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 ALDH1L2Q3SY69 923 aa11.24□□□□□ -0.61
LINC00578-204ENST00000446548 LAPTM4BQ86VI4 370 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms