RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 USPL1Q5W0Q7 1092 aa20.34■□□□□ 0.85
UBE2F-216ENST00000445676 POLR3GLQ9BT43 218 aa20.34■□□□□ 0.85
UBE2F-216ENST00000445676 ANKRD31Q8N7Z5 1873 aa20.33■□□□□ 0.85
UBE2F-216ENST00000445676 MRC1P22897 1456 aa20.33■□□□□ 0.85
UBE2F-216ENST00000445676 DNAJC10Q8IXB1 793 aa20.33■□□□□ 0.85
UBE2F-216ENST00000445676 GLTPD2A6NH11 291 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 ZPR1O75312 459 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 LMNB1P20700 586 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 NFIXQ14938 502 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 COL15A1P39059 1388 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
UBE2F-216ENST00000445676 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
UBE2F-216ENST00000445676 HSPA1AP0DMV8 641 aaKnown RBP20.3■□□□□ 0.84
UBE2F-216ENST00000445676 HSPA1BP0DMV9 641 aaKnown RBP20.3■□□□□ 0.84
UBE2F-216ENST00000445676 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
UBE2F-216ENST00000445676 CARMIL3Q8ND23 1372 aa20.3■□□□□ 0.84
UBE2F-216ENST00000445676 COL11A2P13942 1736 aaPredicted RBP20.3■□□□□ 0.84
UBE2F-216ENST00000445676 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
UBE2F-216ENST00000445676 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
UBE2F-216ENST00000445676 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
UBE2F-216ENST00000445676 BCL2L12Q9HB09 334 aa20.28■□□□□ 0.84
UBE2F-216ENST00000445676 NARFQ9UHQ1 456 aa20.28■□□□□ 0.84
UBE2F-216ENST00000445676 NFKBIEO00221 500 aa20.27■□□□□ 0.84
UBE2F-216ENST00000445676 PANK3Q9H999 370 aa20.27■□□□□ 0.84
UBE2F-216ENST00000445676 SLC52A2Q9HAB3 445 aa20.27■□□□□ 0.84
UBE2F-216ENST00000445676 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
UBE2F-216ENST00000445676 SERPINB2P05120 415 aa20.26■□□□□ 0.83
UBE2F-216ENST00000445676 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
UBE2F-216ENST00000445676 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
UBE2F-216ENST00000445676 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
UBE2F-216ENST00000445676 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
UBE2F-216ENST00000445676 POTECB2RU33 542 aa20.25■□□□□ 0.83
UBE2F-216ENST00000445676 IL13P35225 146 aa20.25■□□□□ 0.83
UBE2F-216ENST00000445676 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
UBE2F-216ENST00000445676 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
UBE2F-216ENST00000445676 MORC1Q86VD1 984 aa20.23■□□□□ 0.83
UBE2F-216ENST00000445676 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
UBE2F-216ENST00000445676 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
UBE2F-216ENST00000445676 SLX4Q8IY92 1834 aa20.2■□□□□ 0.82
UBE2F-216ENST00000445676 H0YIN7 160 aa20.2■□□□□ 0.82
UBE2F-216ENST00000445676 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
UBE2F-216ENST00000445676 BICDL1Q6ZP65 573 aa20.18■□□□□ 0.82
UBE2F-216ENST00000445676 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
UBE2F-216ENST00000445676 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
UBE2F-216ENST00000445676 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
UBE2F-216ENST00000445676 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
UBE2F-216ENST00000445676 HSPA5P11021 654 aaKnown RBP20.16■□□□□ 0.82
UBE2F-216ENST00000445676 EIF5P55010 431 aaKnown RBP20.16■□□□□ 0.82
UBE2F-216ENST00000445676 DPY19L2Q6NUT2 758 aa20.16■□□□□ 0.82
UBE2F-216ENST00000445676 C21orf2O43822 256 aa20.15■□□□□ 0.82
UBE2F-216ENST00000445676 HMOX1P09601 288 aa20.15■□□□□ 0.82
UBE2F-216ENST00000445676 ERFEQ4G0M1 354 aa20.15■□□□□ 0.82
UBE2F-216ENST00000445676 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
UBE2F-216ENST00000445676 ZNF622Q969S3 477 aaKnown RBP eCLIP20.15■□□□□ 0.82
UBE2F-216ENST00000445676 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
UBE2F-216ENST00000445676 SCN4AP35499 1836 aa20.14■□□□□ 0.81
UBE2F-216ENST00000445676 POTEIP0CG38 1075 aa20.14■□□□□ 0.81
UBE2F-216ENST00000445676 POTEJP0CG39 1038 aa20.14■□□□□ 0.81
UBE2F-216ENST00000445676 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
UBE2F-216ENST00000445676 CCDC24Q8N4L8 307 aa20.14■□□□□ 0.81
UBE2F-216ENST00000445676 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
UBE2F-216ENST00000445676 MKRN1Q9UHC7 482 aaKnown RBP20.14■□□□□ 0.81
UBE2F-216ENST00000445676 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
UBE2F-216ENST00000445676 PRR5LQ6MZQ0 368 aa20.13■□□□□ 0.81
UBE2F-216ENST00000445676 CHADLQ6NUI6 762 aa20.13■□□□□ 0.81
UBE2F-216ENST00000445676 BRIP1Q9BX63 1249 aa20.13■□□□□ 0.81
UBE2F-216ENST00000445676 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBE2F-216ENST00000445676 PDE6BP35913 854 aa20.11■□□□□ 0.81
UBE2F-216ENST00000445676 PDZRN3Q9UPQ7 1066 aa20.11■□□□□ 0.81
UBE2F-216ENST00000445676 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
UBE2F-216ENST00000445676 A0A087WZG4 1122 aa20.1■□□□□ 0.81
UBE2F-216ENST00000445676 DDNO94850 711 aaPredicted RBP20.1■□□□□ 0.81
UBE2F-216ENST00000445676 STARD3NLO95772 234 aa20.1■□□□□ 0.81
UBE2F-216ENST00000445676 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
UBE2F-216ENST00000445676 TAOK3Q9H2K8 898 aa20.1■□□□□ 0.81
UBE2F-216ENST00000445676 CNTNAP1P78357 1384 aa20.09■□□□□ 0.81
UBE2F-216ENST00000445676 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
UBE2F-216ENST00000445676 FOXN1O15353 648 aa20.09■□□□□ 0.81
UBE2F-216ENST00000445676 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
UBE2F-216ENST00000445676 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
UBE2F-216ENST00000445676 TBC1D2BQ9UPU7 963 aa20.09■□□□□ 0.81
UBE2F-216ENST00000445676 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.8
UBE2F-216ENST00000445676 PASKQ96RG2 1323 aa20.07■□□□□ 0.8
UBE2F-216ENST00000445676 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
UBE2F-216ENST00000445676 ZNF330Q9Y3S2 320 aaPredicted RBP20.07■□□□□ 0.8
UBE2F-216ENST00000445676 CNBD1Q8NA66 436 aa20.06■□□□□ 0.8
UBE2F-216ENST00000445676 CAMTA2O94983 1202 aa20.05■□□□□ 0.8
UBE2F-216ENST00000445676 SRGNP10124 158 aa20.05■□□□□ 0.8
UBE2F-216ENST00000445676 IL6STP40189 918 aaPredicted RBP20.05■□□□□ 0.8
UBE2F-216ENST00000445676 STYK1Q6J9G0 422 aa20.05■□□□□ 0.8
UBE2F-216ENST00000445676 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
UBE2F-216ENST00000445676 CNKSR1Q969H4 720 aa20.05■□□□□ 0.8
UBE2F-216ENST00000445676 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
UBE2F-216ENST00000445676 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
UBE2F-216ENST00000445676 LDHDQ86WU2 507 aa20.04■□□□□ 0.8
UBE2F-216ENST00000445676 L3MBTL3Q96JM7 780 aaPredicted RBP20.04■□□□□ 0.8
UBE2F-216ENST00000445676 PRDM10Q9NQV6 1147 aa20.04■□□□□ 0.8
UBE2F-216ENST00000445676 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
UBE2F-216ENST00000445676 DIAPH1O60610 1272 aaKnown RBP20.03■□□□□ 0.8
UBE2F-216ENST00000445676 A1BGP04217 495 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 200.7 ms