RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 ERC2O15083 957 aa17.39■□□□□ 0.37
NCLP1-201ENST00000445357 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.37
NCLP1-201ENST00000445357 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
NCLP1-201ENST00000445357 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
NCLP1-201ENST00000445357 RAB11FIP3O75154 756 aa17.39■□□□□ 0.37
NCLP1-201ENST00000445357 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
NCLP1-201ENST00000445357 C5P01031 1676 aa17.38■□□□□ 0.37
NCLP1-201ENST00000445357 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
NCLP1-201ENST00000445357 XIRP1Q702N8 1843 aaKnown RBP17.38■□□□□ 0.37
NCLP1-201ENST00000445357 PPP1R42Q7Z4L9 355 aa17.37■□□□□ 0.37
NCLP1-201ENST00000445357 MRC1P22897 1456 aa17.37■□□□□ 0.37
NCLP1-201ENST00000445357 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
NCLP1-201ENST00000445357 KDM6AO15550 1401 aaPredicted RBP17.36■□□□□ 0.37
NCLP1-201ENST00000445357 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
NCLP1-201ENST00000445357 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
NCLP1-201ENST00000445357 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
NCLP1-201ENST00000445357 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
NCLP1-201ENST00000445357 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
NCLP1-201ENST00000445357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.37
NCLP1-201ENST00000445357 CADPS2Q86UW7 1296 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 MEGF6O75095 1541 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 DDX11L8A8MPP1 907 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 ANXA1P04083 346 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 MTX1Q13505 466 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
NCLP1-201ENST00000445357 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
NCLP1-201ENST00000445357 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
NCLP1-201ENST00000445357 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
NCLP1-201ENST00000445357 SRGAP3O43295 1099 aa17.33■□□□□ 0.37
NCLP1-201ENST00000445357 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.37
NCLP1-201ENST00000445357 UBAP1LF5GYI3 381 aa17.33■□□□□ 0.36
NCLP1-201ENST00000445357 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.36
NCLP1-201ENST00000445357 HSP90AA1P07900 732 aaKnown RBP17.33■□□□□ 0.36
NCLP1-201ENST00000445357 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
NCLP1-201ENST00000445357 PROSER3Q2NL68 480 aa17.33■□□□□ 0.36
NCLP1-201ENST00000445357 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.36
NCLP1-201ENST00000445357 RHPN1Q8TCX5 695 aa17.33■□□□□ 0.36
NCLP1-201ENST00000445357 TNPO1Q92973 898 aaKnown RBP17.33■□□□□ 0.36
NCLP1-201ENST00000445357 KIF1BPQ96EK5 621 aa17.33■□□□□ 0.36
NCLP1-201ENST00000445357 CPDO75976 1380 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 SLC52A2Q9HAB3 445 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
NCLP1-201ENST00000445357 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
NCLP1-201ENST00000445357 PHKG2P15735 406 aa17.31■□□□□ 0.36
NCLP1-201ENST00000445357 CHMLP26374 656 aa17.31■□□□□ 0.36
NCLP1-201ENST00000445357 HDAC5Q9UQL6 1122 aa17.31■□□□□ 0.36
NCLP1-201ENST00000445357 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
NCLP1-201ENST00000445357 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
NCLP1-201ENST00000445357 ST18O60284 1047 aa17.31■□□□□ 0.36
NCLP1-201ENST00000445357 PRAMEF22A3QJZ6 481 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 ZNF790Q6PG37 636 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
NCLP1-201ENST00000445357 IL17RAQ96F46 866 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 GBP4Q96PP9 640 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 UTYO14607 1347 aa17.3■□□□□ 0.36
NCLP1-201ENST00000445357 USP42Q9H9J4 1324 aaKnown RBP17.3■□□□□ 0.36
NCLP1-201ENST00000445357 TRAK2O60296 914 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 LAMB4A4D0S4 1761 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
NCLP1-201ENST00000445357 PDIA6Q15084 440 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 CLEC17AQ6ZS10 378 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 PI4K2BQ8TCG2 481 aa17.29■□□□□ 0.36
NCLP1-201ENST00000445357 TRIM6-TRIM34B2RNG4 842 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 PTMSP20962 102 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 ANAPC15P60006 121 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 UNC5CLQ8IV45 518 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
NCLP1-201ENST00000445357 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
NCLP1-201ENST00000445357 GLI3P10071 1580 aa17.27■□□□□ 0.36
NCLP1-201ENST00000445357 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
NCLP1-201ENST00000445357 MCCP23508 829 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
NCLP1-201ENST00000445357 GRM8O00222 908 aa17.25■□□□□ 0.35
NCLP1-201ENST00000445357 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
NCLP1-201ENST00000445357 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
NCLP1-201ENST00000445357 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
NCLP1-201ENST00000445357 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 NFATC2IPQ8NCF5 419 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
NCLP1-201ENST00000445357 CYP27B1O15528 508 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
NCLP1-201ENST00000445357 SSFA2P28290 1259 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 MCM2P49736 904 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 NUCB2P80303 420 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
NCLP1-201ENST00000445357 LARP1Q6PKG0 1096 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms