RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC02549-201ENST00000445346 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
LINC02549-201ENST00000445346 SLC27A3Q5K4L6 730 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 USP31Q70CQ4 1352 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 ABCC6O95255 1503 aa11.24□□□□□ -0.61
LINC02549-201ENST00000445346 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
LINC02549-201ENST00000445346 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
LINC02549-201ENST00000445346 GIGYF1O75420 1035 aaPredicted RBP11.22□□□□□ -0.61
LINC02549-201ENST00000445346 NHSQ6T4R5 1651 aa11.22□□□□□ -0.61
LINC02549-201ENST00000445346 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
LINC02549-201ENST00000445346 SLC12A5Q9H2X9 1139 aa11.22□□□□□ -0.61
LINC02549-201ENST00000445346 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
LINC02549-201ENST00000445346 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 ARHGAP33O14559 1287 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 KCNQ4P56696 695 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 NBR1Q14596 966 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 IP6K1Q92551 441 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
LINC02549-201ENST00000445346 SBNO2Q9Y2G9 1366 aa11.2□□□□□ -0.62
LINC02549-201ENST00000445346 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
LINC02549-201ENST00000445346 CHD4Q14839 1912 aa11.19□□□□□ -0.62
LINC02549-201ENST00000445346 PNPLA7Q6ZV29 1317 aa11.19□□□□□ -0.62
LINC02549-201ENST00000445346 AMPHP49418 695 aa11.19□□□□□ -0.62
LINC02549-201ENST00000445346 BTAF1O14981 1849 aa11.19□□□□□ -0.62
LINC02549-201ENST00000445346 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
LINC02549-201ENST00000445346 PAPPAQ13219 1627 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 GRIN3BO60391 1043 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 PBX2P40425 430 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
LINC02549-201ENST00000445346 COG3Q96JB2 828 aa11.18□□□□□ -0.62
LINC02549-201ENST00000445346 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
LINC02549-201ENST00000445346 MON2Q7Z3U7 1717 aa11.17□□□□□ -0.62
LINC02549-201ENST00000445346 CD163L1Q9NR16 1453 aa11.17□□□□□ -0.62
LINC02549-201ENST00000445346 A0A1W2PP64 1363 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 LTN1O94822 1766 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 HRO43593 1189 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 HOXC9P31274 260 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 PROX2Q3B8N5 592 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 C6orf132Q5T0Z8 1188 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 USP47Q96K76 1375 aa11.16□□□□□ -0.62
LINC02549-201ENST00000445346 MAP3K19Q56UN5 1328 aa11.15□□□□□ -0.62
LINC02549-201ENST00000445346 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
LINC02549-201ENST00000445346 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
LINC02549-201ENST00000445346 PUS7Q96PZ0 661 aaKnown RBP11.15□□□□□ -0.62
LINC02549-201ENST00000445346 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
LINC02549-201ENST00000445346 FBLN1P23142 703 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
LINC02549-201ENST00000445346 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 EPAS1Q99814 870 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 FAM198AQ9UFP1 575 aa11.14□□□□□ -0.63
LINC02549-201ENST00000445346 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC02549-201ENST00000445346 NPDC1Q9NQX5 325 aaPredicted RBP11.13□□□□□ -0.63
LINC02549-201ENST00000445346 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
LINC02549-201ENST00000445346 USP54Q70EL1 1684 aa11.13□□□□□ -0.63
LINC02549-201ENST00000445346 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
LINC02549-201ENST00000445346 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
LINC02549-201ENST00000445346 PTPREP23469 700 aa11.12□□□□□ -0.63
LINC02549-201ENST00000445346 USHBP1Q8N6Y0 703 aa11.12□□□□□ -0.63
LINC02549-201ENST00000445346 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
LINC02549-201ENST00000445346 TONSLQ96HA7 1378 aa11.12□□□□□ -0.63
LINC02549-201ENST00000445346 CGNL1Q0VF96 1302 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
LINC02549-201ENST00000445346 NBPF6Q5VWK0 638 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 MPRIPQ6WCQ1 1025 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 FLAD1Q8NFF5 587 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 NBPF4Q96M43 638 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 GPBP1L1Q9HC44 474 aaPredicted RBP11.11□□□□□ -0.63
LINC02549-201ENST00000445346 NSD2O96028 1365 aa11.11□□□□□ -0.63
LINC02549-201ENST00000445346 SMG6Q86US8 1419 aaKnown RBP11.1□□□□□ -0.63
LINC02549-201ENST00000445346 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
LINC02549-201ENST00000445346 PPP1R3GB7ZBB8 358 aa11.1□□□□□ -0.63
LINC02549-201ENST00000445346 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
LINC02549-201ENST00000445346 CD2APQ9Y5K6 639 aa11.1□□□□□ -0.63
LINC02549-201ENST00000445346 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
LINC02549-201ENST00000445346 MEGF6O75095 1541 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
LINC02549-201ENST00000445346 MAP3K7O43318 606 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 ZNF526Q8TF50 670 aaPredicted RBP11.09□□□□□ -0.63
LINC02549-201ENST00000445346 AK7Q96M32 723 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
LINC02549-201ENST00000445346 GOLGB1Q14789 3259 aaKnown RBP11.08□□□□□ -0.64
LINC02549-201ENST00000445346 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
LINC02549-201ENST00000445346 ATP10DQ9P241 1426 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms