RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CCDC69A6NI79 296 aa21.67■■□□□ 1.06
SHANK3-203ENST00000445220 IRX3P78415 501 aaPredicted RBP21.67■■□□□ 1.06
SHANK3-203ENST00000445220 LRPPRCP42704 1394 aaKnown RBP21.66■■□□□ 1.06
SHANK3-203ENST00000445220 CTNNA3Q9UI47 895 aa21.66■■□□□ 1.06
SHANK3-203ENST00000445220 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
SHANK3-203ENST00000445220 ADGRL1O94910 1474 aa21.66■■□□□ 1.06
SHANK3-203ENST00000445220 NKTRP30414 1462 aaKnown RBP21.66■■□□□ 1.06
SHANK3-203ENST00000445220 CTR9Q6PD62 1173 aa21.66■■□□□ 1.06
SHANK3-203ENST00000445220 SLC3A2P08195 630 aaKnown RBP21.65■■□□□ 1.06
SHANK3-203ENST00000445220 RRS1Q15050 365 aaKnown RBP21.65■■□□□ 1.06
SHANK3-203ENST00000445220 STK11IPQ8N1F8 1099 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 MTMR7Q9Y216 660 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 AACSQ86V21 672 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 KCNH5Q8NCM2 988 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 IL1RAPL2Q9NP60 686 aa21.65■■□□□ 1.06
SHANK3-203ENST00000445220 ZNF165P49910 485 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 GNL3LQ9NVN8 582 aaKnown RBP21.64■■□□□ 1.06
SHANK3-203ENST00000445220 LIMCH1Q9UPQ0 1083 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 SRGAP3O43295 1099 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 UBE2HP62256 183 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 TTC39AQ5SRH9 613 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 RAI14Q9P0K7 980 aa21.64■■□□□ 1.06
SHANK3-203ENST00000445220 MX1P20591 662 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 GBP2P32456 591 aaPredicted RBP21.64■■□□□ 1.05
SHANK3-203ENST00000445220 PAFAH1B1P43034 410 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 STX1AQ16623 288 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 GOLGA6L10A0A0M3HER8 536 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 WASF1Q92558 559 aa21.64■■□□□ 1.05
SHANK3-203ENST00000445220 HSPA2P54652 639 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 CCDC150Q8NCX0 1101 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 TMC6Q7Z403 805 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 CNNM1Q9NRU3 951 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 GDPD2Q9HCC8 539 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 CEP131Q9UPN4 1083 aa21.63■■□□□ 1.05
SHANK3-203ENST00000445220 LUZP1Q86V48 1076 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 HCLS1P14317 486 aaPredicted RBP21.62■■□□□ 1.05
SHANK3-203ENST00000445220 BMP2KLQ5H9B9 411 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 NACAP1Q9BZK3 213 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 FAM135AQ9P2D6 1515 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 CCDC57Q2TAC2 916 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 GNAT3A8MTJ3 354 aa21.62■■□□□ 1.05
SHANK3-203ENST00000445220 CCDC175P0C221 793 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 SMC1AQ14683 1233 aaKnown RBP21.61■■□□□ 1.05
SHANK3-203ENST00000445220 NSD2O96028 1365 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 ZSCAN25Q6NSZ9 544 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
SHANK3-203ENST00000445220 ARFGAP3Q9NP61 516 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 IFFO1Q0D2I5 559 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 STRN4Q9NRL3 753 aa21.61■■□□□ 1.05
SHANK3-203ENST00000445220 SCAF11Q99590 1463 aaKnown RBP21.61■■□□□ 1.05
SHANK3-203ENST00000445220 NF2P35240 595 aa21.6■■□□□ 1.05
SHANK3-203ENST00000445220 PRPF40BQ6NWY9 871 aaKnown RBP21.6■■□□□ 1.05
SHANK3-203ENST00000445220 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
SHANK3-203ENST00000445220 SIL1Q9H173 461 aa21.59■■□□□ 1.05
SHANK3-203ENST00000445220 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
SHANK3-203ENST00000445220 STX6O43752 255 aa21.59■■□□□ 1.05
SHANK3-203ENST00000445220 FEZ1Q99689 392 aa21.59■■□□□ 1.05
SHANK3-203ENST00000445220 GLRX3O76003 335 aaKnown RBP21.59■■□□□ 1.05
SHANK3-203ENST00000445220 ZNF830Q96NB3 372 aaPredicted RBP21.59■■□□□ 1.05
SHANK3-203ENST00000445220 CCDC113Q9H0I3 377 aa21.59■■□□□ 1.05
SHANK3-203ENST00000445220 BMP2KQ9NSY1 1161 aaPredicted RBP21.59■■□□□ 1.05
SHANK3-203ENST00000445220 USO1O60763 962 aaKnown RBP21.58■■□□□ 1.05
SHANK3-203ENST00000445220 RBM25P49756 843 aaKnown RBP21.58■■□□□ 1.05
SHANK3-203ENST00000445220 TBC1D9Q6ZT07 1266 aa21.58■■□□□ 1.05
SHANK3-203ENST00000445220 CCDC91Q7Z6B0 441 aa21.58■■□□□ 1.05
SHANK3-203ENST00000445220 NUP133Q8WUM0 1156 aa21.58■■□□□ 1.05
SHANK3-203ENST00000445220 GNG11P61952 73 aa21.58■■□□□ 1.04
SHANK3-203ENST00000445220 SSH1Q8WYL5 1049 aa21.58■■□□□ 1.04
SHANK3-203ENST00000445220 YEATS4O95619 227 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 RSPH14Q9UHP6 348 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 ZHX3Q9H4I2 956 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 PRDM11Q9NQV5 511 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
SHANK3-203ENST00000445220 TUBB4AP04350 444 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 NUTM1Q86Y26 1132 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 KIF1BPQ96EK5 621 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 NAA15Q9BXJ9 866 aaKnown RBP21.57■■□□□ 1.04
SHANK3-203ENST00000445220 OGFRQ9NZT2 677 aa21.57■■□□□ 1.04
SHANK3-203ENST00000445220 FSIP1Q8NA03 581 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 ZFP91Q96JP5 570 aaPredicted RBP21.56■■□□□ 1.04
SHANK3-203ENST00000445220 GCOM1H8Y6P7 765 aaPredicted RBP21.56■■□□□ 1.04
SHANK3-203ENST00000445220 RAB11FIP3O75154 756 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 SLU7O95391 586 aaKnown RBP21.56■■□□□ 1.04
SHANK3-203ENST00000445220 MYZAPP0CAP1 466 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 FKBP15Q5T1M5 1219 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 KLHL10Q6JEL2 608 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 TMX1Q9H3N1 280 aa21.56■■□□□ 1.04
SHANK3-203ENST00000445220 SPECC1LQ69YQ0 1117 aa21.55■■□□□ 1.04
SHANK3-203ENST00000445220 CCDC12Q8WUD4 166 aaPredicted RBP21.55■■□□□ 1.04
SHANK3-203ENST00000445220 SEPT11Q9NVA2 429 aaKnown RBP21.55■■□□□ 1.04
SHANK3-203ENST00000445220 KIF20AO95235 890 aa21.55■■□□□ 1.04
SHANK3-203ENST00000445220 ASXL2Q76L83 1435 aa21.55■■□□□ 1.04
SHANK3-203ENST00000445220 GIGYF2Q6Y7W6 1299 aaKnown RBP21.55■■□□□ 1.04
SHANK3-203ENST00000445220 SRRTQ9BXP5 876 aaKnown RBP21.55■■□□□ 1.04
SHANK3-203ENST00000445220 SMARCA5O60264 1052 aaPredicted RBP21.55■■□□□ 1.04
SHANK3-203ENST00000445220 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
SHANK3-203ENST00000445220 CEP126Q9P2H0 1117 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms