RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 RHBDD1Q8TEB9 315 aa8.44□□□□□ -1.06
LINC01004-201ENST00000445184 MYCP01106 439 aaPredicted RBP8.43□□□□□ -1.06
LINC01004-201ENST00000445184 ESCO1Q5FWF5 840 aa8.43□□□□□ -1.06
LINC01004-201ENST00000445184 NLRP8Q86W28 1048 aa8.43□□□□□ -1.06
LINC01004-201ENST00000445184 DNAAF2Q9NVR5 837 aaKnown RBP8.43□□□□□ -1.06
LINC01004-201ENST00000445184 ATXN7O15265 892 aaPredicted RBP8.42□□□□□ -1.06
LINC01004-201ENST00000445184 LRP8Q14114 963 aa8.42□□□□□ -1.06
LINC01004-201ENST00000445184 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
LINC01004-201ENST00000445184 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
LINC01004-201ENST00000445184 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
LINC01004-201ENST00000445184 GTF3C3Q9Y5Q9 886 aa8.42□□□□□ -1.06
LINC01004-201ENST00000445184 MAPTP10636 758 aaKnown RBP8.41□□□□□ -1.06
LINC01004-201ENST00000445184 RFC5P40937 340 aa8.41□□□□□ -1.06
LINC01004-201ENST00000445184 CD33P20138 364 aa8.4□□□□□ -1.06
LINC01004-201ENST00000445184 TNP2Q05952 138 aa8.4□□□□□ -1.06
LINC01004-201ENST00000445184 NACC1Q96RE7 527 aa8.4□□□□□ -1.06
LINC01004-201ENST00000445184 PRR12Q9ULL5 1215 aa8.4□□□□□ -1.06
LINC01004-201ENST00000445184 PCBP4P57723 403 aaKnown RBP8.39□□□□□ -1.07
LINC01004-201ENST00000445184 NR1H3Q13133 447 aa8.39□□□□□ -1.07
LINC01004-201ENST00000445184 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
LINC01004-201ENST00000445184 C1orf216Q8TAB5 229 aa8.39□□□□□ -1.07
LINC01004-201ENST00000445184 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
LINC01004-201ENST00000445184 DCDC2BA2VCK2 349 aa8.38□□□□□ -1.07
LINC01004-201ENST00000445184 ALAS2P22557 587 aa8.38□□□□□ -1.07
LINC01004-201ENST00000445184 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
LINC01004-201ENST00000445184 ELOA3DA6NLF2 546 aaPredicted RBP8.37□□□□□ -1.07
LINC01004-201ENST00000445184 KHNYNO15037 678 aaKnown RBP8.37□□□□□ -1.07
LINC01004-201ENST00000445184 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
LINC01004-201ENST00000445184 TLR1Q15399 786 aa8.37□□□□□ -1.07
LINC01004-201ENST00000445184 ELOA3BQ3SY89 546 aa8.37□□□□□ -1.07
LINC01004-201ENST00000445184 ELOA3Q8NG57 546 aa8.37□□□□□ -1.07
LINC01004-201ENST00000445184 HCN2Q9UL51 889 aa8.37□□□□□ -1.07
LINC01004-201ENST00000445184 HYAL3O43820 417 aaPredicted RBP8.36□□□□□ -1.07
LINC01004-201ENST00000445184 ATP4AP20648 1035 aa8.36□□□□□ -1.07
LINC01004-201ENST00000445184 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
LINC01004-201ENST00000445184 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
LINC01004-201ENST00000445184 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
LINC01004-201ENST00000445184 CDCA7Q9BWT1 371 aaPredicted RBP8.36□□□□□ -1.07
LINC01004-201ENST00000445184 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
LINC01004-201ENST00000445184 H2AFB2P0C5Z0 115 aa8.35□□□□□ -1.07
LINC01004-201ENST00000445184 TRIM28Q13263 835 aaKnown RBP8.35□□□□□ -1.07
LINC01004-201ENST00000445184 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
LINC01004-201ENST00000445184 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
LINC01004-201ENST00000445184 A0A1W2PNR3 127 aa8.34□□□□□ -1.07
LINC01004-201ENST00000445184 FAM117AQ9C073 453 aa8.34□□□□□ -1.07
LINC01004-201ENST00000445184 ETNK1Q9HBU6 452 aa8.34□□□□□ -1.07
LINC01004-201ENST00000445184 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
LINC01004-201ENST00000445184 ARSJQ5FYB0 599 aaPredicted RBP8.33□□□□□ -1.08
LINC01004-201ENST00000445184 CCDC85AQ96PX6 553 aaPredicted RBP8.33□□□□□ -1.08
LINC01004-201ENST00000445184 NIFKQ9BYG3 293 aaKnown RBP8.33□□□□□ -1.08
LINC01004-201ENST00000445184 FAM157BP0CG42 384 aa8.32□□□□□ -1.08
LINC01004-201ENST00000445184 MARK1Q9P0L2 795 aa8.32□□□□□ -1.08
LINC01004-201ENST00000445184 GRIK4Q16099 956 aa8.31□□□□□ -1.08
LINC01004-201ENST00000445184 C9orf172C9J069 976 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 M0R082 166 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 USP4Q13107 963 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 NBPF1Q3BBV0 1214 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 SYT9Q86SS6 491 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 ZNF417Q8TAU3 575 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
LINC01004-201ENST00000445184 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 CEP126Q9P2H0 1117 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 GJA3Q9Y6H8 435 aa8.3□□□□□ -1.08
LINC01004-201ENST00000445184 STAU1O95793 577 aaKnown RBP8.29□□□□□ -1.08
LINC01004-201ENST00000445184 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
LINC01004-201ENST00000445184 MDFIQ99750 246 aa8.29□□□□□ -1.08
LINC01004-201ENST00000445184 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
LINC01004-201ENST00000445184 COL9A3Q14050 684 aaPredicted RBP8.28□□□□□ -1.08
LINC01004-201ENST00000445184 MCTP1Q6DN14 999 aa8.28□□□□□ -1.08
LINC01004-201ENST00000445184 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
LINC01004-201ENST00000445184 ADGRE1Q14246 886 aa8.27□□□□□ -1.09
LINC01004-201ENST00000445184 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
LINC01004-201ENST00000445184 ZIC5Q96T25 663 aa8.27□□□□□ -1.09
LINC01004-201ENST00000445184 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
LINC01004-201ENST00000445184 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
LINC01004-201ENST00000445184 SIN3BO75182 1162 aa8.26□□□□□ -1.09
LINC01004-201ENST00000445184 ZDHHC3Q9NYG2 299 aa8.26□□□□□ -1.09
LINC01004-201ENST00000445184 EFSO43281 561 aa8.25□□□□□ -1.09
LINC01004-201ENST00000445184 COBLO75128 1261 aa8.25□□□□□ -1.09
LINC01004-201ENST00000445184 MBTPS1Q14703 1052 aa8.25□□□□□ -1.09
LINC01004-201ENST00000445184 MICALL1Q8N3F8 863 aa8.25□□□□□ -1.09
LINC01004-201ENST00000445184 PAX4O43316 350 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 INHAP05111 366 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 NID1P14543 1247 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 TXKP42681 527 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 TXNRD3Q86VQ6 643 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 SIRT1Q96EB6 747 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 DOLKQ9UPQ8 538 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
LINC01004-201ENST00000445184 ALBP02768 609 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 ELNP15502 786 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 SMTNP53814 917 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 GDF10P55107 478 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 NRG1Q02297 640 aaPredicted RBP8.23□□□□□ -1.09
LINC01004-201ENST00000445184 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 TP53INP1Q96A56 240 aa8.23□□□□□ -1.09
LINC01004-201ENST00000445184 SCNN1DP51172 638 aa8.22□□□□□ -1.09
LINC01004-201ENST00000445184 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms