RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PNMA6EA0A0J9YXQ4 647 aa16.94■□□□□ 0.3
RBM39-216ENST00000444878 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
RBM39-216ENST00000444878 ZNF790Q6PG37 636 aa16.94■□□□□ 0.3
RBM39-216ENST00000444878 NFATC2IPQ8NCF5 419 aa16.94■□□□□ 0.3
RBM39-216ENST00000444878 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
RBM39-216ENST00000444878 RBM25P49756 843 aaKnown RBP16.93■□□□□ 0.3
RBM39-216ENST00000444878 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
RBM39-216ENST00000444878 TBC1D2Q9BYX2 928 aa16.93■□□□□ 0.3
RBM39-216ENST00000444878 SLC39A6Q13433 755 aa16.93■□□□□ 0.3
RBM39-216ENST00000444878 ADCY9O60503 1353 aa16.92■□□□□ 0.3
RBM39-216ENST00000444878 DCAF5Q96JK2 942 aa16.92■□□□□ 0.3
RBM39-216ENST00000444878 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
RBM39-216ENST00000444878 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
RBM39-216ENST00000444878 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
RBM39-216ENST00000444878 CYP27B1O15528 508 aa16.91■□□□□ 0.3
RBM39-216ENST00000444878 HSP90AB1P08238 724 aaKnown RBP16.91■□□□□ 0.3
RBM39-216ENST00000444878 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
RBM39-216ENST00000444878 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
RBM39-216ENST00000444878 C5P01031 1676 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 KSR2Q6VAB6 950 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 TOM1L2Q6ZVM7 507 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 DDX21Q9NR30 783 aaKnown RBP eCLIP16.9■□□□□ 0.3
RBM39-216ENST00000444878 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
RBM39-216ENST00000444878 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
RBM39-216ENST00000444878 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
RBM39-216ENST00000444878 SSH3Q8TE77 659 aa16.9■□□□□ 0.3
RBM39-216ENST00000444878 PPP1R42Q7Z4L9 355 aa16.89■□□□□ 0.29
RBM39-216ENST00000444878 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
RBM39-216ENST00000444878 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
RBM39-216ENST00000444878 DDX58O95786 925 aaKnown RBP16.88■□□□□ 0.29
RBM39-216ENST00000444878 SDSP20132 328 aa16.88■□□□□ 0.29
RBM39-216ENST00000444878 PDE1AP54750 535 aa16.88■□□□□ 0.29
RBM39-216ENST00000444878 MRC1P22897 1456 aa16.88■□□□□ 0.29
RBM39-216ENST00000444878 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
RBM39-216ENST00000444878 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
RBM39-216ENST00000444878 NHSL1Q5SYE7 1610 aa16.87■□□□□ 0.29
RBM39-216ENST00000444878 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
RBM39-216ENST00000444878 CABP4P57796 275 aa16.87■□□□□ 0.29
RBM39-216ENST00000444878 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
RBM39-216ENST00000444878 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
RBM39-216ENST00000444878 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
RBM39-216ENST00000444878 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
RBM39-216ENST00000444878 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
RBM39-216ENST00000444878 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
RBM39-216ENST00000444878 POLA2Q14181 598 aa16.86■□□□□ 0.29
RBM39-216ENST00000444878 PDIA6Q15084 440 aa16.86■□□□□ 0.29
RBM39-216ENST00000444878 HSCBQ8IWL3 235 aa16.86■□□□□ 0.29
RBM39-216ENST00000444878 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
RBM39-216ENST00000444878 ADRA2BP18089 450 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 MX1P20591 662 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
RBM39-216ENST00000444878 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 SNRPA1P09661 255 aaKnown RBP16.85■□□□□ 0.29
RBM39-216ENST00000444878 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 HDAC5Q9UQL6 1122 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 PCDH11XQ9BZA7 1347 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 PCDH11YQ9BZA8 1340 aa16.85■□□□□ 0.29
RBM39-216ENST00000444878 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
RBM39-216ENST00000444878 MYL6BP14649 208 aa16.84■□□□□ 0.29
RBM39-216ENST00000444878 CWF19L2Q2TBE0 894 aaKnown RBP16.84■□□□□ 0.29
RBM39-216ENST00000444878 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
RBM39-216ENST00000444878 EVA1CP58658 441 aa16.83■□□□□ 0.28
RBM39-216ENST00000444878 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
RBM39-216ENST00000444878 CARD10Q9BWT7 1032 aa16.83■□□□□ 0.28
RBM39-216ENST00000444878 STRN4Q9NRL3 753 aa16.83■□□□□ 0.28
RBM39-216ENST00000444878 IL2RBP14784 551 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 TSHZ3Q63HK5 1081 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 SNX21Q969T3 373 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 KIF2CQ99661 725 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 ANTXR1Q9H6X2 564 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 IL1RAPL2Q9NP60 686 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
RBM39-216ENST00000444878 SPRYD3Q8NCJ5 442 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 USP16Q9Y5T5 823 aa16.82■□□□□ 0.28
RBM39-216ENST00000444878 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 HSP90AB4PQ58FF6 505 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 KIF1BPQ96EK5 621 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 STAP2Q9UGK3 403 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 GRM8O00222 908 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 MTX1Q13505 466 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 COPS6Q7L5N1 327 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 RHPN1Q8TCX5 695 aa16.81■□□□□ 0.28
RBM39-216ENST00000444878 LAMB4A4D0S4 1761 aa16.8■□□□□ 0.28
RBM39-216ENST00000444878 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
RBM39-216ENST00000444878 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
RBM39-216ENST00000444878 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
RBM39-216ENST00000444878 REC8O95072 547 aa16.79■□□□□ 0.28
RBM39-216ENST00000444878 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
RBM39-216ENST00000444878 AOX1Q06278 1338 aa16.78■□□□□ 0.28
RBM39-216ENST00000444878 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
RBM39-216ENST00000444878 ERC2O15083 957 aa16.78■□□□□ 0.28
RBM39-216ENST00000444878 DEKP35659 375 aaKnown RBP16.78■□□□□ 0.28
RBM39-216ENST00000444878 OS9Q13438 667 aaPredicted RBP16.78■□□□□ 0.28
RBM39-216ENST00000444878 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
RBM39-216ENST00000444878 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms