RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 TGFB2P61812 414 aa24.17■■□□□ 1.46
VCX3B-203ENST00000444481 NARFQ9UHQ1 456 aa24.17■■□□□ 1.46
VCX3B-203ENST00000444481 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
VCX3B-203ENST00000444481 COL15A1P39059 1388 aa24.16■■□□□ 1.46
VCX3B-203ENST00000444481 FKBP8Q14318 412 aa24.16■■□□□ 1.46
VCX3B-203ENST00000444481 MCM10Q7L590 875 aa24.16■■□□□ 1.46
VCX3B-203ENST00000444481 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
VCX3B-203ENST00000444481 C10orf71Q711Q0 1435 aa24.15■■□□□ 1.46
VCX3B-203ENST00000444481 A0A087WZG4 1122 aa24.14■■□□□ 1.45
VCX3B-203ENST00000444481 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
VCX3B-203ENST00000444481 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.45
VCX3B-203ENST00000444481 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.45
VCX3B-203ENST00000444481 USPL1Q5W0Q7 1092 aa24.14■■□□□ 1.45
VCX3B-203ENST00000444481 MYBBP1AQ9BQG0 1328 aaKnown RBP24.13■■□□□ 1.45
VCX3B-203ENST00000444481 TM4SF1P30408 202 aa24.13■■□□□ 1.45
VCX3B-203ENST00000444481 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
VCX3B-203ENST00000444481 TAF7Q15545 349 aaPredicted RBP24.12■■□□□ 1.45
VCX3B-203ENST00000444481 ZNF784Q8NCA9 323 aaPredicted RBP24.12■■□□□ 1.45
VCX3B-203ENST00000444481 MAPK8IP3Q9UPT6 1336 aa24.11■■□□□ 1.45
VCX3B-203ENST00000444481 KCNQ3O43525 872 aa24.11■■□□□ 1.45
VCX3B-203ENST00000444481 IL6STP40189 918 aaPredicted RBP24.11■■□□□ 1.45
VCX3B-203ENST00000444481 NFE2L2Q16236 605 aa24.11■■□□□ 1.45
VCX3B-203ENST00000444481 PXDNLA1KZ92 1463 aa24.11■■□□□ 1.45
VCX3B-203ENST00000444481 DDR1Q08345 913 aa24.1■■□□□ 1.45
VCX3B-203ENST00000444481 POLRMTO00411 1230 aaKnown RBP24.09■■□□□ 1.45
VCX3B-203ENST00000444481 SNRPA1P09661 255 aaKnown RBP24.09■■□□□ 1.45
VCX3B-203ENST00000444481 DLG5Q8TDM6 1919 aa24.08■■□□□ 1.45
VCX3B-203ENST00000444481 KIAA1551Q9HCM1 1747 aa24.08■■□□□ 1.45
VCX3B-203ENST00000444481 NPM2Q86SE8 214 aaKnown RBP24.08■■□□□ 1.45
VCX3B-203ENST00000444481 PNISRQ8TF01 805 aaKnown RBP24.08■■□□□ 1.45
VCX3B-203ENST00000444481 BCL2L12Q9HB09 334 aa24.07■■□□□ 1.44
VCX3B-203ENST00000444481 A0A0G2JLW4 131 aa24.06■■□□□ 1.44
VCX3B-203ENST00000444481 A1BGP04217 495 aa24.06■■□□□ 1.44
VCX3B-203ENST00000444481 NFIXQ14938 502 aa24.06■■□□□ 1.44
VCX3B-203ENST00000444481 USP16Q9Y5T5 823 aa24.06■■□□□ 1.44
VCX3B-203ENST00000444481 DPEP1P16444 411 aa24.05■■□□□ 1.44
VCX3B-203ENST00000444481 N4BP2Q86UW6 1770 aaPredicted RBP24.05■■□□□ 1.44
VCX3B-203ENST00000444481 PRKRIP1Q9H875 184 aaPredicted RBP24.03■■□□□ 1.44
VCX3B-203ENST00000444481 WWC3Q9ULE0 1092 aa24.03■■□□□ 1.44
VCX3B-203ENST00000444481 ZNF330Q9Y3S2 320 aaPredicted RBP24.03■■□□□ 1.44
VCX3B-203ENST00000444481 BCS1LQ9Y276 419 aa24.02■■□□□ 1.44
VCX3B-203ENST00000444481 SERPINB2P05120 415 aa24.01■■□□□ 1.43
VCX3B-203ENST00000444481 KCNA3P22001 575 aa24.01■■□□□ 1.43
VCX3B-203ENST00000444481 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
VCX3B-203ENST00000444481 TBC1D2BQ9UPU7 963 aa24.01■■□□□ 1.43
VCX3B-203ENST00000444481 NRXN2Q9P2S2 1712 aa24.01■■□□□ 1.43
VCX3B-203ENST00000444481 PRAMEF22A3QJZ6 481 aa24■■□□□ 1.43
VCX3B-203ENST00000444481 MIS18AQ9NYP9 233 aa24■■□□□ 1.43
VCX3B-203ENST00000444481 SCN7AQ01118 1682 aa23.99■■□□□ 1.43
VCX3B-203ENST00000444481 AFDNP55196 1824 aaKnown RBP23.99■■□□□ 1.43
VCX3B-203ENST00000444481 BRCA1P38398 1863 aaKnown RBP23.99■■□□□ 1.43
VCX3B-203ENST00000444481 RIPK4P57078 832 aa23.99■■□□□ 1.43
VCX3B-203ENST00000444481 LMOD3Q0VAK6 560 aa23.99■■□□□ 1.43
VCX3B-203ENST00000444481 WDR43Q15061 677 aaKnown RBP eCLIP23.99■■□□□ 1.43
VCX3B-203ENST00000444481 KDM3BQ7LBC6 1761 aa23.98■■□□□ 1.43
VCX3B-203ENST00000444481 DZIP3Q86Y13 1208 aaKnown RBP23.98■■□□□ 1.43
VCX3B-203ENST00000444481 CAMTA2O94983 1202 aa23.97■■□□□ 1.43
VCX3B-203ENST00000444481 TMPOP42166 694 aaKnown RBP23.97■■□□□ 1.43
VCX3B-203ENST00000444481 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
VCX3B-203ENST00000444481 RGL2O15211 777 aa23.96■■□□□ 1.43
VCX3B-203ENST00000444481 EIF4A1P60842 406 aaKnown RBP23.96■■□□□ 1.43
VCX3B-203ENST00000444481 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
VCX3B-203ENST00000444481 CLEC4GQ6UXB4 293 aa23.96■■□□□ 1.43
VCX3B-203ENST00000444481 BICDL1Q6ZP65 573 aa23.96■■□□□ 1.43
VCX3B-203ENST00000444481 THUMPD2Q9BTF0 503 aaKnown RBP23.96■■□□□ 1.43
VCX3B-203ENST00000444481 BABAM1Q9NWV8 329 aa23.96■■□□□ 1.43
VCX3B-203ENST00000444481 CARMIL3Q8ND23 1372 aa23.95■■□□□ 1.42
VCX3B-203ENST00000444481 GIGYF1O75420 1035 aaPredicted RBP23.95■■□□□ 1.42
VCX3B-203ENST00000444481 RUNDC1Q96C34 613 aa23.95■■□□□ 1.42
VCX3B-203ENST00000444481 SETDB2Q96T68 719 aa23.95■■□□□ 1.42
VCX3B-203ENST00000444481 NBPF26B4DH59 902 aa23.94■■□□□ 1.42
VCX3B-203ENST00000444481 CHRNA5P30532 468 aa23.94■■□□□ 1.42
VCX3B-203ENST00000444481 NBPF10Q6P3W6 841 aaKnown RBP23.94■■□□□ 1.42
VCX3B-203ENST00000444481 NBPF15Q8N660 670 aa23.94■■□□□ 1.42
VCX3B-203ENST00000444481 ZNF652Q9Y2D9 606 aa23.94■■□□□ 1.42
VCX3B-203ENST00000444481 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
VCX3B-203ENST00000444481 LAMB4A4D0S4 1761 aa23.93■■□□□ 1.42
VCX3B-203ENST00000444481 ADCY9O60503 1353 aa23.93■■□□□ 1.42
VCX3B-203ENST00000444481 PIP4K2AP48426 406 aaPredicted RBP23.93■■□□□ 1.42
VCX3B-203ENST00000444481 PDZRN3Q9UPQ7 1066 aa23.93■■□□□ 1.42
VCX3B-203ENST00000444481 BCORQ6W2J9 1755 aa23.93■■□□□ 1.42
VCX3B-203ENST00000444481 ARHGAP27Q6ZUM4 889 aa23.92■■□□□ 1.42
VCX3B-203ENST00000444481 TSPYL4Q9UJ04 414 aa23.92■■□□□ 1.42
VCX3B-203ENST00000444481 ADAMTS8Q9UP79 889 aa23.92■■□□□ 1.42
VCX3B-203ENST00000444481 ATP10DQ9P241 1426 aa23.92■■□□□ 1.42
VCX3B-203ENST00000444481 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
VCX3B-203ENST00000444481 H0YIN7 160 aa23.9■■□□□ 1.42
VCX3B-203ENST00000444481 BRIP1Q9BX63 1249 aa23.9■■□□□ 1.42
VCX3B-203ENST00000444481 PDE6BP35913 854 aa23.89■■□□□ 1.41
VCX3B-203ENST00000444481 PRR5LQ6MZQ0 368 aa23.89■■□□□ 1.41
VCX3B-203ENST00000444481 C2CD5Q86YS7 1000 aa23.88■■□□□ 1.41
VCX3B-203ENST00000444481 RRP7AQ9Y3A4 280 aaKnown RBP23.88■■□□□ 1.41
VCX3B-203ENST00000444481 ERBB4Q15303 1308 aa23.87■■□□□ 1.41
VCX3B-203ENST00000444481 NEUROD2Q15784 382 aa23.87■■□□□ 1.41
VCX3B-203ENST00000444481 CNBD1Q8NA66 436 aa23.87■■□□□ 1.41
VCX3B-203ENST00000444481 DLEC1Q9Y238 1755 aa23.87■■□□□ 1.41
VCX3B-203ENST00000444481 NPHP1O15259 732 aa23.86■■□□□ 1.41
VCX3B-203ENST00000444481 ST5P78524 1137 aa23.86■■□□□ 1.41
VCX3B-203ENST00000444481 TTLL6Q8N841 843 aa23.86■■□□□ 1.41
VCX3B-203ENST00000444481 GPBP1L1Q9HC44 474 aaPredicted RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms