RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 C6orf229H3BNL8 230 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 MARCH6O60337 910 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
SMARCA4-204ENST00000444061 NLRP3Q96P20 1036 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 SLC3A2P08195 630 aaKnown RBP17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 BABAM1Q9NWV8 329 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-204ENST00000444061 RAB11FIP3O75154 756 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 E9PCH4 1651 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 FOXD4L1Q9NU39 408 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 WDR17Q8IZU2 1322 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 CCDC152Q4G0S7 254 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
SMARCA4-204ENST00000444061 AATKQ6ZMQ8 1374 aa17.02■□□□□ 0.31
SMARCA4-204ENST00000444061 KDM4FA0A1W2PPD8 638 aa17.02■□□□□ 0.31
SMARCA4-204ENST00000444061 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 NACAP1Q9BZK3 213 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 NYXQ9GZU5 481 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 SLC5A1P13866 664 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
SMARCA4-204ENST00000444061 H3BQV1 296 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 IFFO2Q5TF58 517 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 UTP14AQ9BVJ6 771 aaKnown RBP17■□□□□ 0.31
SMARCA4-204ENST00000444061 IDH1O75874 414 aaKnown RBP17■□□□□ 0.31
SMARCA4-204ENST00000444061 ALDH1L1O75891 902 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 CWC22Q9HCG8 908 aaKnown RBP17■□□□□ 0.31
SMARCA4-204ENST00000444061 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
SMARCA4-204ENST00000444061 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
SMARCA4-204ENST00000444061 GBP4Q96PP9 640 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 PHKG2P15735 406 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
SMARCA4-204ENST00000444061 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-204ENST00000444061 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
SMARCA4-204ENST00000444061 SART3Q15020 963 aaKnown RBP16.99■□□□□ 0.31
SMARCA4-204ENST00000444061 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
SMARCA4-204ENST00000444061 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
SMARCA4-204ENST00000444061 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 ERBB3P21860 1342 aa16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 VAMP4O75379 141 aa16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■□□ 14.7
SMARCA4-204ENST00000444061 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
SMARCA4-204ENST00000444061 TRIM29Q14134 588 aa16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 GRM8O00222 908 aa16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
SMARCA4-204ENST00000444061 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 SETD1BQ9UPS6 1966 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 HOXB7P09629 217 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 PSMA5P28066 241 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 MRPL50Q8N5N7 158 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
SMARCA4-204ENST00000444061 IKQ13123 557 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 CEP170BQ9Y4F5 1589 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 CHL1O00533 1208 aa16.95■□□□□ 0.3
SMARCA4-204ENST00000444061 AFF2P51816 1311 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 CLSTN1O94985 981 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 A1BGP04217 495 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 JCADQ9P266 1359 aa16.94■□□□□ 0.3
SMARCA4-204ENST00000444061 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 TNS3Q68CZ2 1445 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 SEPT12Q8IYM1 358 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 MX1P20591 662 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 MEIS3Q99687 375 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 C22orf23Q9BZE7 217 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
SMARCA4-204ENST00000444061 CSPP1Q1MSJ5 1256 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms