RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 IL17REQ8NFR9 667 aa21.87■■□□□ 1.09
CTDSP1-204ENST00000443891 FCHSD2O94868 740 aa21.86■■□□□ 1.09
CTDSP1-204ENST00000443891 KCNA3P22001 575 aa21.86■■□□□ 1.09
CTDSP1-204ENST00000443891 WWC3Q9ULE0 1092 aa21.86■■□□□ 1.09
CTDSP1-204ENST00000443891 ZBTB1Q9Y2K1 713 aa21.86■■□□□ 1.09
CTDSP1-204ENST00000443891 CEMIPQ8WUJ3 1361 aa21.86■■□□□ 1.09
CTDSP1-204ENST00000443891 RSPH6AQ9H0K4 717 aa21.84■■□□□ 1.09
CTDSP1-204ENST00000443891 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
CTDSP1-204ENST00000443891 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
CTDSP1-204ENST00000443891 PRKAR2BP31323 418 aa21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 CNGB1Q14028 1251 aaPredicted RBP21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 DALRD3Q5D0E6 543 aaKnown RBP21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 ARHGAP27Q6ZUM4 889 aa21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 FMNL2Q96PY5 1086 aa21.83■■□□□ 1.09
CTDSP1-204ENST00000443891 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.08
CTDSP1-204ENST00000443891 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
CTDSP1-204ENST00000443891 PPP2R1AP30153 589 aa21.82■■□□□ 1.08
CTDSP1-204ENST00000443891 ZNF496Q96IT1 587 aaPredicted RBP21.82■■□□□ 1.08
CTDSP1-204ENST00000443891 HTATSF1O43719 755 aaKnown RBP21.81■■□□□ 1.08
CTDSP1-204ENST00000443891 NFIXQ14938 502 aa21.81■■□□□ 1.08
CTDSP1-204ENST00000443891 CANXP27824 592 aaKnown RBP21.8■■□□□ 1.08
CTDSP1-204ENST00000443891 PHACTR3Q96KR7 559 aa21.8■■□□□ 1.08
CTDSP1-204ENST00000443891 BRCA1P38398 1863 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 U2AF1L5P0DN76 240 aaPredicted RBP21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 IL6STP40189 918 aaPredicted RBP21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 U2AF1Q01081 240 aaKnown RBP eCLIP21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 RTF1Q92541 710 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 PDZRN3Q9UPQ7 1066 aa21.79■■□□□ 1.08
CTDSP1-204ENST00000443891 BTBD11A6QL63 1104 aa21.78■■□□□ 1.08
CTDSP1-204ENST00000443891 SERPINB2P05120 415 aa21.78■■□□□ 1.08
CTDSP1-204ENST00000443891 NPM2Q86SE8 214 aaKnown RBP21.78■■□□□ 1.08
CTDSP1-204ENST00000443891 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
CTDSP1-204ENST00000443891 ARFGEF1Q9Y6D6 1849 aa21.77■■□□□ 1.08
CTDSP1-204ENST00000443891 SIPA1L3O60292 1781 aaPredicted RBP21.76■■□□□ 1.07
CTDSP1-204ENST00000443891 NRXN2Q9P2S2 1712 aa21.75■■□□□ 1.07
CTDSP1-204ENST00000443891 KIF3CO14782 793 aa21.75■■□□□ 1.07
CTDSP1-204ENST00000443891 CHRNA5P30532 468 aa21.75■■□□□ 1.07
CTDSP1-204ENST00000443891 NEFMP07197 916 aa21.73■■□□□ 1.07
CTDSP1-204ENST00000443891 HSPA6P17066 643 aa21.73■■□□□ 1.07
CTDSP1-204ENST00000443891 C9orf131Q5VYM1 1079 aa21.73■■□□□ 1.07
CTDSP1-204ENST00000443891 ZC3H4Q9UPT8 1303 aaKnown RBP21.73■■□□□ 1.07
CTDSP1-204ENST00000443891 RGL2O15211 777 aa21.72■■□□□ 1.07
CTDSP1-204ENST00000443891 H0YIN7 160 aa21.71■■□□□ 1.07
CTDSP1-204ENST00000443891 TOMM70O94826 608 aa21.71■■□□□ 1.07
CTDSP1-204ENST00000443891 SNRPA1P09661 255 aaKnown RBP21.71■■□□□ 1.07
CTDSP1-204ENST00000443891 TTLL6Q8N841 843 aa21.71■■□□□ 1.07
CTDSP1-204ENST00000443891 A1BGP04217 495 aa21.7■■□□□ 1.06
CTDSP1-204ENST00000443891 PDE6BP35913 854 aa21.7■■□□□ 1.06
CTDSP1-204ENST00000443891 BRIP1Q9BX63 1249 aa21.7■■□□□ 1.06
CTDSP1-204ENST00000443891 PNNQ9H307 717 aaKnown RBP21.7■■□□□ 1.06
CTDSP1-204ENST00000443891 CARMIL3Q8ND23 1372 aa21.7■■□□□ 1.06
CTDSP1-204ENST00000443891 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
CTDSP1-204ENST00000443891 CLEC4GQ6UXB4 293 aa21.69■■□□□ 1.06
CTDSP1-204ENST00000443891 TBC1D2BQ9UPU7 963 aa21.69■■□□□ 1.06
CTDSP1-204ENST00000443891 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
CTDSP1-204ENST00000443891 AFDNP55196 1824 aaKnown RBP21.69■■□□□ 1.06
CTDSP1-204ENST00000443891 KCNQ3O43525 872 aa21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 MCM10Q7L590 875 aa21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 C2CD5Q86YS7 1000 aa21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 SETDB2Q96T68 719 aa21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 ZNF330Q9Y3S2 320 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-204ENST00000443891 CAMTA2O94983 1202 aa21.67■■□□□ 1.06
CTDSP1-204ENST00000443891 BICDL1Q6ZP65 573 aa21.67■■□□□ 1.06
CTDSP1-204ENST00000443891 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-204ENST00000443891 USP16Q9Y5T5 823 aa21.67■■□□□ 1.06
CTDSP1-204ENST00000443891 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
CTDSP1-204ENST00000443891 DZIP3Q86Y13 1208 aaKnown RBP21.66■■□□□ 1.06
CTDSP1-204ENST00000443891 ZNF652Q9Y2D9 606 aa21.66■■□□□ 1.06
CTDSP1-204ENST00000443891 PRR5LQ6MZQ0 368 aa21.65■■□□□ 1.06
CTDSP1-204ENST00000443891 DLEC1Q9Y238 1755 aa21.64■■□□□ 1.06
CTDSP1-204ENST00000443891 LMNB1P20700 586 aa21.64■■□□□ 1.05
CTDSP1-204ENST00000443891 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.05
CTDSP1-204ENST00000443891 APLP1P51693 650 aa21.63■■□□□ 1.05
CTDSP1-204ENST00000443891 ST5P78524 1137 aa21.63■■□□□ 1.05
CTDSP1-204ENST00000443891 CNBD1Q8NA66 436 aa21.63■■□□□ 1.05
CTDSP1-204ENST00000443891 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
CTDSP1-204ENST00000443891 C16orf71Q8IYS4 520 aaPredicted RBP21.62■■□□□ 1.05
CTDSP1-204ENST00000443891 PLEKHF1Q96S99 279 aa21.62■■□□□ 1.05
CTDSP1-204ENST00000443891 NPHP1O15259 732 aa21.61■■□□□ 1.05
CTDSP1-204ENST00000443891 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
CTDSP1-204ENST00000443891 CNKSR1Q969H4 720 aa21.61■■□□□ 1.05
CTDSP1-204ENST00000443891 FSTL1Q12841 308 aa21.6■■□□□ 1.05
CTDSP1-204ENST00000443891 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CTDSP1-204ENST00000443891 NFE2L2Q16236 605 aa21.6■■□□□ 1.05
CTDSP1-204ENST00000443891 STYK1Q6J9G0 422 aa21.6■■□□□ 1.05
CTDSP1-204ENST00000443891 ZNF622Q969S3 477 aaKnown RBP eCLIP21.6■■□□□ 1.05
CTDSP1-204ENST00000443891 SOGA3Q5TF21 947 aa21.59■■□□□ 1.05
CTDSP1-204ENST00000443891 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
CTDSP1-204ENST00000443891 PRAMEF22A3QJZ6 481 aa21.58■■□□□ 1.05
CTDSP1-204ENST00000443891 LTBP3Q9NS15 1303 aa21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 BCORQ6W2J9 1755 aa21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 RASSF7Q02833 373 aa21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 TPTE2Q6XPS3 522 aa21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 NBPF5PQ86XG9 351 aaPredicted RBP21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 MASTLQ96GX5 879 aa21.57■■□□□ 1.04
CTDSP1-204ENST00000443891 SBF1O95248 1867 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms