RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
SMPD4P1-203ENST00000443839 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
SMPD4P1-203ENST00000443839 RGS12O14924 1447 aa12.04□□□□□ -0.48
SMPD4P1-203ENST00000443839 CHMP4BQ9H444 224 aaKnown RBP12.04□□□□□ -0.48
SMPD4P1-203ENST00000443839 ITGB4P16144 1822 aa12.03□□□□□ -0.48
SMPD4P1-203ENST00000443839 PTCD1O75127 700 aaKnown RBP12.03□□□□□ -0.48
SMPD4P1-203ENST00000443839 PIGBQ92521 554 aa12.03□□□□□ -0.48
SMPD4P1-203ENST00000443839 C5P01031 1676 aa12.03□□□□□ -0.48
SMPD4P1-203ENST00000443839 SLC4A10Q6U841 1118 aa12.02□□□□□ -0.48
SMPD4P1-203ENST00000443839 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.48
SMPD4P1-203ENST00000443839 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.48
SMPD4P1-203ENST00000443839 PAPPAQ13219 1627 aa12.02□□□□□ -0.48
SMPD4P1-203ENST00000443839 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 F6X3S4 739 aa12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 ANXA1P04083 346 aa12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 INTS3Q68E01 1043 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 GJD4Q96KN9 370 aaPredicted RBP12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.49
SMPD4P1-203ENST00000443839 BCL9O00512 1426 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 HYPKQ9NX55 129 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 PROSER3Q2NL68 480 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 CENPQQ7L2Z9 268 aaPredicted RBP12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 ZBTB40Q9NUA8 1239 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
SMPD4P1-203ENST00000443839 ZBTB7BO15156 539 aaPredicted RBP12□□□□□ -0.49
SMPD4P1-203ENST00000443839 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
SMPD4P1-203ENST00000443839 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
SMPD4P1-203ENST00000443839 USP16Q9Y5T5 823 aa12□□□□□ -0.49
SMPD4P1-203ENST00000443839 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 MYL6BP14649 208 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 ACSBG1Q96GR2 724 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 ATRNO75882 1429 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 GLI3P10071 1580 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
SMPD4P1-203ENST00000443839 THSD7AQ9UPZ6 1657 aa11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 PI4KAP2A4QPH2 592 aa11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 PDIA6Q15084 440 aa11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 PI4KAP1Q8N8J0 262 aa11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 QTRT2Q9H974 415 aaKnown RBP11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
SMPD4P1-203ENST00000443839 EP400Q96L91 3159 aa11.97□□□□□ -0.49
SMPD4P1-203ENST00000443839 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
SMPD4P1-203ENST00000443839 VSIG10Q8N0Z9 540 aa11.97□□□□□ -0.49
SMPD4P1-203ENST00000443839 RWDD1Q9H446 243 aaPredicted RBP11.97□□□□□ -0.49
SMPD4P1-203ENST00000443839 IGHDP01880 384 aa11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 PIP4K2AP48426 406 aaPredicted RBP11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 TEX13AQ9BXU3 409 aaPredicted RBP11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 C1orf115Q9H7X2 142 aa11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
SMPD4P1-203ENST00000443839 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.5
SMPD4P1-203ENST00000443839 ADCY9O60503 1353 aa11.96□□□□□ -0.5
SMPD4P1-203ENST00000443839 STARD3NLO95772 234 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 MEIS3Q99687 375 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 SRCIN1Q9C0H9 1055 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 A1BGP04217 495 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 DNAJC10Q8IXB1 793 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 SEPT12Q8IYM1 358 aa11.95□□□□□ -0.5
SMPD4P1-203ENST00000443839 KCNQ2O43526 872 aa11.94□□□□□ -0.5
SMPD4P1-203ENST00000443839 HDAC1Q13547 482 aaPredicted RBP11.94□□□□□ -0.5
SMPD4P1-203ENST00000443839 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
SMPD4P1-203ENST00000443839 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 ZNF772Q68DY9 489 aaPredicted RBP11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 NBPF10Q6P3W6 841 aaKnown RBP11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 NBPF15Q8N660 670 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 ATP10DQ9P241 1426 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 GNAI3P08754 354 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 FAM182BQ5T319 152 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 BEND3Q5T5X7 828 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
SMPD4P1-203ENST00000443839 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 NEXNQ0ZGT2 675 aa11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 SLC4A9Q96Q91 983 aa11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 GNAI2P04899 355 aa11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 FBXO41Q8TF61 875 aa11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
SMPD4P1-203ENST00000443839 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
SMPD4P1-203ENST00000443839 UBTFL1P0CB47 393 aaPredicted RBP11.91□□□□□ -0.5
SMPD4P1-203ENST00000443839 SIK1P57059 783 aa11.91□□□□□ -0.5
SMPD4P1-203ENST00000443839 USP44Q9H0E7 712 aa11.91□□□□□ -0.5
SMPD4P1-203ENST00000443839 ALDH1L1O75891 902 aa11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 CYP19A1P11511 503 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 ATP6V1AP38606 617 aa11.9□□□□□ -0.5
SMPD4P1-203ENST00000443839 LINS1Q8NG48 757 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms