RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CCDC70Q6NSX1 233 aa26.45■■□□□ 1.82
CTDSPL-206ENST00000443503 PDIA4P13667 645 aaKnown RBP26.44■■□□□ 1.82
CTDSPL-206ENST00000443503 PIP4K2BP78356 416 aa26.44■■□□□ 1.82
CTDSPL-206ENST00000443503 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
CTDSPL-206ENST00000443503 EVI5LQ96CN4 794 aa26.44■■□□□ 1.82
CTDSPL-206ENST00000443503 GDPD2Q9HCC8 539 aa26.44■■□□□ 1.82
CTDSPL-206ENST00000443503 CDKL5O76039 1030 aa26.43■■□□□ 1.82
CTDSPL-206ENST00000443503 GPTP24298 496 aa26.43■■□□□ 1.82
CTDSPL-206ENST00000443503 ANO8Q9HCE9 1232 aaPredicted RBP26.43■■□□□ 1.82
CTDSPL-206ENST00000443503 SMC5Q8IY18 1101 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 TXLNAP40222 546 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 BRPF1P55201 1214 aaPredicted RBP26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 SLC39A6Q13433 755 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 EYA1Q99502 592 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 ABCC1P33527 1531 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 GPS2Q13227 327 aa26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 TRMT112Q9UI30 125 aaKnown RBP26.42■■□□□ 1.82
CTDSPL-206ENST00000443503 FLT4P35916 1363 aa26.41■■□□□ 1.82
CTDSPL-206ENST00000443503 CADPS2Q86UW7 1296 aa26.41■■□□□ 1.82
CTDSPL-206ENST00000443503 LRRC59Q96AG4 307 aaKnown RBP26.41■■□□□ 1.82
CTDSPL-206ENST00000443503 CAMK4Q16566 473 aa26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 ANKRD13DQ6ZTN6 518 aa26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 SERPINC1P01008 464 aa26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 SNRPA1P09661 255 aaKnown RBP26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 MAP3K11Q16584 847 aa26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 CCDC43Q96MW1 224 aaKnown RBP26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 MAP3K19Q56UN5 1328 aa26.4■■□□□ 1.82
CTDSPL-206ENST00000443503 BAG4O95429 457 aaKnown RBP26.39■■□□□ 1.82
CTDSPL-206ENST00000443503 ADAMTS2O95450 1211 aa26.39■■□□□ 1.82
CTDSPL-206ENST00000443503 ATP2B2Q01814 1243 aa26.39■■□□□ 1.82
CTDSPL-206ENST00000443503 SNRKQ9NRH2 765 aa26.39■■□□□ 1.82
CTDSPL-206ENST00000443503 SPATA31E1Q6ZUB1 1445 aa26.39■■□□□ 1.82
CTDSPL-206ENST00000443503 SEC24BO95487 1268 aa26.39■■□□□ 1.81
CTDSPL-206ENST00000443503 TTLL5Q6EMB2 1281 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 GOLIM4O00461 696 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 CEP57L1Q8IYX8 460 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 ATP8B2P98198 1209 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 DCTPP1Q9H773 170 aa26.38■■□□□ 1.81
CTDSPL-206ENST00000443503 HMGN5P82970 282 aaKnown RBP26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 FILIP1Q7Z7B0 1213 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 GUCY1B3Q02153 619 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 FILIP1LQ4L180 1135 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 COPS6Q7L5N1 327 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 KLHL34Q8N239 644 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 XAGE3Q8WTP9 111 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 SCAND2PQ9GZW5 306 aaPredicted RBP26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 ZMYM3Q14202 1370 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 ATP7AQ04656 1500 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 KCNA6P17658 529 aa26.37■■□□□ 1.81
CTDSPL-206ENST00000443503 NAP1L1P55209 391 aaKnown RBP26.36■■□□□ 1.81
CTDSPL-206ENST00000443503 ZFYVE9O95405 1425 aa26.36■■□□□ 1.81
CTDSPL-206ENST00000443503 CEP85Q6P2H3 762 aa26.36■■□□□ 1.81
CTDSPL-206ENST00000443503 CWC25Q9NXE8 425 aaPredicted RBP26.35■■□□□ 1.81
CTDSPL-206ENST00000443503 NAPBQ9H115 298 aa26.35■■□□□ 1.81
CTDSPL-206ENST00000443503 PIBF1Q8WXW3 757 aa26.35■■□□□ 1.81
CTDSPL-206ENST00000443503 TMX3Q96JJ7 454 aa26.35■■□□□ 1.81
CTDSPL-206ENST00000443503 TNNT3P45378 269 aaPredicted RBP26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 MINDY4BA8MYZ0 360 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 AKAP4Q5JQC9 854 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 LDHAL6AQ6ZMR3 332 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 ARGLU1Q9NWB6 273 aaPredicted RBP26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 OFD1O75665 1012 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 HSP90AB3PQ58FF7 597 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 CDK5RAP3Q96JB5 506 aa26.34■■□□□ 1.81
CTDSPL-206ENST00000443503 ZNF771Q7L3S4 317 aaPredicted RBP26.33■■□□□ 1.81
CTDSPL-206ENST00000443503 ZSCAN30Q86W11 494 aa26.33■■□□□ 1.81
CTDSPL-206ENST00000443503 CCT2P78371 535 aaKnown RBP26.33■■□□□ 1.81
CTDSPL-206ENST00000443503 TFIP11Q9UBB9 837 aaKnown RBP26.33■■□□□ 1.81
CTDSPL-206ENST00000443503 TRIM35Q9UPQ4 493 aa26.33■■□□□ 1.81
CTDSPL-206ENST00000443503 EXOC5O00471 708 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 ESYT1Q9BSJ8 1104 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 STX6O43752 255 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 PIP4K2AP48426 406 aaPredicted RBP26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 CCDC183Q5T5S1 534 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 ANKRD18BA2A2Z9 1011 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 GRM8O00222 908 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 HMGB1P09429 215 aaKnown RBP26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 KSR2Q6VAB6 950 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 ZNF652Q9Y2D9 606 aa26.32■■□□□ 1.8
CTDSPL-206ENST00000443503 PTPRTO14522 1441 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 CCDC82Q8N4S0 544 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 NOL7Q9UMY1 257 aaKnown RBP26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 RBM10P98175 930 aaKnown RBP26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 DDX46Q7L014 1031 aaKnown RBP26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 ZNF213O14771 459 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 GJB2P29033 226 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 C8orf76Q96K31 380 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 RNF123Q5XPI4 1314 aa26.31■■□□□ 1.8
CTDSPL-206ENST00000443503 ZBTB7BO15156 539 aaPredicted RBP26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 IL13P35225 146 aa26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 MAP3K12Q12852 859 aa26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 ALDH1L1O75891 902 aa26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 PA2G4Q9UQ80 394 aaKnown RBP26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 TCEANC2Q96MN5 208 aa26.3■■□□□ 1.8
CTDSPL-206ENST00000443503 CABLES1Q8TDN4 633 aa26.29■■□□□ 1.8
CTDSPL-206ENST00000443503 MBD5Q9P267 1494 aa26.29■■□□□ 1.8
CTDSPL-206ENST00000443503 CFAP65Q6ZU64 1925 aaKnown RBP26.29■■□□□ 1.8
CTDSPL-206ENST00000443503 PPFIA3O75145 1194 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms