RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 MCM10Q7L590 875 aa21.63■■□□□ 1.05
ATG4C-205ENST00000443289 ZNF784Q8NCA9 323 aaPredicted RBP21.63■■□□□ 1.05
ATG4C-205ENST00000443289 UBR2Q8IWV8 1755 aa21.63■■□□□ 1.05
ATG4C-205ENST00000443289 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
ATG4C-205ENST00000443289 USPL1Q5W0Q7 1092 aa21.62■■□□□ 1.05
ATG4C-205ENST00000443289 NARFQ9UHQ1 456 aa21.62■■□□□ 1.05
ATG4C-205ENST00000443289 C4AP0C0L4 1744 aa21.62■■□□□ 1.05
ATG4C-205ENST00000443289 COL15A1P39059 1388 aa21.61■■□□□ 1.05
ATG4C-205ENST00000443289 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
ATG4C-205ENST00000443289 A0A087WZG4 1122 aa21.6■■□□□ 1.05
ATG4C-205ENST00000443289 TM4SF1P30408 202 aa21.6■■□□□ 1.05
ATG4C-205ENST00000443289 PLEKHF1Q96S99 279 aa21.6■■□□□ 1.05
ATG4C-205ENST00000443289 C10orf71Q711Q0 1435 aa21.6■■□□□ 1.05
ATG4C-205ENST00000443289 KCNQ3O43525 872 aa21.59■■□□□ 1.05
ATG4C-205ENST00000443289 EIF5P55010 431 aaKnown RBP21.59■■□□□ 1.05
ATG4C-205ENST00000443289 DCTN1Q14203 1278 aa21.59■■□□□ 1.05
ATG4C-205ENST00000443289 DDR1Q08345 913 aa21.58■■□□□ 1.05
ATG4C-205ENST00000443289 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.05
ATG4C-205ENST00000443289 GOLGB1Q14789 3259 aaKnown RBP21.57■■□□□ 1.04
ATG4C-205ENST00000443289 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
ATG4C-205ENST00000443289 POLRMTO00411 1230 aaKnown RBP21.57■■□□□ 1.04
ATG4C-205ENST00000443289 NFE2L2Q16236 605 aa21.57■■□□□ 1.04
ATG4C-205ENST00000443289 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
ATG4C-205ENST00000443289 PXDNLA1KZ92 1463 aa21.57■■□□□ 1.04
ATG4C-205ENST00000443289 MYBBP1AQ9BQG0 1328 aaKnown RBP21.56■■□□□ 1.04
ATG4C-205ENST00000443289 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
ATG4C-205ENST00000443289 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
ATG4C-205ENST00000443289 NPM2Q86SE8 214 aaKnown RBP21.56■■□□□ 1.04
ATG4C-205ENST00000443289 PRKRIP1Q9H875 184 aaPredicted RBP21.56■■□□□ 1.04
ATG4C-205ENST00000443289 KIF13BQ9NQT8 1826 aa21.56■■□□□ 1.04
ATG4C-205ENST00000443289 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
ATG4C-205ENST00000443289 A1BGP04217 495 aa21.54■■□□□ 1.04
ATG4C-205ENST00000443289 DPEP1P16444 411 aa21.54■■□□□ 1.04
ATG4C-205ENST00000443289 NFIXQ14938 502 aa21.54■■□□□ 1.04
ATG4C-205ENST00000443289 PNISRQ8TF01 805 aaKnown RBP21.54■■□□□ 1.04
ATG4C-205ENST00000443289 BCL2L12Q9HB09 334 aa21.54■■□□□ 1.04
ATG4C-205ENST00000443289 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
ATG4C-205ENST00000443289 ZNF330Q9Y3S2 320 aaPredicted RBP21.53■■□□□ 1.04
ATG4C-205ENST00000443289 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
ATG4C-205ENST00000443289 SERPINB2P05120 415 aa21.5■■□□□ 1.03
ATG4C-205ENST00000443289 KCNA3P22001 575 aa21.5■■□□□ 1.03
ATG4C-205ENST00000443289 PIM2Q9P1W9 311 aa21.5■■□□□ 1.03
ATG4C-205ENST00000443289 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
ATG4C-205ENST00000443289 PRAMEF22A3QJZ6 481 aa21.49■■□□□ 1.03
ATG4C-205ENST00000443289 MIS18AQ9NYP9 233 aa21.49■■□□□ 1.03
ATG4C-205ENST00000443289 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
ATG4C-205ENST00000443289 N4BP2Q86UW6 1770 aaPredicted RBP21.48■■□□□ 1.03
ATG4C-205ENST00000443289 ANP32CO43423 234 aa21.48■■□□□ 1.03
ATG4C-205ENST00000443289 RIPK4P57078 832 aa21.47■■□□□ 1.03
ATG4C-205ENST00000443289 BICDL1Q6ZP65 573 aa21.47■■□□□ 1.03
ATG4C-205ENST00000443289 DZIP3Q86Y13 1208 aaKnown RBP21.47■■□□□ 1.03
ATG4C-205ENST00000443289 CAMTA2O94983 1202 aa21.46■■□□□ 1.03
ATG4C-205ENST00000443289 TBC1D9BQ66K14 1250 aa21.46■■□□□ 1.03
ATG4C-205ENST00000443289 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
ATG4C-205ENST00000443289 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
ATG4C-205ENST00000443289 CHRNA5P30532 468 aa21.45■■□□□ 1.02
ATG4C-205ENST00000443289 LMOD3Q0VAK6 560 aa21.45■■□□□ 1.02
ATG4C-205ENST00000443289 WDR43Q15061 677 aaKnown RBP eCLIP21.45■■□□□ 1.02
ATG4C-205ENST00000443289 DALRD3Q5D0E6 543 aaKnown RBP21.45■■□□□ 1.02
ATG4C-205ENST00000443289 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
ATG4C-205ENST00000443289 TMPOP42166 694 aaKnown RBP21.44■■□□□ 1.02
ATG4C-205ENST00000443289 PIP4K2AP48426 406 aaPredicted RBP21.44■■□□□ 1.02
ATG4C-205ENST00000443289 EIF4A1P60842 406 aaKnown RBP21.44■■□□□ 1.02
ATG4C-205ENST00000443289 CLEC4GQ6UXB4 293 aa21.44■■□□□ 1.02
ATG4C-205ENST00000443289 SETDB2Q96T68 719 aa21.44■■□□□ 1.02
ATG4C-205ENST00000443289 GIGYF1O75420 1035 aaPredicted RBP21.43■■□□□ 1.02
ATG4C-205ENST00000443289 NBPF26B4DH59 902 aa21.42■■□□□ 1.02
ATG4C-205ENST00000443289 NBPF10Q6P3W6 841 aaKnown RBP21.42■■□□□ 1.02
ATG4C-205ENST00000443289 NBPF15Q8N660 670 aa21.42■■□□□ 1.02
ATG4C-205ENST00000443289 CARMIL3Q8ND23 1372 aa21.42■■□□□ 1.02
ATG4C-205ENST00000443289 ATP10DQ9P241 1426 aa21.42■■□□□ 1.02
ATG4C-205ENST00000443289 NRXN2Q9P2S2 1712 aa21.42■■□□□ 1.02
ATG4C-205ENST00000443289 ADCY9O60503 1353 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 RGL2O15211 777 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 RUNDC1Q96C34 613 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 PDZRN3Q9UPQ7 1066 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
ATG4C-205ENST00000443289 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
ATG4C-205ENST00000443289 CCDC184Q52MB2 194 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 BRIP1Q9BX63 1249 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 TSPYL4Q9UJ04 414 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 ADAMTS8Q9UP79 889 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
ATG4C-205ENST00000443289 BRCA1P38398 1863 aaKnown RBP21.39■■□□□ 1.02
ATG4C-205ENST00000443289 H0YIN7 160 aa21.39■■□□□ 1.01
ATG4C-205ENST00000443289 PRR5LQ6MZQ0 368 aa21.39■■□□□ 1.01
ATG4C-205ENST00000443289 C2CD5Q86YS7 1000 aa21.39■■□□□ 1.01
ATG4C-205ENST00000443289 PDE6BP35913 854 aa21.38■■□□□ 1.01
ATG4C-205ENST00000443289 GPBP1L1Q9HC44 474 aaPredicted RBP21.38■■□□□ 1.01
ATG4C-205ENST00000443289 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
ATG4C-205ENST00000443289 NPHP1O15259 732 aa21.37■■□□□ 1.01
ATG4C-205ENST00000443289 C1QTNF8P60827 252 aa21.37■■□□□ 1.01
ATG4C-205ENST00000443289 NEUROD2Q15784 382 aa21.37■■□□□ 1.01
ATG4C-205ENST00000443289 TTLL6Q8N841 843 aa21.37■■□□□ 1.01
ATG4C-205ENST00000443289 CNBD1Q8NA66 436 aa21.37■■□□□ 1.01
ATG4C-205ENST00000443289 RRP7AQ9Y3A4 280 aaKnown RBP21.37■■□□□ 1.01
ATG4C-205ENST00000443289 ST5P78524 1137 aa21.36■■□□□ 1.01
ATG4C-205ENST00000443289 ARFGEF1Q9Y6D6 1849 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms