RNA–Protein interactions for RNA: ENST00000443218.1

ODC1-203, Transcript of ornithine decarboxylase 1, humanhuman

TSL 2

Gene ODC1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ODC1-203ENST00000443218 MRC1P22897 1456 aa22.4■■□□□ 1.18
ODC1-203ENST00000443218 CYP19A1P11511 503 aaPredicted RBP22.39■■□□□ 1.17
ODC1-203ENST00000443218 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
ODC1-203ENST00000443218 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
ODC1-203ENST00000443218 NFIXQ14938 502 aa22.39■■□□□ 1.17
ODC1-203ENST00000443218 SLC52A2Q9HAB3 445 aa22.39■■□□□ 1.17
ODC1-203ENST00000443218 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
ODC1-203ENST00000443218 DLEC1Q9Y238 1755 aa22.39■■□□□ 1.17
ODC1-203ENST00000443218 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
ODC1-203ENST00000443218 AKAP4Q5JQC9 854 aa22.37■■□□□ 1.17
ODC1-203ENST00000443218 ZPR1O75312 459 aa22.36■■□□□ 1.17
ODC1-203ENST00000443218 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
ODC1-203ENST00000443218 ZBTB1Q9Y2K1 713 aa22.36■■□□□ 1.17
ODC1-203ENST00000443218 COL15A1P39059 1388 aa22.35■■□□□ 1.17
ODC1-203ENST00000443218 CARMIL3Q8ND23 1372 aa22.35■■□□□ 1.17
ODC1-203ENST00000443218 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
ODC1-203ENST00000443218 CCDC88AQ3V6T2 1871 aa22.33■■□□□ 1.17
ODC1-203ENST00000443218 EIF4G2P78344 907 aaKnown RBP eCLIP22.33■■□□□ 1.17
ODC1-203ENST00000443218 SMC1BQ8NDV3 1235 aa22.33■■□□□ 1.17
ODC1-203ENST00000443218 TIAM2Q8IVF5 1701 aa22.32■■□□□ 1.16
ODC1-203ENST00000443218 SERPINB2P05120 415 aa22.32■■□□□ 1.16
ODC1-203ENST00000443218 UBR2Q8IWV8 1755 aa22.32■■□□□ 1.16
ODC1-203ENST00000443218 ZC3H4Q9UPT8 1303 aaKnown RBP22.31■■□□□ 1.16
ODC1-203ENST00000443218 GLTPD2A6NH11 291 aa22.31■■□□□ 1.16
ODC1-203ENST00000443218 NFKBIEO00221 500 aa22.31■■□□□ 1.16
ODC1-203ENST00000443218 LMNB1P20700 586 aa22.31■■□□□ 1.16
ODC1-203ENST00000443218 POTECB2RU33 542 aa22.3■■□□□ 1.16
ODC1-203ENST00000443218 HMOX1P09601 288 aa22.3■■□□□ 1.16
ODC1-203ENST00000443218 MTHFSDQ2M296 383 aaKnown RBP22.3■■□□□ 1.16
ODC1-203ENST00000443218 AMER1Q5JTC6 1135 aaPredicted RBP22.3■■□□□ 1.16
ODC1-203ENST00000443218 ANKRD31Q8N7Z5 1873 aa22.3■■□□□ 1.16
ODC1-203ENST00000443218 TTLL6Q8N841 843 aa22.29■■□□□ 1.16
ODC1-203ENST00000443218 PCNTO95613 3336 aa22.28■■□□□ 1.16
ODC1-203ENST00000443218 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
ODC1-203ENST00000443218 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
ODC1-203ENST00000443218 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
ODC1-203ENST00000443218 CANXP27824 592 aaKnown RBP22.26■■□□□ 1.15
ODC1-203ENST00000443218 VSIG10Q8N0Z9 540 aa22.26■■□□□ 1.15
ODC1-203ENST00000443218 KNSTRNQ9Y448 316 aa22.26■■□□□ 1.15
ODC1-203ENST00000443218 COL11A2P13942 1736 aaPredicted RBP22.26■■□□□ 1.15
ODC1-203ENST00000443218 EIF5P55010 431 aaKnown RBP22.25■■□□□ 1.15
ODC1-203ENST00000443218 BICDL1Q6ZP65 573 aa22.25■■□□□ 1.15
ODC1-203ENST00000443218 CAPN15O75808 1086 aa22.24■■□□□ 1.15
ODC1-203ENST00000443218 H0YIN7 160 aa22.23■■□□□ 1.15
ODC1-203ENST00000443218 TBC1D9BQ66K14 1250 aa22.23■■□□□ 1.15
ODC1-203ENST00000443218 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
ODC1-203ENST00000443218 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
ODC1-203ENST00000443218 FER1L6Q2WGJ9 1857 aa22.22■■□□□ 1.15
ODC1-203ENST00000443218 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
ODC1-203ENST00000443218 CCDC24Q8N4L8 307 aa22.22■■□□□ 1.15
ODC1-203ENST00000443218 HSPA1AP0DMV8 641 aaKnown RBP22.21■■□□□ 1.15
ODC1-203ENST00000443218 HSPA1BP0DMV9 641 aaKnown RBP22.21■■□□□ 1.15
ODC1-203ENST00000443218 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
ODC1-203ENST00000443218 ZNF496Q96IT1 587 aaPredicted RBP22.2■■□□□ 1.14
ODC1-203ENST00000443218 SIPA1L3O60292 1781 aaPredicted RBP22.2■■□□□ 1.14
ODC1-203ENST00000443218 C21orf2O43822 256 aa22.19■■□□□ 1.14
ODC1-203ENST00000443218 PRR5LQ6MZQ0 368 aa22.19■■□□□ 1.14
ODC1-203ENST00000443218 ZNF219Q9P2Y4 722 aaPredicted RBP22.19■■□□□ 1.14
ODC1-203ENST00000443218 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
ODC1-203ENST00000443218 IL17REQ8NFR9 667 aa22.18■■□□□ 1.14
ODC1-203ENST00000443218 ZNF622Q969S3 477 aaKnown RBP eCLIP22.18■■□□□ 1.14
ODC1-203ENST00000443218 BRIP1Q9BX63 1249 aa22.18■■□□□ 1.14
ODC1-203ENST00000443218 TBC1D2BQ9UPU7 963 aa22.18■■□□□ 1.14
ODC1-203ENST00000443218 COL3A1P02461 1466 aaPredicted RBP22.17■■□□□ 1.14
ODC1-203ENST00000443218 HEG1Q9ULI3 1381 aa22.17■■□□□ 1.14
ODC1-203ENST00000443218 DIAPH1O60610 1272 aaKnown RBP22.17■■□□□ 1.14
ODC1-203ENST00000443218 STARD3NLO95772 234 aa22.17■■□□□ 1.14
ODC1-203ENST00000443218 SLX4Q8IY92 1834 aa22.17■■□□□ 1.14
ODC1-203ENST00000443218 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
ODC1-203ENST00000443218 POTEIP0CG38 1075 aa22.16■■□□□ 1.14
ODC1-203ENST00000443218 POTEJP0CG39 1038 aa22.16■■□□□ 1.14
ODC1-203ENST00000443218 A0A087WZG4 1122 aa22.15■■□□□ 1.14
ODC1-203ENST00000443218 ERFEQ4G0M1 354 aa22.15■■□□□ 1.14
ODC1-203ENST00000443218 ZNF790Q6PG37 636 aa22.15■■□□□ 1.14
ODC1-203ENST00000443218 TTC5Q8N0Z6 440 aa22.15■■□□□ 1.14
ODC1-203ENST00000443218 CACNA1SQ13698 1873 aa22.14■■□□□ 1.13
ODC1-203ENST00000443218 PDE6BP35913 854 aa22.14■■□□□ 1.13
ODC1-203ENST00000443218 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
ODC1-203ENST00000443218 CAMTA2O94983 1202 aa22.13■■□□□ 1.13
ODC1-203ENST00000443218 A1BGP04217 495 aa22.13■■□□□ 1.13
ODC1-203ENST00000443218 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
ODC1-203ENST00000443218 DPY19L2Q6NUT2 758 aa22.13■■□□□ 1.13
ODC1-203ENST00000443218 ZNF330Q9Y3S2 320 aaPredicted RBP22.13■■□□□ 1.13
ODC1-203ENST00000443218 BCORQ6W2J9 1755 aa22.12■■□□□ 1.13
ODC1-203ENST00000443218 KCNQ3O43525 872 aa22.12■■□□□ 1.13
ODC1-203ENST00000443218 DDNO94850 711 aaPredicted RBP22.12■■□□□ 1.13
ODC1-203ENST00000443218 IL6STP40189 918 aaPredicted RBP22.12■■□□□ 1.13
ODC1-203ENST00000443218 ARFGEF2Q9Y6D5 1785 aa22.12■■□□□ 1.13
ODC1-203ENST00000443218 PDZRN3Q9UPQ7 1066 aa22.11■■□□□ 1.13
ODC1-203ENST00000443218 SRGNP10124 158 aa22.1■■□□□ 1.13
ODC1-203ENST00000443218 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
ODC1-203ENST00000443218 TAOK3Q9H2K8 898 aa22.1■■□□□ 1.13
ODC1-203ENST00000443218 GNAT3A8MTJ3 354 aa22.09■■□□□ 1.13
ODC1-203ENST00000443218 TEFQ10587 303 aa22.09■■□□□ 1.13
ODC1-203ENST00000443218 PRPF40BQ6NWY9 871 aaKnown RBP22.09■■□□□ 1.13
ODC1-203ENST00000443218 TEX13AQ9BXU3 409 aaPredicted RBP22.09■■□□□ 1.13
ODC1-203ENST00000443218 MKRN1Q9UHC7 482 aaKnown RBP22.09■■□□□ 1.13
ODC1-203ENST00000443218 CEMIPQ8WUJ3 1361 aa22.09■■□□□ 1.13
ODC1-203ENST00000443218 PIP4K2AP48426 406 aaPredicted RBP22.08■■□□□ 1.13
ODC1-203ENST00000443218 STYK1Q6J9G0 422 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms