RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 RABEP1Q15276 862 aa18.33■□□□□ 0.53
CHFR-204ENST00000443047 CYP2E1P05181 493 aaPredicted RBP18.33■□□□□ 0.52
CHFR-204ENST00000443047 MEIS3Q99687 375 aa18.33■□□□□ 0.52
CHFR-204ENST00000443047 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.52
CHFR-204ENST00000443047 CRB1P82279 1406 aa18.33■□□□□ 0.52
CHFR-204ENST00000443047 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
CHFR-204ENST00000443047 PIK3C2AO00443 1686 aa18.32■□□□□ 0.52
CHFR-204ENST00000443047 RIOK3O14730 519 aaKnown RBP18.32■□□□□ 0.52
CHFR-204ENST00000443047 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
CHFR-204ENST00000443047 CDC45O75419 566 aa18.31■□□□□ 0.52
CHFR-204ENST00000443047 GTF2F1P35269 517 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHFR-204ENST00000443047 ESCO1Q5FWF5 840 aa18.31■□□□□ 0.52
CHFR-204ENST00000443047 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
CHFR-204ENST00000443047 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
CHFR-204ENST00000443047 MSH6P52701 1360 aa18.31■□□□□ 0.52
CHFR-204ENST00000443047 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
CHFR-204ENST00000443047 IGSF1Q8N6C5 1336 aa18.31■□□□□ 0.52
CHFR-204ENST00000443047 RGS12O14924 1447 aa18.31■□□□□ 0.52
CHFR-204ENST00000443047 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
CHFR-204ENST00000443047 ADCY5O95622 1261 aa18.3■□□□□ 0.52
CHFR-204ENST00000443047 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
CHFR-204ENST00000443047 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
CHFR-204ENST00000443047 CHMP4AQ9BY43 222 aa18.3■□□□□ 0.52
CHFR-204ENST00000443047 TAF3Q5VWG9 929 aa18.29■□□□□ 0.52
CHFR-204ENST00000443047 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
CHFR-204ENST00000443047 RGPD1P0DJD0 1748 aa18.29■□□□□ 0.52
CHFR-204ENST00000443047 LMOD2Q6P5Q4 547 aa18.29■□□□□ 0.52
CHFR-204ENST00000443047 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
CHFR-204ENST00000443047 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
CHFR-204ENST00000443047 ST18O60284 1047 aa18.28■□□□□ 0.52
CHFR-204ENST00000443047 MBD3O95983 291 aa18.28■□□□□ 0.52
CHFR-204ENST00000443047 IL17REQ8NFR9 667 aa18.27■□□□□ 0.52
CHFR-204ENST00000443047 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
CHFR-204ENST00000443047 PAXIP1Q6ZW49 1069 aaPredicted RBP18.27■□□□□ 0.52
CHFR-204ENST00000443047 ORAI2Q96SN7 254 aa18.27■□□□□ 0.51
CHFR-204ENST00000443047 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
CHFR-204ENST00000443047 SPC24Q8NBT2 197 aa18.26■□□□□ 0.51
CHFR-204ENST00000443047 KDRP35968 1356 aa18.26■□□□□ 0.51
CHFR-204ENST00000443047 IRX5P78411 483 aaPredicted RBP18.26■□□□□ 0.51
CHFR-204ENST00000443047 PSME1Q06323 249 aa18.26■□□□□ 0.51
CHFR-204ENST00000443047 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
CHFR-204ENST00000443047 LRRC59Q96AG4 307 aaKnown RBP18.26■□□□□ 0.51
CHFR-204ENST00000443047 DIAPH3Q9NSV4 1193 aa18.26■□□□□ 0.51
CHFR-204ENST00000443047 GNAT3A8MTJ3 354 aa18.25■□□□□ 0.51
CHFR-204ENST00000443047 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
CHFR-204ENST00000443047 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
CHFR-204ENST00000443047 FMN2Q9NZ56 1722 aa18.25■□□□□ 0.51
CHFR-204ENST00000443047 KIAA0232Q92628 1395 aa18.25■□□□□ 0.51
CHFR-204ENST00000443047 ERICH4A6NGS2 130 aa18.25■□□□□ 0.51
CHFR-204ENST00000443047 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
CHFR-204ENST00000443047 HCLS1P14317 486 aaPredicted RBP18.24■□□□□ 0.51
CHFR-204ENST00000443047 SYAP1Q96A49 352 aaPredicted RBP18.24■□□□□ 0.51
CHFR-204ENST00000443047 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
CHFR-204ENST00000443047 PLEKHM2Q8IWE5 1019 aa18.24■□□□□ 0.51
CHFR-204ENST00000443047 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
CHFR-204ENST00000443047 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
CHFR-204ENST00000443047 DCTPP1Q9H773 170 aa18.24■□□□□ 0.51
CHFR-204ENST00000443047 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
CHFR-204ENST00000443047 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
CHFR-204ENST00000443047 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
CHFR-204ENST00000443047 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
CHFR-204ENST00000443047 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
CHFR-204ENST00000443047 NAA30Q147X3 362 aaPredicted RBP18.22■□□□□ 0.51
CHFR-204ENST00000443047 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
CHFR-204ENST00000443047 ANKARQ7Z5J8 1434 aa18.21■□□□□ 0.51
CHFR-204ENST00000443047 TSHZ3Q63HK5 1081 aa18.21■□□□□ 0.5
CHFR-204ENST00000443047 PTPRCP08575 1304 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
CHFR-204ENST00000443047 NEK4P51957 841 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 TAF7LQ5H9L4 462 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 CERS3Q8IU89 383 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 ANKRD7Q92527 254 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 FEZ1Q99689 392 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 STK31Q9BXU1 1019 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 FLIIQ13045 1269 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 SPTLC3Q9NUV7 552 aa18.2■□□□□ 0.5
CHFR-204ENST00000443047 KCNQ3O43525 872 aa18.19■□□□□ 0.5
CHFR-204ENST00000443047 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
CHFR-204ENST00000443047 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
CHFR-204ENST00000443047 PHF14O94880 888 aa18.19■□□□□ 0.5
CHFR-204ENST00000443047 PHAXQ9H814 394 aaKnown RBP18.19■□□□□ 0.5
CHFR-204ENST00000443047 MARF1Q9Y4F3 1742 aaKnown RBP18.19■□□□□ 0.5
CHFR-204ENST00000443047 ANXA1P04083 346 aa18.18■□□□□ 0.5
CHFR-204ENST00000443047 NWD1Q149M9 1564 aa18.18■□□□□ 0.5
CHFR-204ENST00000443047 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
CHFR-204ENST00000443047 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
CHFR-204ENST00000443047 SLFN14P0C7P3 912 aa18.17■□□□□ 0.5
CHFR-204ENST00000443047 NCBP1Q09161 790 aaKnown RBP18.17■□□□□ 0.5
CHFR-204ENST00000443047 TAF7Q15545 349 aaPredicted RBP18.17■□□□□ 0.5
CHFR-204ENST00000443047 RPAP2Q8IXW5 612 aaPredicted RBP18.17■□□□□ 0.5
CHFR-204ENST00000443047 KIAA1524Q8TCG1 905 aa18.17■□□□□ 0.5
CHFR-204ENST00000443047 TMX3Q96JJ7 454 aa18.17■□□□□ 0.5
CHFR-204ENST00000443047 MPRIPQ6WCQ1 1025 aa18.16■□□□□ 0.5
CHFR-204ENST00000443047 IP6K1Q92551 441 aa18.16■□□□□ 0.5
CHFR-204ENST00000443047 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
CHFR-204ENST00000443047 C16orf45Q96MC5 204 aaPredicted RBP18.16■□□□□ 0.5
CHFR-204ENST00000443047 PNMA6EA0A0J9YXQ4 647 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 TTC22Q5TAA0 569 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
CHFR-204ENST00000443047 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms