RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 CANXP27824 592 aaKnown RBP13.69□□□□□ -0.22
HDLBP-219ENST00000442714 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
HDLBP-219ENST00000442714 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-219ENST00000442714 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-219ENST00000442714 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-219ENST00000442714 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
HDLBP-219ENST00000442714 NMRK2Q9NPI5 230 aa13.68□□□□□ -0.22
HDLBP-219ENST00000442714 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
HDLBP-219ENST00000442714 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
HDLBP-219ENST00000442714 A0A087WZG4 1122 aa13.66□□□□□ -0.22
HDLBP-219ENST00000442714 TEFQ10587 303 aa13.66□□□□□ -0.22
HDLBP-219ENST00000442714 KCNQ3O43525 872 aa13.65□□□□□ -0.22
HDLBP-219ENST00000442714 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 MRC1P22897 1456 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 COL15A1P39059 1388 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 A1BGP04217 495 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 APLP1P51693 650 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 RBM46Q8TBY0 533 aaKnown RBP13.64□□□□□ -0.23
HDLBP-219ENST00000442714 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 RNF181Q9P0P0 153 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 KIF13BQ9NQT8 1826 aa13.64□□□□□ -0.23
HDLBP-219ENST00000442714 COL5A3P25940 1745 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-219ENST00000442714 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 H0YIN7 160 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 PRKAR2BP31323 418 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-219ENST00000442714 PRELPP51888 382 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 IFFO2Q5TF58 517 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 TBC1D9BQ66K14 1250 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 C2CD5Q86YS7 1000 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 RRAGCQ9HB90 399 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 KCPQ6ZWJ8 1503 aa13.63□□□□□ -0.23
HDLBP-219ENST00000442714 KIAA1551Q9HCM1 1747 aa13.62□□□□□ -0.23
HDLBP-219ENST00000442714 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
HDLBP-219ENST00000442714 CFAP53Q96M91 514 aa13.62□□□□□ -0.23
HDLBP-219ENST00000442714 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-219ENST00000442714 PPP2R1AP30153 589 aa13.61□□□□□ -0.23
HDLBP-219ENST00000442714 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
HDLBP-219ENST00000442714 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
HDLBP-219ENST00000442714 N4BP2Q86UW6 1770 aaPredicted RBP13.6□□□□□ -0.23
HDLBP-219ENST00000442714 CAMTA2O94983 1202 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 LMNB1P20700 586 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 PDE6BP35913 854 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 FSTL1Q12841 308 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
HDLBP-219ENST00000442714 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
HDLBP-219ENST00000442714 U2AF1L5P0DN76 240 aaPredicted RBP13.59□□□□□ -0.23
HDLBP-219ENST00000442714 U2AF1Q01081 240 aaKnown RBP eCLIP13.59□□□□□ -0.23
HDLBP-219ENST00000442714 RASSF7Q02833 373 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 TJP1Q07157 1748 aa13.59□□□□□ -0.23
HDLBP-219ENST00000442714 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
HDLBP-219ENST00000442714 NFKBIEO00221 500 aa13.58□□□□□ -0.24
HDLBP-219ENST00000442714 SNRPA1P09661 255 aaKnown RBP13.58□□□□□ -0.24
HDLBP-219ENST00000442714 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.24
HDLBP-219ENST00000442714 MCM10Q7L590 875 aa13.58□□□□□ -0.24
HDLBP-219ENST00000442714 C16orf71Q8IYS4 520 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-219ENST00000442714 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
HDLBP-219ENST00000442714 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.242e-8■□□□□ 8.2
HDLBP-219ENST00000442714 ZNF330Q9Y3S2 320 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-219ENST00000442714 ZC3H4Q9UPT8 1303 aaKnown RBP13.58□□□□□ -0.24
HDLBP-219ENST00000442714 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
HDLBP-219ENST00000442714 CARMIL3Q8ND23 1372 aa13.57□□□□□ -0.24
HDLBP-219ENST00000442714 POTECB2RU33 542 aa13.56□□□□□ -0.24
HDLBP-219ENST00000442714 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
HDLBP-219ENST00000442714 C21orf2O43822 256 aa13.56□□□□□ -0.24
HDLBP-219ENST00000442714 VEGFAP15692 232 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-219ENST00000442714 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
HDLBP-219ENST00000442714 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-219ENST00000442714 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
HDLBP-219ENST00000442714 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
HDLBP-219ENST00000442714 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
HDLBP-219ENST00000442714 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
HDLBP-219ENST00000442714 KLRG2A4D1S0 409 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-219ENST00000442714 SRGNP10124 158 aa13.55□□□□□ -0.24
HDLBP-219ENST00000442714 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-219ENST00000442714 HTRA3P83110 453 aa13.55□□□□□ -0.24
HDLBP-219ENST00000442714 C7orf43Q8WVR3 580 aa13.55□□□□□ -0.24
HDLBP-219ENST00000442714 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
HDLBP-219ENST00000442714 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
HDLBP-219ENST00000442714 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
HDLBP-219ENST00000442714 MIS18AQ9NYP9 233 aa13.54□□□□□ -0.24
HDLBP-219ENST00000442714 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-219ENST00000442714 RGL2O15211 777 aa13.53□□□□□ -0.24
HDLBP-219ENST00000442714 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
HDLBP-219ENST00000442714 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
HDLBP-219ENST00000442714 SMC1BQ8NDV3 1235 aa13.53□□□□□ -0.24
HDLBP-219ENST00000442714 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
HDLBP-219ENST00000442714 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms