RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CUL4AQ13619 759 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 CSPP1Q1MSJ5 1256 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 CNPY2Q9Y2B0 182 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
MCF2L-218ENST00000442625 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
MCF2L-218ENST00000442625 USP6P35125 1406 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-218ENST00000442625 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 EYA1Q99502 592 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 TECPR2O15040 1411 aa17.06■□□□□ 0.32
MCF2L-218ENST00000442625 CPA1P15085 419 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 AMPHP49418 695 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 NUTM2GQ5VZR2 741 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 CNPY4Q8N129 248 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
MCF2L-218ENST00000442625 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
MCF2L-218ENST00000442625 MCM5P33992 734 aa17.04■□□□□ 0.32
MCF2L-218ENST00000442625 ADCY5O95622 1261 aa17.03■□□□□ 0.32
MCF2L-218ENST00000442625 MCCP23508 829 aa17.03■□□□□ 0.32
MCF2L-218ENST00000442625 HDGFP51858 240 aaKnown RBP17.03■□□□□ 0.32
MCF2L-218ENST00000442625 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
MCF2L-218ENST00000442625 AGLP35573 1532 aa17.02■□□□□ 0.32
MCF2L-218ENST00000442625 LTKP29376 864 aa17.02■□□□□ 0.32
MCF2L-218ENST00000442625 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
MCF2L-218ENST00000442625 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-218ENST00000442625 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
MCF2L-218ENST00000442625 FIBPO43427 364 aa17.02■□□□□ 0.31
MCF2L-218ENST00000442625 GNAI3P08754 354 aa17.02■□□□□ 0.31
MCF2L-218ENST00000442625 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.31
MCF2L-218ENST00000442625 CEP170BQ9Y4F5 1589 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-218ENST00000442625 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
MCF2L-218ENST00000442625 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-218ENST00000442625 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
MCF2L-218ENST00000442625 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
MCF2L-218ENST00000442625 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
MCF2L-218ENST00000442625 ZNF710Q8N1W2 664 aa17.01■□□□□ 0.31
MCF2L-218ENST00000442625 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
MCF2L-218ENST00000442625 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
MCF2L-218ENST00000442625 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
MCF2L-218ENST00000442625 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
MCF2L-218ENST00000442625 MCM2P49736 904 aa17■□□□□ 0.31
MCF2L-218ENST00000442625 USP44Q9H0E7 712 aa17■□□□□ 0.31
MCF2L-218ENST00000442625 PHAXQ9H814 394 aaKnown RBP17■□□□□ 0.31
MCF2L-218ENST00000442625 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
MCF2L-218ENST00000442625 FLT4P35916 1363 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 RPAP1Q9BWH6 1393 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-218ENST00000442625 RGPD1P0DJD0 1748 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 AP5Z1O43299 807 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 TNRQ92752 1358 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 RASEFQ8IZ41 740 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
MCF2L-218ENST00000442625 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
MCF2L-218ENST00000442625 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 LARGE1O95461 756 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 UBTFL1P0CB47 393 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-218ENST00000442625 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 IL17REQ8NFR9 667 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 MYRIPQ8NFW9 859 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-218ENST00000442625 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
MCF2L-218ENST00000442625 CBX1P83916 185 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
MCF2L-218ENST00000442625 SBNO1A3KN83 1393 aa16.97■□□□□ 0.31
MCF2L-218ENST00000442625 SURF6O75683 361 aaKnown RBP16.97■□□□□ 0.31
MCF2L-218ENST00000442625 AK2P54819 239 aa16.97■□□□□ 0.31
MCF2L-218ENST00000442625 NLRP6P59044 892 aa16.97■□□□□ 0.31
MCF2L-218ENST00000442625 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
MCF2L-218ENST00000442625 STAP2Q9UGK3 403 aa16.97■□□□□ 0.31
MCF2L-218ENST00000442625 KDRP35968 1356 aa16.96■□□□□ 0.31
MCF2L-218ENST00000442625 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
MCF2L-218ENST00000442625 SYT1P21579 422 aa16.96■□□□□ 0.31
MCF2L-218ENST00000442625 ANAPC15P60006 121 aa16.96■□□□□ 0.31
MCF2L-218ENST00000442625 PPP1R42Q7Z4L9 355 aa16.96■□□□□ 0.31
MCF2L-218ENST00000442625 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.3
MCF2L-218ENST00000442625 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 PHF14O94880 888 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 RUFY3Q7L099 469 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 SSH2Q76I76 1423 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 HSPA4P34932 840 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-218ENST00000442625 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
MCF2L-218ENST00000442625 PYCARDQ9ULZ3 195 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 PTPRUQ92729 1446 aa16.95■□□□□ 0.3
MCF2L-218ENST00000442625 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-218ENST00000442625 SOS1Q07889 1333 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-218ENST00000442625 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
MCF2L-218ENST00000442625 CCDC94Q9BW85 323 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-218ENST00000442625 SPDYE4A6NLX3 237 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 STX6O43752 255 aa16.93■□□□□ 0.3
MCF2L-218ENST00000442625 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms