RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CHAMP1Q96JM3 812 aa20.02■□□□□ 0.8
SEMA3B-207ENST00000441915 KCNA6P17658 529 aa20.02■□□□□ 0.79
SEMA3B-207ENST00000441915 NUTM1Q86Y26 1132 aa20.02■□□□□ 0.79
SEMA3B-207ENST00000441915 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.79
SEMA3B-207ENST00000441915 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 UPF3BQ9BZI7 483 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 TMEM63CQ9P1W3 806 aa20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 RHPN1Q8TCX5 695 aa20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 MARF1Q9Y4F3 1742 aaKnown RBP20.01■□□□□ 0.79
SEMA3B-207ENST00000441915 SRGAP3O43295 1099 aa20■□□□□ 0.79
SEMA3B-207ENST00000441915 MSNP26038 577 aaKnown RBP20■□□□□ 0.79
SEMA3B-207ENST00000441915 POLA2Q14181 598 aa20■□□□□ 0.79
SEMA3B-207ENST00000441915 HSPA4P34932 840 aa20■□□□□ 0.79
SEMA3B-207ENST00000441915 KIF1BPQ96EK5 621 aa20■□□□□ 0.79
SEMA3B-207ENST00000441915 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
SEMA3B-207ENST00000441915 USP54Q70EL1 1684 aa19.99■□□□□ 0.79
SEMA3B-207ENST00000441915 SYCE3A1L190 88 aa19.99■□□□□ 0.79
SEMA3B-207ENST00000441915 HOXB7P09629 217 aa19.99■□□□□ 0.79
SEMA3B-207ENST00000441915 HS1BP3Q53T59 392 aa19.99■□□□□ 0.79
SEMA3B-207ENST00000441915 IL25Q9H293 177 aa19.98■□□□□ 0.79
SEMA3B-207ENST00000441915 NSFL1CQ9UNZ2 370 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-207ENST00000441915 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-207ENST00000441915 PI4K2BQ8TCG2 481 aa19.98■□□□□ 0.79
SEMA3B-207ENST00000441915 NBPF7P0C2Y1 421 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 MAP4K4O95819 1239 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 DNAAF4Q8WXU2 420 aa19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 IP6K1Q92551 441 aa19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 PDLIM2Q96JY6 352 aa19.97■□□□□ 0.79
SEMA3B-207ENST00000441915 HSP90AB4PQ58FF6 505 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 SGSM2O43147 1006 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 BEND3Q5T5X7 828 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
SEMA3B-207ENST00000441915 RAD50Q92878 1312 aa19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 PHF8Q9UPP1 1060 aa19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 NBPF6Q5VWK0 638 aa19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 SYAP1Q96A49 352 aaPredicted RBP19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 NBPF4Q96M43 638 aa19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 WDR33Q9C0J8 1336 aaKnown RBP19.95■□□□□ 0.78
SEMA3B-207ENST00000441915 LTN1O94822 1766 aa19.94■□□□□ 0.78
SEMA3B-207ENST00000441915 TEFQ10587 303 aa19.94■□□□□ 0.78
SEMA3B-207ENST00000441915 KIAA1211Q6ZU35 1233 aa19.93■□□□□ 0.78
SEMA3B-207ENST00000441915 MED1Q15648 1581 aaPredicted RBP19.92■□□□□ 0.78
SEMA3B-207ENST00000441915 BTBD11A6QL63 1104 aa19.92■□□□□ 0.78
SEMA3B-207ENST00000441915 PLEKHG5O94827 1062 aa19.92■□□□□ 0.78
SEMA3B-207ENST00000441915 NOL7Q9UMY1 257 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-207ENST00000441915 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-207ENST00000441915 SNX14Q9Y5W7 946 aa19.91■□□□□ 0.78
SEMA3B-207ENST00000441915 TTC41PQ6P2S7 1318 aa19.91■□□□□ 0.78
SEMA3B-207ENST00000441915 LSG1Q9H089 658 aaKnown RBP19.91■□□□□ 0.78
SEMA3B-207ENST00000441915 FOXD4L6Q3SYB3 417 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 AKAP4Q5JQC9 854 aa19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 CWC27Q6UX04 472 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 FOXD4L3Q6VB84 417 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 SETD1BQ9UPS6 1966 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 KCNQ3O43525 872 aa19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 GLRX3O76003 335 aaKnown RBP19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 FER1L4A9Z1Z3 1794 aa19.9■□□□□ 0.78
SEMA3B-207ENST00000441915 ANXA1P04083 346 aa19.89■□□□□ 0.78
SEMA3B-207ENST00000441915 CLASRPQ8N2M8 674 aaKnown RBP19.89■□□□□ 0.78
SEMA3B-207ENST00000441915 KCNH5Q8NCM2 988 aa19.89■□□□□ 0.78
SEMA3B-207ENST00000441915 DBF4Q9UBU7 674 aaPredicted RBP19.89■□□□□ 0.78
SEMA3B-207ENST00000441915 ZBTB7CA1YPR0 619 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 PHF14O94880 888 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 ZNF530Q6P9A1 599 aaPredicted RBP19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 KDM3BQ7LBC6 1761 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 USP42Q9H9J4 1324 aaKnown RBP19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 OFD1O75665 1012 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 TPM2P07951 284 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 PLEKHO1Q53GL0 409 aaPredicted RBP19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 TTC14Q96N46 770 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 GDPD2Q9HCC8 539 aa19.89■□□□□ 0.77
SEMA3B-207ENST00000441915 MTX1Q13505 466 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 RNF214Q8ND24 703 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 ADCY9O60503 1353 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 AK2P54819 239 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 USP48Q86UV5 1035 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 RUFY2Q8WXA3 655 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 LIMCH1Q9UPQ0 1083 aa19.88■□□□□ 0.77
SEMA3B-207ENST00000441915 NFAT5O94916 1531 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 PSME1Q06323 249 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 RASEFQ8IZ41 740 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 DIAPH3Q9NSV4 1193 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 C9orf78Q9NZ63 289 aaPredicted RBP19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 SPG7Q9UQ90 795 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 HDAC5Q9UQL6 1122 aa19.87■□□□□ 0.77
SEMA3B-207ENST00000441915 AMOTQ4VCS5 1084 aa19.86■□□□□ 0.77
SEMA3B-207ENST00000441915 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-207ENST00000441915 GADD45BO75293 160 aaPredicted RBP19.86■□□□□ 0.77
SEMA3B-207ENST00000441915 ZNF500O60304 480 aaPredicted RBP19.85■□□□□ 0.77
SEMA3B-207ENST00000441915 C1orf141Q5JVX7 400 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms