RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
MCF2L-217ENST00000441756 RBM42Q9BTD8 480 aaKnown RBP20.25■□□□□ 0.83
MCF2L-217ENST00000441756 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
MCF2L-217ENST00000441756 RGS12O14924 1447 aa20.25■□□□□ 0.83
MCF2L-217ENST00000441756 PALLDQ8WX93 1383 aa20.24■□□□□ 0.83
MCF2L-217ENST00000441756 TRIM27P14373 513 aa20.24■□□□□ 0.83
MCF2L-217ENST00000441756 CHPF2Q9P2E5 772 aa20.24■□□□□ 0.83
MCF2L-217ENST00000441756 RGS17Q9UGC6 210 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-217ENST00000441756 SBF2Q86WG5 1849 aa20.23■□□□□ 0.83
MCF2L-217ENST00000441756 DDX21Q9NR30 783 aaKnown RBP eCLIP20.23■□□□□ 0.83
MCF2L-217ENST00000441756 BTAF1O14981 1849 aa20.23■□□□□ 0.83
MCF2L-217ENST00000441756 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
MCF2L-217ENST00000441756 KCNQ2O43526 872 aa20.22■□□□□ 0.83
MCF2L-217ENST00000441756 STARD3NLO95772 234 aa20.22■□□□□ 0.83
MCF2L-217ENST00000441756 FLIIQ13045 1269 aa20.22■□□□□ 0.83
MCF2L-217ENST00000441756 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
MCF2L-217ENST00000441756 POTEAQ6S8J7 498 aa20.21■□□□□ 0.83
MCF2L-217ENST00000441756 BCL11BQ9C0K0 894 aaPredicted RBP20.21■□□□□ 0.83
MCF2L-217ENST00000441756 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
MCF2L-217ENST00000441756 AAMPQ13685 434 aa20.2■□□□□ 0.82
MCF2L-217ENST00000441756 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
MCF2L-217ENST00000441756 C20orf194Q5TEA3 1177 aa20.2■□□□□ 0.82
MCF2L-217ENST00000441756 CHMP4BQ9H444 224 aaKnown RBP20.2■□□□□ 0.82
MCF2L-217ENST00000441756 ABCC4O15439 1325 aa20.2■□□□□ 0.82
MCF2L-217ENST00000441756 TJP1Q07157 1748 aa20.19■□□□□ 0.82
MCF2L-217ENST00000441756 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
MCF2L-217ENST00000441756 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
MCF2L-217ENST00000441756 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-217ENST00000441756 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
MCF2L-217ENST00000441756 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
MCF2L-217ENST00000441756 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
MCF2L-217ENST00000441756 SIK1P57059 783 aa20.18■□□□□ 0.82
MCF2L-217ENST00000441756 PANK1Q8TE04 598 aa20.18■□□□□ 0.82
MCF2L-217ENST00000441756 MVPQ14764 893 aaKnown RBP20.17■□□□□ 0.82
MCF2L-217ENST00000441756 G2E3Q7L622 706 aa20.17■□□□□ 0.82
MCF2L-217ENST00000441756 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
MCF2L-217ENST00000441756 DDX19BQ9UMR2 479 aa20.17■□□□□ 0.82
MCF2L-217ENST00000441756 HMGB2P26583 209 aaKnown RBP20.16■□□□□ 0.82
MCF2L-217ENST00000441756 ATP6V1AP38606 617 aa20.16■□□□□ 0.82
MCF2L-217ENST00000441756 ITPRIPQ8IWB1 547 aa20.16■□□□□ 0.82
MCF2L-217ENST00000441756 EXOC6Q8TAG9 804 aa20.16■□□□□ 0.82
MCF2L-217ENST00000441756 COG6Q9Y2V7 657 aa20.16■□□□□ 0.82
MCF2L-217ENST00000441756 RLBP1P12271 317 aa20.15■□□□□ 0.82
MCF2L-217ENST00000441756 MYL6BP14649 208 aa20.15■□□□□ 0.82
MCF2L-217ENST00000441756 PDIA6Q15084 440 aa20.15■□□□□ 0.82
MCF2L-217ENST00000441756 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
MCF2L-217ENST00000441756 CYP19A1P11511 503 aaPredicted RBP20.14■□□□□ 0.81
MCF2L-217ENST00000441756 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
MCF2L-217ENST00000441756 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.81
MCF2L-217ENST00000441756 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.81
MCF2L-217ENST00000441756 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
MCF2L-217ENST00000441756 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
MCF2L-217ENST00000441756 LY75O60449 1722 aa20.13■□□□□ 0.81
MCF2L-217ENST00000441756 ANXA1P04083 346 aa20.13■□□□□ 0.81
MCF2L-217ENST00000441756 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
MCF2L-217ENST00000441756 SLC4A9Q96Q91 983 aa20.13■□□□□ 0.81
MCF2L-217ENST00000441756 INTS3Q68E01 1043 aaKnown RBP20.12■□□□□ 0.81
MCF2L-217ENST00000441756 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
MCF2L-217ENST00000441756 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
MCF2L-217ENST00000441756 RREB1Q92766 1687 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 A1BGP04217 495 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 DNAAF4Q8WXU2 420 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
MCF2L-217ENST00000441756 NBPF26B4DH59 902 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 TRIM37O94972 964 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 NBPF14Q5TI25 921 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 NBPF10Q6P3W6 841 aaKnown RBP20.1■□□□□ 0.81
MCF2L-217ENST00000441756 SLC4A10Q6U841 1118 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 NBPF15Q8N660 670 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 CCNL1Q9UK58 526 aaPredicted RBP20.1■□□□□ 0.81
MCF2L-217ENST00000441756 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
MCF2L-217ENST00000441756 PI4KAP2A4QPH2 592 aa20.09■□□□□ 0.81
MCF2L-217ENST00000441756 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
MCF2L-217ENST00000441756 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
MCF2L-217ENST00000441756 PTF1AQ7RTS3 328 aa20.09■□□□□ 0.81
MCF2L-217ENST00000441756 LRP10Q7Z4F1 713 aa20.09■□□□□ 0.81
MCF2L-217ENST00000441756 PI4KAP1Q8N8J0 262 aa20.09■□□□□ 0.81
MCF2L-217ENST00000441756 ADCY9O60503 1353 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 F6X3S4 739 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-217ENST00000441756 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
MCF2L-217ENST00000441756 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 ITPK1Q13572 414 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 SLC27A3Q5K4L6 730 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 RIC3Q7Z5B4 369 aa20.08■□□□□ 0.81
MCF2L-217ENST00000441756 CNTNAP4Q9C0A0 1308 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 ANKRD13DQ6ZTN6 518 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 PLBD2Q8NHP8 589 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 SRCIN1Q9C0H9 1055 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 MAP3K2Q9Y2U5 619 aa20.07■□□□□ 0.8
MCF2L-217ENST00000441756 PIP4K2AP48426 406 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-217ENST00000441756 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
MCF2L-217ENST00000441756 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-217ENST00000441756 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
MCF2L-217ENST00000441756 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
MCF2L-217ENST00000441756 CCDC136Q96JN2 1154 aa20.05■□□□□ 0.8
MCF2L-217ENST00000441756 ZNF330Q9Y3S2 320 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms