RNA–Protein interactions for RNA: ENST00000441657.1

SP140-206, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-206ENST00000441657 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
SP140-206ENST00000441657 TAF1DQ9H5J8 278 aaPredicted RBP8.91□□□□□ -0.98
SP140-206ENST00000441657 EAPPQ56P03 285 aaPredicted RBP8.9□□□□□ -0.98
SP140-206ENST00000441657 MPRIPQ6WCQ1 1025 aa8.9□□□□□ -0.98
SP140-206ENST00000441657 CABP1Q9NZU7 370 aa8.9□□□□□ -0.98
SP140-206ENST00000441657 TTC21BQ7Z4L5 1316 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 NFKBIEO00221 500 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 RGL2O15211 777 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 AOC2O75106 756 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 GYS1P13807 737 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
SP140-206ENST00000441657 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
SP140-206ENST00000441657 A0A0C4DFX4 3053 aa8.88□□□□□ -0.99
SP140-206ENST00000441657 LOC102724428A0A0B4J2F2 783 aa8.88□□□□□ -0.99
SP140-206ENST00000441657 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
SP140-206ENST00000441657 SIK1P57059 783 aa8.88□□□□□ -0.99
SP140-206ENST00000441657 MIER1Q8N108 512 aa8.88□□□□□ -0.99
SP140-206ENST00000441657 DDX21Q9NR30 783 aaKnown RBP eCLIP8.88□□□□□ -0.99
SP140-206ENST00000441657 RTCBQ9Y3I0 505 aaKnown RBP8.88□□□□□ -0.99
SP140-206ENST00000441657 SCN4AP35499 1836 aa8.88□□□□□ -0.99
SP140-206ENST00000441657 DICER1Q9UPY3 1922 aaKnown RBP8.88□□□□□ -0.99
SP140-206ENST00000441657 TTC21AQ8NDW8 1320 aa8.87□□□□□ -0.99
SP140-206ENST00000441657 MAP1SQ66K74 1059 aaPredicted RBP8.87□□□□□ -0.99
SP140-206ENST00000441657 TTLL6Q8N841 843 aa8.87□□□□□ -0.99
SP140-206ENST00000441657 L3MBTL3Q96JM7 780 aaPredicted RBP8.87□□□□□ -0.99
SP140-206ENST00000441657 CABP2Q9NPB3 220 aa8.87□□□□□ -0.99
SP140-206ENST00000441657 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
SP140-206ENST00000441657 RFC4P35249 363 aa8.86□□□□□ -0.99
SP140-206ENST00000441657 ARHGEF1Q92888 912 aaKnown RBP8.86□□□□□ -0.99
SP140-206ENST00000441657 ITPK1Q13572 414 aa8.85□□□□□ -0.99
SP140-206ENST00000441657 PNMA8AQ86V59 439 aaPredicted RBP8.85□□□□□ -0.99
SP140-206ENST00000441657 HACL1Q9UJ83 578 aa8.85□□□□□ -0.99
SP140-206ENST00000441657 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
SP140-206ENST00000441657 TLL2Q9Y6L7 1015 aa8.85□□□□□ -0.99
SP140-206ENST00000441657 EPHX2P34913 555 aa8.84□□□□□ -0.99
SP140-206ENST00000441657 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
SP140-206ENST00000441657 TPRNQ4KMQ1 711 aa8.84□□□□□ -0.99
SP140-206ENST00000441657 CIAPIN1Q6FI81 312 aa8.84□□□□□ -0.99
SP140-206ENST00000441657 LTV1Q96GA3 475 aaPredicted RBP8.84□□□□□ -0.99
SP140-206ENST00000441657 ZBTB47Q9UFB7 747 aaPredicted RBP8.84□□□□□ -0.99
SP140-206ENST00000441657 HPS5Q9UPZ3 1129 aa8.84□□□□□ -0.99
SP140-206ENST00000441657 MAP2P11137 1827 aaKnown RBP8.84□□□□□ -0.99
SP140-206ENST00000441657 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
SP140-206ENST00000441657 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
SP140-206ENST00000441657 DDR1Q08345 913 aa8.83□□□□□ -1
SP140-206ENST00000441657 CTU1Q7Z7A3 348 aaKnown RBP8.83□□□□□ -1
SP140-206ENST00000441657 PIGBQ92521 554 aa8.83□□□□□ -1
SP140-206ENST00000441657 COLQQ9Y215 455 aaPredicted RBP8.83□□□□□ -1
SP140-206ENST00000441657 LTN1O94822 1766 aa8.83□□□□□ -1
SP140-206ENST00000441657 ADAMTSL1Q8N6G6 1762 aa8.83□□□□□ -1
SP140-206ENST00000441657 SZT2Q5T011 3432 aa8.83□□□□□ -1
SP140-206ENST00000441657 MEGF6O75095 1541 aa8.82□□□□□ -1
SP140-206ENST00000441657 CST9Q5W186 159 aa8.82□□□□□ -1
SP140-206ENST00000441657 IP6K1Q92551 441 aa8.82□□□□□ -1
SP140-206ENST00000441657 FAM208AQ9UK61 1670 aaKnown RBP8.81□□□□□ -1
SP140-206ENST00000441657 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
SP140-206ENST00000441657 MPNDQ8N594 471 aa8.81□□□□□ -1
SP140-206ENST00000441657 HHIPL1Q96JK4 782 aa8.81□□□□□ -1
SP140-206ENST00000441657 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
SP140-206ENST00000441657 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
SP140-206ENST00000441657 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
SP140-206ENST00000441657 ITGB4P16144 1822 aa8.8□□□□□ -1
SP140-206ENST00000441657 RPS6KA4O75676 772 aa8.8□□□□□ -1
SP140-206ENST00000441657 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
SP140-206ENST00000441657 PKN2Q16513 984 aaKnown RBP8.8□□□□□ -1
SP140-206ENST00000441657 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
SP140-206ENST00000441657 MPHOSPH9Q99550 1183 aa8.8□□□□□ -1
SP140-206ENST00000441657 TAOK3Q9H2K8 898 aa8.8□□□□□ -1
SP140-206ENST00000441657 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
SP140-206ENST00000441657 SAGE1Q9NXZ1 904 aa8.8□□□□□ -1
SP140-206ENST00000441657 CIZ1Q9ULV3 898 aaPredicted RBP8.8□□□□□ -1
SP140-206ENST00000441657 TRPM7Q96QT4 1865 aa8.8□□□□□ -1
SP140-206ENST00000441657 SMG6Q86US8 1419 aaKnown RBP8.8□□□□□ -1
SP140-206ENST00000441657 USP31Q70CQ4 1352 aa8.79□□□□□ -1
SP140-206ENST00000441657 H0YIN7 160 aa8.79□□□□□ -1
SP140-206ENST00000441657 POLRMTO00411 1230 aaKnown RBP8.79□□□□□ -1
SP140-206ENST00000441657 NOGQ13253 232 aa8.79□□□□□ -1
SP140-206ENST00000441657 SAPCD2Q86UD0 394 aa8.79□□□□□ -1
SP140-206ENST00000441657 RAPGEF4Q8WZA2 1011 aa8.79□□□□□ -1
SP140-206ENST00000441657 CD163L1Q9NR16 1453 aa8.78□□□□□ -1
SP140-206ENST00000441657 C21orf2O43822 256 aa8.78□□□□□ -1
SP140-206ENST00000441657 TM4SF1P30408 202 aa8.78□□□□□ -1
SP140-206ENST00000441657 C2CD5Q86YS7 1000 aa8.78□□□□□ -1
SP140-206ENST00000441657 STAC3Q96MF2 364 aa8.78□□□□□ -1
SP140-206ENST00000441657 ASAP1Q9ULH1 1129 aa8.78□□□□□ -1
SP140-206ENST00000441657 FER1L6Q2WGJ9 1857 aa8.78□□□□□ -1
SP140-206ENST00000441657 CEP290O15078 2479 aa8.77□□□□□ -1.01
SP140-206ENST00000441657 DLEC1Q9Y238 1755 aa8.77□□□□□ -1.01
SP140-206ENST00000441657 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
SP140-206ENST00000441657 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
SP140-206ENST00000441657 COL25A1Q9BXS0 654 aaPredicted RBP8.77□□□□□ -1.01
SP140-206ENST00000441657 SRP68Q9UHB9 627 aaKnown RBP8.77□□□□□ -1.01
SP140-206ENST00000441657 MAP3K19Q56UN5 1328 aa8.77□□□□□ -1.01
SP140-206ENST00000441657 INSRP06213 1382 aa8.76□□□□□ -1.01
SP140-206ENST00000441657 CYP27B1O15528 508 aa8.76□□□□□ -1.01
SP140-206ENST00000441657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.76□□□□□ -1.01
SP140-206ENST00000441657 ZIC5Q96T25 663 aa8.76□□□□□ -1.01
SP140-206ENST00000441657 RNF123Q5XPI4 1314 aa8.76□□□□□ -1.01
SP140-206ENST00000441657 CNTNAP4Q9C0A0 1308 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms